RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 HOXC13P31276 330 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 CLCN3P51790 818 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 AFF1P51825 1210 aaKnown RBP8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 NLRP11P59045 1033 aaKnown RBP8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 CBLBQ13191 982 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 ITGB3BPQ13352 177 aaPredicted RBP8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 PPP2R5DQ14738 602 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 NOMO2Q5JPE7 1267 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 ELMSAN1Q6PJG2 1045 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 LONP2Q86WA8 852 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 PROSER1Q86XN7 944 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 CCDC60Q8IWA6 550 aaPredicted RBP8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 FAM227BQ96M60 508 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 PHF20Q9BVI0 1012 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 GBP3Q9H0R5 595 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 SMOC1Q9H4F8 434 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 JADE2Q9NQC1 790 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 HELLSQ9NRZ9 838 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 KCNH7Q9NS40 1196 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 DACT1Q9NYF0 836 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 ANKFY1Q9P2R3 1169 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 MRPS17Q9Y2R5 130 aaKnown RBP8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 MGAQ8IWI9 3026 aa8.09□□□□□ -1.11
PDLIM1-203ENST00000490391 MYO9AB2RTY4 2548 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 NFASCO94856 1347 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 SPTAN1Q13813 2472 aaKnown RBP8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 MYH9P35579 1960 aaKnown RBP8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 URB1O60287 2271 aaKnown RBP8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 NBPF19A0A087WUL8 3843 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 B4E1Z4 1266 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 GAS2O43903 313 aaKnown RBP8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 ZMYND10O75800 440 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 CCNE2O96020 404 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 DARSP14868 501 aaKnown RBP8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 RAP1GAPP47736 663 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 CXCL12P48061 93 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 PLCB2Q00722 1185 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 DSG1Q02413 1049 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 RNASELQ05823 741 aaKnown RBP8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 GRM4Q14833 912 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 SEC23AQ15436 765 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 LONRF3Q496Y0 759 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 TCEAL6Q6IPX3 200 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 C19orf48Q6RUI8 117 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 GLB1LQ6UWU2 654 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 ABHD15Q6UXT9 468 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 GRASPQ7Z6J2 395 aaPredicted RBP8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 PALB2Q86YC2 1186 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 LURAP1LQ8IV03 231 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 SMARCC2Q8TAQ2 1214 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 ITFG1Q8TB96 612 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 DNASE1L2Q92874 299 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 TCEAL3Q969E4 200 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 LOXL4Q96JB6 756 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 MBOAT7Q96N66 472 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 PLA2G2FQ9BZM2 168 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 CHST7Q9NS84 486 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 C2orf42Q9NWW7 574 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 ZSWIM5Q9P217 1185 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 DDX19BQ9UMR2 479 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 NDRG2Q9UN36 371 aaKnown RBP8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 INPP5FQ9Y2H2 1132 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 NEUROG3Q9Y4Z2 214 aa8.08□□□□□ -1.12
PDLIM1-203ENST00000490391 NRP1O14786 923 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 ZNF623O75123 536 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 ECI2O75521 394 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 CSDE1O75534 798 aaKnown RBP8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 CHRNB1P11230 501 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 CTSOP43234 321 aaPredicted RBP8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 GLUD2P49448 558 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 SH3PXD2AQ5TCZ1 1133 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 RNF43Q68DV7 783 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 SPEM1Q8N4L4 309 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 METTL13Q8N6R0 699 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 ZNF668Q96K58 619 aaPredicted RBP8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 TMEM175Q9BSA9 504 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 DCTPP1Q9H773 170 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 LMAN1LQ9HAT1 526 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 IGSF5Q9NSI5 407 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 PGPEP1Q9NXJ5 209 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 SSX2IPQ9Y2D8 614 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 MSRB2Q9Y3D2 182 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 EML5Q05BV3 1969 aa8.07□□□□□ -1.12
PDLIM1-203ENST00000490391 SALL3Q9BXA9 1300 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 ANKRD17O75179 2603 aaKnown RBP8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 F8W810 466 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 MAN2B1O00754 1011 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 HYAL3O43820 417 aaPredicted RBP8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 CEACAM1P13688 526 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 HOXA6P31267 233 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 GPC3P51654 580 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 COL28A1Q2UY09 1125 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 MCMDC2Q4G0Z9 681 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 WDR44Q5JSH3 913 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 IFIT1BQ5T764 474 aaKnown RBP8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 HEATR6Q6AI08 1181 aaKnown RBP8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 AGMOQ6ZNB7 445 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 CEP68Q76N32 757 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 WDR5BQ86VZ2 330 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 CUL5Q93034 780 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms