RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 Q6YL49 198 aa5.29□□□□□ -1.56
HMGN1-218ENST00000490032 ZG16BQ96DA0 208 aa5.29□□□□□ -1.56
HMGN1-218ENST00000490032 ADAM2Q99965 735 aa5.29□□□□□ -1.56
HMGN1-218ENST00000490032 FAM30AQ9NZY2 134 aa5.29□□□□□ -1.56
HMGN1-218ENST00000490032 LMNAP02545 664 aaKnown RBP5.28□□□□□ -1.56
HMGN1-218ENST00000490032 IL2RBP14784 551 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 CHN2P52757 468 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 MGAT2Q10469 447 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 RRP12Q5JTH9 1297 aaKnown RBP5.28□□□□□ -1.56
HMGN1-218ENST00000490032 HECTD2Q5U5R9 776 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 EGFLAMQ63HQ2 1017 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 DNAJC10Q8IXB1 793 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 RHOT2Q8IXI1 618 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 DRC7Q8IY82 874 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 PQLC1Q8N2U9 271 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 BEND2Q8NDZ0 799 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 CPEB3Q8NE35 698 aaKnown RBP5.28□□□□□ -1.56
HMGN1-218ENST00000490032 GPR150Q8NGU9 434 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 WDR11Q9BZH6 1224 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 DMRT3Q9NQL9 472 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 LANCL2Q9NS86 450 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 DNAJC28Q9NX36 388 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 SYBUQ9NX95 663 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 MOCS1Q9NZB8 636 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 ANKFY1Q9P2R3 1169 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 USP15Q9Y4E8 981 aaPredicted RBP5.28□□□□□ -1.56
HMGN1-218ENST00000490032 FPGT-TNNI3KV9GXZ4 949 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 PHLDB1Q86UU1 1377 aa5.28□□□□□ -1.56
HMGN1-218ENST00000490032 ENDOD1O94919 500 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 CFIP05156 583 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 HLA-DOAP06340 250 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 TGM1P22735 817 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 DDX6P26196 483 aaKnown RBP eCLIP5.27□□□□□ -1.571e-5■■■□□ 17.8
HMGN1-218ENST00000490032 CNGA1P29973 690 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 SEPT2Q15019 361 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 AFMIDQ63HM1 303 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 OTUD7BQ6GQQ9 843 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 ARMC6Q6NXE6 501 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 ZNF575Q86XF7 245 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 COG1Q8WTW3 980 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 CASKIN2Q8WXE0 1202 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 COQ10AQ96MF6 247 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 UHRF1Q96T88 793 aaPredicted RBP5.27□□□□□ -1.57
HMGN1-218ENST00000490032 MRI1Q9BV20 369 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 ADI1Q9BV57 179 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 FAM126AQ9BYI3 521 aaPredicted RBP5.27□□□□□ -1.57
HMGN1-218ENST00000490032 CYP4F11Q9HBI6 524 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 ZNF277Q9NRM2 450 aaPredicted RBP5.27□□□□□ -1.57
HMGN1-218ENST00000490032 SIK3Q9Y2K2 1263 aa5.27□□□□□ -1.57
HMGN1-218ENST00000490032 PIPSLA2A3N6 862 aa5.26□□□□□ -1.57
HMGN1-218ENST00000490032 SLC6A9P48067 706 aa5.26□□□□□ -1.57
HMGN1-218ENST00000490032 GUCY1B3Q02153 619 aa5.26□□□□□ -1.57
HMGN1-218ENST00000490032 FBXO18Q8NFZ0 1043 aa5.26□□□□□ -1.57
HMGN1-218ENST00000490032 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.26□□□□□ -1.57
HMGN1-218ENST00000490032 LINC00476Q8WZB0 136 aa5.26□□□□□ -1.57
HMGN1-218ENST00000490032 KLHL11Q9NVR0 708 aa5.26□□□□□ -1.57
HMGN1-218ENST00000490032 ZBTB21Q9ULJ3 1066 aa5.26□□□□□ -1.57
HMGN1-218ENST00000490032 ATP11BQ9Y2G3 1177 aa5.26□□□□□ -1.57
HMGN1-218ENST00000490032 TRIM75PA6NK02 468 aa5.25□□□□□ -1.57
HMGN1-218ENST00000490032 ELANEP08246 267 aa5.25□□□□□ -1.57
HMGN1-218ENST00000490032 EGR2P11161 476 aaPredicted RBP5.25□□□□□ -1.57
HMGN1-218ENST00000490032 OSMP13725 252 aa5.25□□□□□ -1.57
HMGN1-218ENST00000490032 GSPT1P15170 499 aaKnown RBP5.25□□□□□ -1.57
HMGN1-218ENST00000490032 AGXTP21549 392 aa5.25□□□□□ -1.57
HMGN1-218ENST00000490032 BMP5P22003 454 aa5.25□□□□□ -1.57
HMGN1-218ENST00000490032 USP14P54578 494 aa5.25□□□□□ -1.57
HMGN1-218ENST00000490032 PER3P56645 1201 aa5.25□□□□□ -1.57
HMGN1-218ENST00000490032 RAP2BP61225 183 aa5.25□□□□□ -1.57
HMGN1-218ENST00000490032 BLOC1S1P78537 153 aa5.25□□□□□ -1.57
HMGN1-218ENST00000490032 NOMO1Q15155 1222 aa5.25□□□□□ -1.57
HMGN1-218ENST00000490032 SEM1Q6ZVN7 128 aa5.25□□□□□ -1.57
HMGN1-218ENST00000490032 OR56A1Q8NGH5 318 aa5.25□□□□□ -1.57
HMGN1-218ENST00000490032 FUBP1Q96AE4 644 aaKnown RBP5.25□□□□□ -1.57
HMGN1-218ENST00000490032 CYFIP2Q96F07 1278 aa5.25□□□□□ -1.57
HMGN1-218ENST00000490032 FUBP3Q96I24 572 aaKnown RBP eCLIP5.25□□□□□ -1.57
HMGN1-218ENST00000490032 SENP6Q9GZR1 1112 aaPredicted RBP5.25□□□□□ -1.57
HMGN1-218ENST00000490032 PCDHGA2Q9Y5H1 932 aa5.25□□□□□ -1.57
HMGN1-218ENST00000490032 GPR45Q9Y5Y3 372 aa5.25□□□□□ -1.57
HMGN1-218ENST00000490032 EPN1Q9Y6I3 576 aaPredicted RBP5.25□□□□□ -1.57
HMGN1-218ENST00000490032 WASHC2AQ641Q2 1341 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 PCSK5Q92824 1860 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 UNC119BA6NIH7 251 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 FAM171A2A8MVW0 826 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 TEX33O43247 280 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 PPFIA2O75334 1257 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 SPDEFO95238 335 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 POMCP01189 267 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 RAP2AP10114 183 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 ATP5JP18859 108 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 FPR1P21462 350 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 GCSHP23434 173 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 ALDH1A3P47895 512 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 AVPR1BP47901 424 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 RESTQ13127 1097 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 KLF1Q13351 362 aaPredicted RBP5.24□□□□□ -1.57
HMGN1-218ENST00000490032 TP53BP2Q13625 1128 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 UBXN2BQ14CS0 331 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 ABHD17BQ5VST6 288 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 MED25Q71SY5 747 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 MAPKAPK5Q8IW41 473 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms