RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 STAT5BP51692 787 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 ZNF211Q13398 564 aaPredicted RBP14.01□□□□□ -0.17
GARNL3-220ENST00000496711 CAPSQ13938 189 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 MESDQ14696 234 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 WDR44Q5JSH3 913 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 NAA35Q5VZE5 725 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 LMBRD2Q68DH5 695 aaPredicted RBP14.01□□□□□ -0.17
GARNL3-220ENST00000496711 METTL7BQ6UX53 244 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 ERO1BQ86YB8 467 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 ELMO3Q96BJ8 720 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 FAM84AQ96KN4 292 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 FAM167AQ96KS9 214 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 MPHOSPH6Q99547 160 aaKnown RBP14.01□□□□□ -0.17
GARNL3-220ENST00000496711 MSTO1Q9BUK6 570 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 HAPLN2Q9GZV7 340 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 ASCC2Q9H1I8 757 aaPredicted RBP14.01□□□□□ -0.17
GARNL3-220ENST00000496711 TMEM134Q9H6X4 195 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 RBAKQ9NYW8 714 aaPredicted RBP14.01□□□□□ -0.17
GARNL3-220ENST00000496711 ANKFY1Q9P2R3 1169 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 UVRAGQ9P2Y5 699 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 TRPC6Q9Y210 931 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 PPME1Q9Y570 386 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 ZSWIM8A7E2V4 1837 aa14.01□□□□□ -0.17
GARNL3-220ENST00000496711 TTI1O43156 1089 aa14□□□□□ -0.17
GARNL3-220ENST00000496711 CNMDO75829 334 aa14□□□□□ -0.17
GARNL3-220ENST00000496711 SLC25A27O95847 323 aa14□□□□□ -0.17
GARNL3-220ENST00000496711 C4BPAP04003 597 aaKnown RBP14□□□□□ -0.17
GARNL3-220ENST00000496711 HSPA6P17066 643 aa14□□□□□ -0.17
GARNL3-220ENST00000496711 COMTP21964 271 aa14□□□□□ -0.17
GARNL3-220ENST00000496711 WNT7BP56706 349 aa14□□□□□ -0.17
GARNL3-220ENST00000496711 BIRC3Q13489 604 aa14□□□□□ -0.17
GARNL3-220ENST00000496711 CLEC16AQ2KHT3 1053 aa14□□□□□ -0.17
GARNL3-220ENST00000496711 TDRD10Q5VZ19 366 aaKnown RBP14□□□□□ -0.17
GARNL3-220ENST00000496711 ACAD10Q6JQN1 1059 aa14□□□□□ -0.17
GARNL3-220ENST00000496711 CRELD2Q6UXH1 353 aaPredicted RBP14□□□□□ -0.17
GARNL3-220ENST00000496711 LEKR1Q6ZMV7 388 aa14□□□□□ -0.17
GARNL3-220ENST00000496711 SEPT1Q8WYJ6 367 aa14□□□□□ -0.17
GARNL3-220ENST00000496711 SEC14L1Q92503 715 aa14□□□□□ -0.17
GARNL3-220ENST00000496711 TARS2Q9BW92 718 aaKnown RBP14□□□□□ -0.17
GARNL3-220ENST00000496711 WNT8AQ9H1J5 351 aa14□□□□□ -0.17
GARNL3-220ENST00000496711 PTPRJQ12913 1337 aa14□□□□□ -0.17
GARNL3-220ENST00000496711 A0A0B4J269 797 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 SPDYE5A6NIY4 337 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 CXCL11O14625 94 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 MAFO75444 373 aaPredicted RBP13.99□□□□□ -0.17
GARNL3-220ENST00000496711 COPB2P35606 906 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 ACTN2P35609 894 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 MARCKSL1P49006 195 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 POU5F1Q01860 360 aaKnown RBP13.99□□□□□ -0.17
GARNL3-220ENST00000496711 SEL1L2Q5TEA6 688 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.99□□□□□ -0.17
GARNL3-220ENST00000496711 ZNF677Q86XU0 584 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 ANKRD13AQ8IZ07 590 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 IQCKQ8N0W5 287 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 KRT35Q92764 455 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 CD101Q93033 1021 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 ZBTB45Q96K62 511 aaPredicted RBP13.99□□□□□ -0.17
GARNL3-220ENST00000496711 CGRRF1Q99675 332 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 RAB17Q9H0T7 212 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 FAM114A2Q9NRY5 505 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 RNF181Q9P0P0 153 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 CHORDC1Q9UHD1 332 aaPredicted RBP13.99□□□□□ -0.17
GARNL3-220ENST00000496711 AGTPBP1Q9UPW5 1226 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 UTP11Q9Y3A2 253 aaKnown RBP13.99□□□□□ -0.17
GARNL3-220ENST00000496711 ANK1P16157 1881 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 PLXNA1Q9UIW2 1896 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 ADGRA2Q96PE1 1338 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 ADCY3O60266 1144 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 GRIN3BO60391 1043 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 EDN1P05305 212 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 CTNNA2P26232 953 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 CTNNA1P35221 906 aaKnown RBP13.99□□□□□ -0.17
GARNL3-220ENST00000496711 BPIFB4P59827 614 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 EEPD1Q7L9B9 569 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 DDX42Q86XP3 938 aaKnown RBP eCLIP13.99□□□□□ -0.17
GARNL3-220ENST00000496711 CD302Q8IX05 232 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 LRRC45Q96CN5 670 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 CLMNQ96JQ2 1002 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 CELF4Q9BZC1 486 aaKnown RBP13.99□□□□□ -0.17
GARNL3-220ENST00000496711 AZI2Q9H6S1 392 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 ERVK-5Q9HDB9 667 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.99□□□□□ -0.17
GARNL3-220ENST00000496711 CNOT8Q9UFF9 292 aaKnown RBP13.99□□□□□ -0.17
GARNL3-220ENST00000496711 NR2E1Q9Y466 385 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 PCDHB2Q9Y5E7 798 aa13.99□□□□□ -0.17
GARNL3-220ENST00000496711 DAPK3O43293 454 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 SPOPO43791 374 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 VNN1O95497 513 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 NF2P35240 595 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 PEX5P50542 639 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 DR1Q01658 176 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 DHX34Q14147 1143 aaKnown RBP13.98□□□□□ -0.17
GARNL3-220ENST00000496711 LY6KQ17RY6 165 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 TTMPQ5BVD1 217 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 ZBTB41Q5SVQ8 909 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 KCNV1Q6PIU1 500 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 ZPBP2Q6X784 338 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 PIK3R5Q8WYR1 880 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 TRIM11Q96F44 468 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 NEUROG2Q9H2A3 272 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms