RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 TUBD1Q9UJT1 453 aa5.03□□□□□ -1.6
CD46-217ENST00000493796 FZD1Q9UP38 647 aa5.03□□□□□ -1.6
CD46-217ENST00000493796 CHST2Q9Y4C5 530 aa5.03□□□□□ -1.6
CD46-217ENST00000493796 PNPLA7Q6ZV29 1317 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 SHTN1A0MZ66 631 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 DIRC3C9JPN6 131 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 PCDHGA12O60330 932 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 NDUFS2O75306 463 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 ZSCAN20P17040 1043 aaPredicted RBP5.02□□□□□ -1.61
CD46-217ENST00000493796 C5AR1P21730 350 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 ZFP36P26651 326 aaKnown RBP5.02□□□□□ -1.61
CD46-217ENST00000493796 RNASE9P60153 205 aaKnown RBP5.02□□□□□ -1.61
CD46-217ENST00000493796 KRT85P78386 507 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 FAM189BP81408 668 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 FHL2Q14192 279 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 ACAP2Q15057 778 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 RRP12Q5JTH9 1297 aaKnown RBP5.02□□□□□ -1.61
CD46-217ENST00000493796 ATXN7L2Q5T6C5 722 aaPredicted RBP5.02□□□□□ -1.61
CD46-217ENST00000493796 METRNLQ641Q3 311 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 GDF7Q7Z4P5 450 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 MRGPREQ86SM8 312 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 ZCRB1Q8TBF4 217 aaKnown RBP5.02□□□□□ -1.61
CD46-217ENST00000493796 CASKIN2Q8WXE0 1202 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 STON2Q8WXE9 905 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 LARP4BQ92615 738 aaKnown RBP5.02□□□□□ -1.61
CD46-217ENST00000493796 DPF2Q92785 391 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 CYFIP2Q96F07 1278 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 FUBP3Q96I24 572 aaKnown RBP eCLIP5.02□□□□□ -1.61
CD46-217ENST00000493796 MRI1Q9BV20 369 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 TRPM5Q9NZQ8 1165 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 AJAP1Q9UKB5 411 aaPredicted RBP5.02□□□□□ -1.61
CD46-217ENST00000493796 PCDHGA9Q9Y5G4 932 aaKnown RBP5.02□□□□□ -1.61
CD46-217ENST00000493796 PCDHGA8Q9Y5G5 932 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 PCDHGA7Q9Y5G6 932 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 PCDHGA6Q9Y5G7 932 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 PCDHGA3Q9Y5H0 932 aa5.02□□□□□ -1.61
CD46-217ENST00000493796 ATAD2BQ9ULI0 1458 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 WASHC2CQ9Y4E1 1318 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 KLHL33A6NCF5 533 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 DRGXA6NNA5 263 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 PPFIA4O75335 1185 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 ITGB1P05556 798 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 RAP2AP10114 183 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 FPR1P21462 350 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 ALDH1A3P47895 512 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 PCBP2Q15366 365 aaKnown RBP eCLIP5.01□□□□□ -1.61
CD46-217ENST00000493796 PTPROQ16827 1216 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 FAM102AQ5T9C2 384 aaPredicted RBP5.01□□□□□ -1.61
CD46-217ENST00000493796 OTUD7BQ6GQQ9 843 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 DRC7Q8IY82 874 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 SYNE4Q8N205 404 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 NEU4Q8WWR8 484 aaPredicted RBP5.01□□□□□ -1.61
CD46-217ENST00000493796 C7orf25Q9BPX7 421 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 BRINP2Q9C0B6 783 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 MANSC1Q9H8J5 431 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 TMEM140Q9NV12 185 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 INTUQ9ULD6 942 aa5.01□□□□□ -1.61
CD46-217ENST00000493796 RNASET2O00584 256 aaKnown RBP5□□□□□ -1.61
CD46-217ENST00000493796 ZNF185O15231 689 aa5□□□□□ -1.61
CD46-217ENST00000493796 TEX33O43247 280 aa5□□□□□ -1.61
CD46-217ENST00000493796 XPOTO43592 962 aaKnown RBP5□□□□□ -1.61
CD46-217ENST00000493796 GPR32O75388 356 aa5□□□□□ -1.61
CD46-217ENST00000493796 AMY1AP04745 511 aa5□□□□□ -1.61
CD46-217ENST00000493796 ATP5JP18859 108 aa5□□□□□ -1.61
CD46-217ENST00000493796 PCSK1P29120 753 aa5□□□□□ -1.61
CD46-217ENST00000493796 CHN2P52757 468 aa5□□□□□ -1.61
CD46-217ENST00000493796 RAP2BP61225 183 aa5□□□□□ -1.61
CD46-217ENST00000493796 MTM1Q13496 603 aa5□□□□□ -1.61
CD46-217ENST00000493796 LRRC55Q6ZSA7 311 aa5□□□□□ -1.61
CD46-217ENST00000493796 ZNF627Q7L945 461 aa5□□□□□ -1.61
CD46-217ENST00000493796 PLXDC1Q8IUK5 500 aa5□□□□□ -1.61
CD46-217ENST00000493796 CCHCR1Q8TD31 782 aa5□□□□□ -1.61
CD46-217ENST00000493796 MYEOVQ96EZ4 313 aa5□□□□□ -1.61
CD46-217ENST00000493796 TEKT5Q96M29 485 aa5□□□□□ -1.61
CD46-217ENST00000493796 NEU1Q99519 415 aa5□□□□□ -1.61
CD46-217ENST00000493796 MRIQ9BWK5 157 aa5□□□□□ -1.61
CD46-217ENST00000493796 TEX101Q9BY14 249 aa5□□□□□ -1.61
CD46-217ENST00000493796 ASPSCR1Q9BZE9 553 aa5□□□□□ -1.61
CD46-217ENST00000493796 FAM30AQ9NZY2 134 aa5□□□□□ -1.61
CD46-217ENST00000493796 SLC23A1Q9UHI7 598 aa5□□□□□ -1.61
CD46-217ENST00000493796 SAP30BPQ9UHR5 308 aaKnown RBP5□□□□□ -1.61
CD46-217ENST00000493796 ACTL7AQ9Y615 435 aa5□□□□□ -1.61
CD46-217ENST00000493796 HS3ST4Q9Y661 456 aa5□□□□□ -1.61
CD46-217ENST00000493796 TNKSO95271 1327 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 GAGE12BA1L429 117 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 GAGE12HA6NDE8 117 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 NCR1O76036 304 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 SPATA31D3P0C874 917 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 LAG3P18627 525 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 HMGA2P52926 109 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 SLC16A1P53985 500 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 ATP8B2P98198 1209 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 PTPN21Q16825 1174 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 PDCD4Q53EL6 469 aaKnown RBP4.99□□□□□ -1.61
CD46-217ENST00000493796 AGAP9Q5VTM2 703 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 Q6ZPA2 131 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 SPATA31D4Q6ZUB0 917 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 SEM1Q6ZVN7 128 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 ULK2Q8IYT8 1036 aa4.99□□□□□ -1.61
CD46-217ENST00000493796 ZGPATQ8N5A5 531 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms