RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 PTPRHQ9HD43 1115 aa9.39□□□□□ -0.91
LRCH3-219ENST00000494069 KMT5AQ9NQR1 393 aa9.39□□□□□ -0.91
LRCH3-219ENST00000494069 MAN1C1Q9NR34 630 aa9.39□□□□□ -0.91
LRCH3-219ENST00000494069 DZANK1Q9NVP4 752 aa9.39□□□□□ -0.91
LRCH3-219ENST00000494069 ARHGAP28Q9P2N2 729 aa9.39□□□□□ -0.91
LRCH3-219ENST00000494069 ADAM28Q9UKQ2 775 aa9.39□□□□□ -0.91
LRCH3-219ENST00000494069 TNFSF13BQ9Y275 285 aa9.39□□□□□ -0.91
LRCH3-219ENST00000494069 PHLPP2Q6ZVD8 1323 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 VPS37CA5D8V6 355 aaPredicted RBP9.38□□□□□ -0.91
LRCH3-219ENST00000494069 TMEM221A6NGB7 291 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 M0R296 226 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 ADAM12O43184 909 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 RFPL2O75678 378 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 THP07101 528 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 ASGR2P07307 311 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 HARSP12081 509 aaKnown RBP9.38□□□□□ -0.91
LRCH3-219ENST00000494069 GUCY2CP25092 1073 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 MTHFRP42898 656 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 SOX4Q06945 474 aaPredicted RBP9.38□□□□□ -0.91
LRCH3-219ENST00000494069 DMP1Q13316 513 aaPredicted RBP9.38□□□□□ -0.91
LRCH3-219ENST00000494069 SF3A1Q15459 793 aaKnown RBP9.38□□□□□ -0.91
LRCH3-219ENST00000494069 PTPN21Q16825 1174 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 DCAF4L1Q3SXM0 396 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 SEZ6Q53EL9 994 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 RTP2Q5QGT7 225 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 ATAT1Q5SQI0 421 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 FAM171A1Q5VUB5 890 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 ARL6IP4Q66PJ3 421 aaKnown RBP9.38□□□□□ -0.91
LRCH3-219ENST00000494069 CD300LGQ6UXG3 332 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 TMEM92Q6UXU6 159 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 TRIM67Q6ZTA4 783 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 USP49Q70CQ1 688 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 GPR149Q86SP6 731 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 CEP57Q86XR8 500 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 SYT2Q8N9I0 419 aaPredicted RBP9.38□□□□□ -0.91
LRCH3-219ENST00000494069 DRC1Q96MC2 740 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 RIPOR3Q96MK2 946 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 ZMAT2Q96NC0 199 aaKnown RBP9.38□□□□□ -0.91
LRCH3-219ENST00000494069 NECTIN4Q96NY8 510 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 PPP1R10Q96QC0 940 aaKnown RBP9.38□□□□□ -0.91
LRCH3-219ENST00000494069 TMEM134Q9H6X4 195 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 SFXN1Q9H9B4 322 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 GOLGA2P5Q9HBQ8 144 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 CLIC4Q9Y696 253 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 PLXNA3P51805 1871 aa9.38□□□□□ -0.91
LRCH3-219ENST00000494069 ZMYM2Q9UBW7 1377 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 SMIM28A0A1B0GU29 152 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 CCDC195A0A1B0GUA6 201 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 I3L4J1 428 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 TGM5O43548 720 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 GLUD1P00367 558 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 ADH1AP07327 375 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 PLS3P13797 630 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 PROZP22891 400 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 GRM5P41594 1212 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 CLCNKBP51801 687 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 RESTQ13127 1097 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 DHX8Q14562 1220 aaKnown RBP9.37□□□□□ -0.91
LRCH3-219ENST00000494069 MCM6Q14566 821 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 KARSQ15046 597 aaKnown RBP9.37□□□□□ -0.91
LRCH3-219ENST00000494069 USP41Q3LFD5 358 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 ZNF568Q3ZCX4 644 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 SPECC1Q5M775 1068 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 LILRA6Q6PI73 481 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 ALKAL1Q6UXT8 129 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 KREMEN2Q8NCW0 462 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 TMEM161BQ8NDZ6 487 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 LNX1Q8TBB1 728 aaPredicted RBP9.37□□□□□ -0.91
LRCH3-219ENST00000494069 ASIC4Q96FT7 647 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 CLSTN3Q9BQT9 956 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 NTPCRQ9BSD7 190 aaKnown RBP9.37□□□□□ -0.91
LRCH3-219ENST00000494069 MRPL4Q9BYD3 311 aaKnown RBP9.37□□□□□ -0.91
LRCH3-219ENST00000494069 HAPLN2Q9GZV7 340 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 BLOC1S4Q9NUP1 217 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 STK39Q9UEW8 545 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 LIMD1Q9UGP4 676 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 SSX2IPQ9Y2D8 614 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 HCN4Q9Y3Q4 1203 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 WDFY4Q6ZS81 3184 aa9.37□□□□□ -0.91
LRCH3-219ENST00000494069 MYO10Q9HD67 2058 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 SF3B1O75533 1304 aaKnown RBP eCLIP9.36□□□□□ -0.911e-7■■■■■ 172.3
LRCH3-219ENST00000494069 N4BP1O75113 896 aaKnown RBP9.36□□□□□ -0.91
LRCH3-219ENST00000494069 B3GAT3O94766 335 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 BRD1O95696 1058 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 PDGFBP01127 241 aaPredicted RBP9.36□□□□□ -0.91
LRCH3-219ENST00000494069 MAPTP10636 758 aaKnown RBP9.36□□□□□ -0.91
LRCH3-219ENST00000494069 PLCG1P19174 1290 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 SYT1P21579 422 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 MARCKSP29966 332 aaPredicted RBP9.36□□□□□ -0.91
LRCH3-219ENST00000494069 PLA2G5P39877 138 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 UBA7P41226 1012 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 BRCC3P46736 316 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 CEBPZQ03701 1054 aaKnown RBP9.36□□□□□ -0.91
LRCH3-219ENST00000494069 PTPAQ15257 358 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 XKR4Q5GH76 650 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 RSPO2Q6UXX9 243 aaPredicted RBP9.36□□□□□ -0.91
LRCH3-219ENST00000494069 GPBP1Q86WP2 473 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 TDRD5Q8NAT2 981 aaKnown RBP9.36□□□□□ -0.91
LRCH3-219ENST00000494069 C3orf58Q8NDZ4 430 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 ST13P5Q8NFI4 369 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms