RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 EPSTI1Q96J88 318 aa29.71■■■□□ 2.35
SH3GL3-204ENST00000492099 PPP1R10Q96QC0 940 aaKnown RBP29.71■■■□□ 2.35
SH3GL3-204ENST00000492099 SFXN1Q9H9B4 322 aa29.71■■■□□ 2.35
SH3GL3-204ENST00000492099 C11orf16Q9NQ32 467 aa29.71■■■□□ 2.35
SH3GL3-204ENST00000492099 CCDC39Q9UFE4 941 aa29.71■■■□□ 2.35
SH3GL3-204ENST00000492099 MORC2Q9Y6X9 1032 aaPredicted RBP29.71■■■□□ 2.35
SH3GL3-204ENST00000492099 SPDYE4A6NLX3 237 aa29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 ABLIM1O14639 778 aa29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 FAM13AO94988 1023 aa29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 C1RP00736 705 aa29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 KRT18P05783 430 aaKnown RBP29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 COL9A1P20849 921 aa29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 NCKAP1LP55160 1127 aa29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 CREMQ03060 361 aa29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 CEBPZQ03701 1054 aaKnown RBP29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 ELAVL2Q12926 359 aaKnown RBP29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 ELMSAN1Q6PJG2 1045 aa29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 ALKAL1Q6UXT8 129 aa29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 HSCBQ8IWL3 235 aa29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 ACAP3Q96P50 834 aa29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 FNIP2Q9P278 1114 aa29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 MUTYHQ9UIF7 546 aa29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 NR2E1Q9Y466 385 aa29.7■■■□□ 2.35
SH3GL3-204ENST00000492099 KIF4AO95239 1232 aa29.69■■■□□ 2.34
SH3GL3-204ENST00000492099 ZNF131P52739 623 aa29.69■■■□□ 2.34
SH3GL3-204ENST00000492099 OSTNP61366 133 aa29.69■■■□□ 2.34
SH3GL3-204ENST00000492099 XKR4Q5GH76 650 aa29.69■■■□□ 2.34
SH3GL3-204ENST00000492099 GLRA4Q5JXX5 417 aa29.69■■■□□ 2.34
SH3GL3-204ENST00000492099 SPECC1Q5M775 1068 aa29.69■■■□□ 2.34
SH3GL3-204ENST00000492099 HAUS6Q7Z4H7 955 aa29.69■■■□□ 2.34
SH3GL3-204ENST00000492099 MYCT1Q8N699 235 aa29.69■■■□□ 2.34
SH3GL3-204ENST00000492099 RIN2Q8WYP3 895 aaPredicted RBP29.69■■■□□ 2.34
SH3GL3-204ENST00000492099 UROC1Q96N76 676 aa29.69■■■□□ 2.34
SH3GL3-204ENST00000492099 PARVGQ9HBI0 331 aa29.69■■■□□ 2.34
SH3GL3-204ENST00000492099 SMIM28A0A1B0GU29 152 aa29.68■■■□□ 2.34
SH3GL3-204ENST00000492099 FAM86C2PA6NEL3 165 aa29.68■■■□□ 2.34
SH3GL3-204ENST00000492099 GLUD1P00367 558 aa29.68■■■□□ 2.34
SH3GL3-204ENST00000492099 PDIA4P13667 645 aaKnown RBP29.68■■■□□ 2.34
SH3GL3-204ENST00000492099 TXLNAP40222 546 aa29.68■■■□□ 2.34
SH3GL3-204ENST00000492099 NOLC1Q14978 699 aaKnown RBP eCLIP29.68■■■□□ 2.34
SH3GL3-204ENST00000492099 SLC39A14Q15043 492 aa29.68■■■□□ 2.34
SH3GL3-204ENST00000492099 HASPINQ8TF76 798 aa29.68■■■□□ 2.34
SH3GL3-204ENST00000492099 ZBTB45Q96K62 511 aaPredicted RBP29.68■■■□□ 2.34
SH3GL3-204ENST00000492099 B3GALT6Q96L58 329 aa29.68■■■□□ 2.34
SH3GL3-204ENST00000492099 USP28Q96RU2 1077 aa29.68■■■□□ 2.34
SH3GL3-204ENST00000492099 POMKQ9H5K3 350 aa29.68■■■□□ 2.34
SH3GL3-204ENST00000492099 SLC38A7Q9NVC3 462 aa29.68■■■□□ 2.34
SH3GL3-204ENST00000492099 CDH22Q9UJ99 828 aa29.68■■■□□ 2.34
SH3GL3-204ENST00000492099 MYH11P35749 1972 aa29.67■■■□□ 2.34
SH3GL3-204ENST00000492099 TMEM189-UBE2V1I3L0A0 370 aa29.67■■■□□ 2.34
SH3GL3-204ENST00000492099 CLDN3O15551 220 aa29.67■■■□□ 2.34
SH3GL3-204ENST00000492099 DCLRE1AQ6PJP8 1040 aa29.67■■■□□ 2.34
SH3GL3-204ENST00000492099 TMC5Q6UXY8 1006 aa29.67■■■□□ 2.34
SH3GL3-204ENST00000492099 USP49Q70CQ1 688 aa29.67■■■□□ 2.34
SH3GL3-204ENST00000492099 TTPALQ9BTX7 342 aa29.67■■■□□ 2.34
SH3GL3-204ENST00000492099 ANKFY1Q9P2R3 1169 aa29.67■■■□□ 2.34
SH3GL3-204ENST00000492099 STK17AQ9UEE5 414 aa29.67■■■□□ 2.34
SH3GL3-204ENST00000492099 PRR33A8MZF0 331 aa29.66■■■□□ 2.34
SH3GL3-204ENST00000492099 TBCAO75347 108 aaKnown RBP29.66■■■□□ 2.34
SH3GL3-204ENST00000492099 HARSP12081 509 aaKnown RBP29.66■■■□□ 2.34
SH3GL3-204ENST00000492099 ABCD1P33897 745 aa29.66■■■□□ 2.34
SH3GL3-204ENST00000492099 MCL1Q07820 350 aa29.66■■■□□ 2.34
SH3GL3-204ENST00000492099 FAM171A1Q5VUB5 890 aa29.66■■■□□ 2.34
SH3GL3-204ENST00000492099 KANK3Q6NY19 840 aa29.66■■■□□ 2.34
SH3GL3-204ENST00000492099 GPR149Q86SP6 731 aa29.66■■■□□ 2.34
SH3GL3-204ENST00000492099 HDAC7Q8WUI4 952 aa29.66■■■□□ 2.34
SH3GL3-204ENST00000492099 BICD1Q96G01 975 aa29.66■■■□□ 2.34
SH3GL3-204ENST00000492099 SNX27Q96L92 541 aa29.66■■■□□ 2.34
SH3GL3-204ENST00000492099 CLIC6Q96NY7 704 aa29.66■■■□□ 2.34
SH3GL3-204ENST00000492099 MAN1C1Q9NR34 630 aa29.66■■■□□ 2.34
SH3GL3-204ENST00000492099 TRAK2O60296 914 aa29.65■■■□□ 2.34
SH3GL3-204ENST00000492099 B3GAT3O94766 335 aa29.65■■■□□ 2.34
SH3GL3-204ENST00000492099 HSP90AA1P07900 732 aaKnown RBP29.65■■■□□ 2.34
SH3GL3-204ENST00000492099 WEE2P0C1S8 567 aa29.65■■■□□ 2.34
SH3GL3-204ENST00000492099 KCNE1P15382 129 aa29.65■■■□□ 2.34
SH3GL3-204ENST00000492099 RTP2Q5QGT7 225 aa29.65■■■□□ 2.34
SH3GL3-204ENST00000492099 RRAGBQ5VZM2 374 aa29.65■■■□□ 2.34
SH3GL3-204ENST00000492099 PDXDC1Q6P996 788 aa29.65■■■□□ 2.34
SH3GL3-204ENST00000492099 C15orf39Q6ZRI6 1047 aa29.65■■■□□ 2.34
SH3GL3-204ENST00000492099 CEP57Q86XR8 500 aa29.65■■■□□ 2.34
SH3GL3-204ENST00000492099 KRI1Q8N9T8 703 aaKnown RBP29.65■■■□□ 2.34
SH3GL3-204ENST00000492099 DDX27Q96GQ7 796 aaKnown RBP29.65■■■□□ 2.34
SH3GL3-204ENST00000492099 ZHX3Q9H4I2 956 aa29.65■■■□□ 2.34
SH3GL3-204ENST00000492099 TSHZ2Q9NRE2 1034 aa29.65■■■□□ 2.34
SH3GL3-204ENST00000492099 CNTN3Q9P232 1028 aa29.65■■■□□ 2.34
SH3GL3-204ENST00000492099 TBX20Q9UMR3 447 aa29.65■■■□□ 2.34
SH3GL3-204ENST00000492099 K7ENM7 598 aa29.64■■■□□ 2.34
SH3GL3-204ENST00000492099 MATR3P43243 847 aaKnown RBP eCLIP29.64■■■□□ 2.342e-6■■■■□ 24.7
SH3GL3-204ENST00000492099 NASPP49321 788 aaPredicted RBP29.64■■■□□ 2.34
SH3GL3-204ENST00000492099 CLCNKBP51801 687 aa29.64■■■□□ 2.34
SH3GL3-204ENST00000492099 UPP1Q16831 310 aa29.64■■■□□ 2.34
SH3GL3-204ENST00000492099 CMASQ8NFW8 434 aaPredicted RBP29.64■■■□□ 2.34
SH3GL3-204ENST00000492099 PIK3R5Q8WYR1 880 aa29.64■■■□□ 2.34
SH3GL3-204ENST00000492099 PLEKHA4Q9H4M7 779 aa29.64■■■□□ 2.34
SH3GL3-204ENST00000492099 TRAPPC3O43617 180 aa29.63■■■□□ 2.33
SH3GL3-204ENST00000492099 LIG4P49917 911 aa29.63■■■□□ 2.33
SH3GL3-204ENST00000492099 CYP26C1Q6V0L0 522 aa29.63■■■□□ 2.33
SH3GL3-204ENST00000492099 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.63■■■□□ 2.33
SH3GL3-204ENST00000492099 PALB2Q86YC2 1186 aa29.63■■■□□ 2.33
SH3GL3-204ENST00000492099 EDAQ92838 391 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms