RNA–Protein interactions for RNA: ENST00000494276.1

ZNF561-219, Transcript of zinc finger protein 561, human

TSL 3

Gene ZNF561, Length 568 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF561-219	ENST00000494276	BTNL9	Q6UXG8	535 aa		4.55	□□□□□ -1.68
ZNF561-219	ENST00000494276	MIGA2	Q7L4E1	593 aa		4.55	□□□□□ -1.68
ZNF561-219	ENST00000494276	KCNK18	Q7Z418	384 aa		4.55	□□□□□ -1.68
ZNF561-219	ENST00000494276	EXOC8	Q8IYI6	725 aa		4.55	□□□□□ -1.68
ZNF561-219	ENST00000494276	MYO1H	Q8N1T3	1032 aa		4.55	□□□□□ -1.68
ZNF561-219	ENST00000494276	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.55	□□□□□ -1.68
ZNF561-219	ENST00000494276	ZNF622	Q969S3	477 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
ZNF561-219	ENST00000494276	LENG9	Q96B70	501 aa		4.55	□□□□□ -1.68
ZNF561-219	ENST00000494276	UHRF1	Q96T88	793 aa	Predicted RBP	4.55	□□□□□ -1.68
ZNF561-219	ENST00000494276	OSBPL6	Q9BZF3	934 aa		4.55	□□□□□ -1.68
ZNF561-219	ENST00000494276	CDH19	Q9H159	772 aa		4.55	□□□□□ -1.68
ZNF561-219	ENST00000494276	C14orf93	Q9H972	538 aa	Known RBP	4.55	□□□□□ -1.68
ZNF561-219	ENST00000494276	TMPRSS11E	Q9UL52	423 aa		4.55	□□□□□ -1.68
ZNF561-219	ENST00000494276	NOB1	Q9ULX3	412 aa	Known RBP	4.55	□□□□□ -1.68
ZNF561-219	ENST00000494276	COX11	Q9Y6N1	276 aa		4.55	□□□□□ -1.68
ZNF561-219	ENST00000494276	PMS2P1	A4D2B8	440 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	KIAA0355	O15063	1070 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	AKR1B10	O60218	316 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	PCDHGA12	O60330	932 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	PHF2	O75151	1096 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	PPFIA4	O75335	1185 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	PARN	O95453	639 aa	Known RBP	4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	GSPT1	P15170	499 aa	Known RBP	4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	ATF3	P18847	181 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	CYP2C19	P33261	490 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	MEF2A	Q02078	507 aa	Predicted RBP	4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	TOB2	Q14106	344 aa	Predicted RBP	4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	NOMO1	Q15155	1222 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	ADRM1	Q16186	407 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	OLFML1	Q6UWY5	402 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	RD3	Q7Z3Z2	195 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	RAVER1	Q8IY67	606 aa	Known RBP	4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	UNC5B	Q8IZJ1	945 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	OR14K1	Q8NGZ2	314 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	PROKR1	Q8TCW9	393 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	TSPEAR	Q8WU66	669 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	MIEF2	Q96C03	454 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	LRGUK	Q96M69	825 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	CAMKK2	Q96RR4	588 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	PCGF6	Q9BYE7	350 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	EPC1	Q9H2F5	836 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	TOR3A	Q9H497	397 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	GREM2	Q9H772	168 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	ZNF277	Q9NRM2	450 aa	Predicted RBP	4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	NCDN	Q9UBB6	729 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	RCAN3	Q9UKA8	241 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	LAS1L	Q9Y4W2	734 aa	Known RBP	4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	PCDHGA8	Q9Y5G5	932 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	PCDHGA7	Q9Y5G6	932 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	PCDHGA6	Q9Y5G7	932 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	PCDHGA3	Q9Y5H0	932 aa		4.54	□□□□□ -1.68
ZNF561-219	ENST00000494276	RPTOR	Q8N122	1335 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	PLEKHD1	A6NEE1	506 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	FAM171A2	A8MVW0	826 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	TSPAN6	O43657	245 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	B3GALT2	O43825	422 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	SEC24D	O94855	1032 aa	Predicted RBP	4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	ABLIM3	O94929	683 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	LY86	O95711	162 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	LTA4H	P09960	611 aa	Known RBP	4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	HSPA6	P17066	643 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	C5AR1	P21730	350 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	ECHS1	P30084	290 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	ADK	P55263	362 aa	Known RBP	4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	BPIFB4	P59827	614 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	CD69	Q07108	199 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	TCIRG1	Q13488	830 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	ODF1	Q14990	250 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	IFIT1B	Q5T764	474 aa	Known RBP	4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	TRIM68	Q6AZZ1	485 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	PPP4R4	Q6NUP7	873 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	NOL8	Q76FK4	1167 aa	Known RBP	4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	LYSMD2	Q8IV50	215 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	CMTR2	Q8IYT2	770 aa	Known RBP	4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	PLA2G15	Q8NCC3	412 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	HDAC10	Q969S8	669 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	NUP88	Q99567	741 aa	Predicted RBP	4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	C7orf25	Q9BPX7	421 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	HAPLN2	Q9GZV7	340 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	PRDM12	Q9H4Q4	367 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	RBM12	Q9NTZ6	932 aa	Known RBP	4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	INTU	Q9ULD6	942 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	SH3BP1	Q9Y3L3	701 aa		4.53	□□□□□ -1.68
ZNF561-219	ENST00000494276	FZD9	O00144	591 aa		4.52	□□□□□ -1.69
ZNF561-219	ENST00000494276	NRP1	O14786	923 aa		4.52	□□□□□ -1.69
ZNF561-219	ENST00000494276	FAM20B	O75063	409 aa		4.52	□□□□□ -1.69
ZNF561-219	ENST00000494276	OFD1	O75665	1012 aa		4.52	□□□□□ -1.69
ZNF561-219	ENST00000494276	RFPL1	O75677	317 aa		4.52	□□□□□ -1.69
ZNF561-219	ENST00000494276	ALDH1A2	O94788	518 aa		4.52	□□□□□ -1.69
ZNF561-219	ENST00000494276	ABHD16A	O95870	558 aa		4.52	□□□□□ -1.69
ZNF561-219	ENST00000494276	GAA	P10253	952 aa		4.52	□□□□□ -1.69
ZNF561-219	ENST00000494276	ADSL	P30566	484 aa	Predicted RBP	4.52	□□□□□ -1.69
ZNF561-219	ENST00000494276	DUSP2	Q05923	314 aa		4.52	□□□□□ -1.69
ZNF561-219	ENST00000494276	MLC1	Q15049	377 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms