RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 TRIM10Q9UDY6 481 aa12.42□□□□□ -0.42
HDLBP-245ENST00000494862 GABRQQ9UN88 632 aa12.42□□□□□ -0.42
HDLBP-245ENST00000494862 DOCK3Q8IZD9 2030 aa12.42□□□□□ -0.42
HDLBP-245ENST00000494862 ATP8B3O60423 1300 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 A0A087X0T9 212 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 UQCRHLA0A096LP55 91 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 SMIM35A0A1B0GVV1 85 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 MBLAC1A4D2B0 266 aaPredicted RBP12.41□□□□□ -0.42
HDLBP-245ENST00000494862 TULP1O00294 542 aaPredicted RBP12.41□□□□□ -0.42
HDLBP-245ENST00000494862 FOXN3O00409 490 aaPredicted RBP12.41□□□□□ -0.42
HDLBP-245ENST00000494862 UQCRHP07919 91 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 FAM228BP0C875 321 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 PNMA6AP0CW24 399 aaPredicted RBP12.41□□□□□ -0.42
HDLBP-245ENST00000494862 CYBAP13498 195 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 GTF2F1P35269 517 aaKnown RBP eCLIP12.41□□□□□ -0.42
HDLBP-245ENST00000494862 FLT3LGP49771 235 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 MFAP3P55082 362 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 WNT7BP56706 349 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 GJA9P57773 515 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 POU5F1Q01860 360 aaKnown RBP12.41□□□□□ -0.42
HDLBP-245ENST00000494862 KIF22Q14807 665 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 FSCN1Q16658 493 aaKnown RBP12.41□□□□□ -0.42
HDLBP-245ENST00000494862 TMEM132AQ24JP5 1023 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 ZNF568Q3ZCX4 644 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 EEF1DP3Q658K8 133 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 ENOSF1Q7L5Y1 443 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 HELQQ8TDG4 1101 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 LMBR1Q8WVP7 490 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 NLRP7Q8WX94 980 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 KREMEN1Q96MU8 473 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 CFHR5Q9BXR6 569 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 ADAMTS1Q9UHI8 967 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 CPSF3Q9UKF6 684 aaKnown RBP12.41□□□□□ -0.42
HDLBP-245ENST00000494862 NENFQ9UMX5 172 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 TFR2Q9UP52 801 aa12.41□□□□□ -0.42
HDLBP-245ENST00000494862 CTAGE9A4FU28 777 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 B4GALT5O43286 388 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 LRRN2O75325 713 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 URI1O94763 535 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-245ENST00000494862 TBC1D8O95759 1140 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 HLA-DRAP01903 254 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 IQCF3P0C7M6 154 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 MCF2P10911 925 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 CYP2C9P11712 490 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 NKX3-2P78367 333 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 IRX5P78411 483 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-245ENST00000494862 ADAM17P78536 824 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 BEX3Q00994 111 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 SP3Q02447 781 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 PRKCZQ05513 592 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 TUBB2AQ13885 445 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 BMS1Q14692 1282 aaKnown RBP12.4□□□□□ -0.42
HDLBP-245ENST00000494862 NAB2Q15742 525 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 KYAT1Q16773 422 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 TDRD10Q5VZ19 366 aaKnown RBP12.4□□□□□ -0.42
HDLBP-245ENST00000494862 WDR49Q8IV35 697 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 TRIB2Q92519 343 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 SHC3Q92529 594 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 SECISBP2LQ93073 1101 aaKnown RBP12.4□□□□□ -0.42
HDLBP-245ENST00000494862 SYT11Q9BT88 431 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 TUBB2BQ9BVA1 445 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 UPF3AQ9H1J1 476 aaKnown RBP12.4□□□□□ -0.42
HDLBP-245ENST00000494862 CDT1Q9H211 546 aa12.4□□□□□ -0.42
HDLBP-245ENST00000494862 DDX3XO00571 662 aaKnown RBP eCLIP12.39□□□□□ -0.43
HDLBP-245ENST00000494862 IL18RAPO95256 599 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 SLU7O95391 586 aaKnown RBP12.39□□□□□ -0.43
HDLBP-245ENST00000494862 VNN1O95497 513 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 GNAT1P11488 350 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 TNFAIP3P21580 790 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 TNFSF9P41273 254 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 PIK3CAP42336 1068 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 PURAQ00577 322 aaKnown RBP12.39□□□□□ -0.43
HDLBP-245ENST00000494862 GCNT1Q02742 428 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 BIRC3Q13489 604 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 SEZ6Q53EL9 994 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 WDR44Q5JSH3 913 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 LMBRD2Q68DH5 695 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-245ENST00000494862 ALKBH5Q6P6C2 394 aaKnown RBP12.39□□□□□ -0.43
HDLBP-245ENST00000494862 FAM71AQ8IYT1 594 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 ZNF710Q8N1W2 664 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 PPM1KQ8N3J5 372 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 RNF10Q8N5U6 811 aaKnown RBP12.39□□□□□ -0.43
HDLBP-245ENST00000494862 SLC30A5Q8TAD4 765 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 KAT5Q92993 513 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 TATDN2Q93075 761 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 SCLT1Q96NL6 688 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 NAPGQ99747 312 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-245ENST00000494862 MTG1Q9BT17 334 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-245ENST00000494862 GCOM2Q9BZD3 368 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-245ENST00000494862 ADAMTS10Q9H324 1103 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 PDZD7Q9H5P4 517 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 RPF1Q9H9Y2 349 aaKnown RBP12.39□□□□□ -0.43
HDLBP-245ENST00000494862 SPC25Q9HBM1 224 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 NAGPAQ9UK23 515 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 INTUQ9ULD6 942 aa12.39□□□□□ -0.43
HDLBP-245ENST00000494862 PTPRJQ12913 1337 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 C17orf102A2RUQ5 167 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 BTNL10A8MVZ5 291 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 GPR25O00155 361 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 SEPT4O43236 478 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms