RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 CDR2LQ86X02 465 aaPredicted RBP10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 PKMYT1Q99640 499 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 GPR62Q9BZJ7 368 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 UBE2ZQ9H832 354 aaPredicted RBP10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 CD320Q9NPF0 282 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 SPG21Q9NZD8 308 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 KCNG1Q9UIX4 513 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 DERAQ9Y315 318 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 ITGA4P13612 1032 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 SCNN1GP51170 649 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 SMAD2Q15796 467 aaKnown RBP10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 LONRF3Q496Y0 759 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 PAN2Q504Q3 1202 aaKnown RBP10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 MAEAQ7L5Y9 396 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 SFR1Q86XK3 245 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 SCFD1Q8WVM8 642 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 PAGE5Q96GU1 130 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 ZBED2Q9BTP6 218 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 GINS2Q9Y248 185 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 PVALEFA0A1B0GWK0 134 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 INO80B-WBP1J3KQ70 363 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 PIRO00625 290 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 UBA7P41226 1012 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 TUSC3Q13454 348 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 SLC17A8Q8NDX2 589 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 LNX1Q8TBB1 728 aaPredicted RBP10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 CALML4Q96GE6 196 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 ZNF558Q96NG5 402 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 K7ERI5 159 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 NCK2O43639 380 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 KIF4AO95239 1232 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 MYBP10242 640 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 PFKFB1P16118 471 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 GAP43P17677 238 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 TFF2Q03403 129 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 CCDC73Q6ZRK6 1079 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 ZBTB8OSQ8IWT0 167 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 ERLIN2O94905 339 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 NDUFA8P51970 172 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 CMASQ8NFW8 434 aaPredicted RBP10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 NGRNQ9NPE2 291 aaKnown RBP10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 CFAP45Q9UL16 551 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 BRWD1Q9NSI6 2320 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 PTPRJQ12913 1337 aa10.07□□□□□ -0.8
SUPT20H-220ENST00000490716 MARCH6O60337 910 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 MYL1P05976 194 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 KCNQ1P51787 676 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 RBM10P98175 930 aaKnown RBP10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 CUL4BQ13620 913 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 C1orf220Q5T0J3 134 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 UNC13DQ70J99 1090 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 HDAC7Q8WUI4 952 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 IFT74Q96LB3 600 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 CACNG4Q9UBN1 327 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 USP25Q9UHP3 1055 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 MBTPS2O43462 519 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 ENPEPQ07075 957 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 NOLC1Q14978 699 aaKnown RBP eCLIP10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 PTPROQ16827 1216 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 RRAGBQ5VZM2 374 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 DEPTORQ8TB45 409 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 KHSRPQ92945 711 aaKnown RBP eCLIP10.06□□□□□ -0.82e-8■■■□□ 18.2
SUPT20H-220ENST00000490716 UROC1Q96N76 676 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 THEGQ9P2T0 379 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 CIZ1Q9ULV3 898 aaPredicted RBP10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 PCDHB12Q9Y5F1 795 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 GARTP22102 1010 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 GLB1LQ6UWU2 654 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 SLC9A9Q8IVB4 645 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 EFCAB13Q8IY85 973 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 PLEKHO2Q8TD55 490 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 HLA-CQ95604 372 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 KLHL5Q96PQ7 755 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 RTP3Q9BQQ7 232 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 C11orf16Q9NQ32 467 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 LRFN2Q9ULH4 789 aa10.06□□□□□ -0.8
SUPT20H-220ENST00000490716 H0YCG3 227 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 RHOBTB3O94955 611 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 CYP11A1P05108 521 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 SNRPFP62306 86 aaKnown RBP10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 RTP2Q5QGT7 225 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 SPATA1Q5VX52 437 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 ANKRD54Q6NXT1 300 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 C15orf39Q6ZRI6 1047 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 SV2BQ7L1I2 683 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 PIK3R5Q8WYR1 880 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 ZNF707Q96C28 371 aaPredicted RBP10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 CLSTN3Q9BQT9 956 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 AAASQ9NRG9 546 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 LARSQ9P2J5 1176 aaKnown RBP10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 FSD2A1L4K1 749 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 ABLIM3O94929 683 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 POMCP01189 267 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 PRR29P0C7W0 189 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 ALCAMQ13740 583 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 TJAP1Q5JTD0 557 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 KCNH3Q9ULD8 1083 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 CLCNKBP51801 687 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 MRPS5P82675 430 aaKnown RBP10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 ZP2Q05996 745 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms