RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 LACTB2Q53H82 288 aaPredicted RBP10.52□□□□□ -0.72
NOD1-208ENST00000489614 ANO5Q75V66 913 aa10.52□□□□□ -0.72
NOD1-208ENST00000489614 MIER3Q7Z3K6 550 aa10.52□□□□□ -0.72
NOD1-208ENST00000489614 ANKRD13CQ8N6S4 541 aa10.52□□□□□ -0.72
NOD1-208ENST00000489614 TIPINQ9BVW5 301 aa10.52□□□□□ -0.72
NOD1-208ENST00000489614 GJD2Q9UKL4 321 aa10.52□□□□□ -0.72
NOD1-208ENST00000489614 DNM3Q9UQ16 869 aa10.52□□□□□ -0.72
NOD1-208ENST00000489614 EMSYQ7Z589 1322 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 A0A1B0GTH6 734 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 SNAI1O95863 264 aaPredicted RBP10.52□□□□□ -0.73
NOD1-208ENST00000489614 PGK2P07205 417 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 MAPK4P31152 587 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 MARSP56192 900 aaKnown RBP10.52□□□□□ -0.73
NOD1-208ENST00000489614 STX17P56962 302 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 PSMC5P62195 406 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 DYNC1I2Q13409 638 aaKnown RBP10.52□□□□□ -0.73
NOD1-208ENST00000489614 KCTD19Q17RG1 926 aaPredicted RBP10.52□□□□□ -0.73
NOD1-208ENST00000489614 TMEM132AQ24JP5 1023 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 CCDC122Q5T0U0 273 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 LRRC55Q6ZSA7 311 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 GPBP1Q86WP2 473 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 LMNTD2Q8IXW0 634 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 ZNF507Q8TCN5 953 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 SNRNP27Q8WVK2 155 aaKnown RBP10.52□□□□□ -0.73
NOD1-208ENST00000489614 ATP6V1G3Q96LB4 118 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.52□□□□□ -0.73
NOD1-208ENST00000489614 NIFKQ9BYG3 293 aaKnown RBP10.52□□□□□ -0.73
NOD1-208ENST00000489614 JPH1Q9HDC5 661 aaPredicted RBP10.52□□□□□ -0.73
NOD1-208ENST00000489614 TBC1D7Q9P0N9 293 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 SLC9A2Q9UBY0 812 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 NFU1Q9UMS0 254 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 CCT8L1PA6NM43 557 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 TLR2O60603 784 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 CCNE1P24864 410 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 ADORA2AP29274 412 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 CXCR5P32302 372 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 EPHB4P54760 987 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 ACTR2P61160 394 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 CCNA1P78396 465 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 CKAP4Q07065 602 aaKnown RBP10.52□□□□□ -0.73
NOD1-208ENST00000489614 PAK1Q13153 545 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 CEP128Q6ZU80 1094 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 CCDC60Q8IWA6 550 aaPredicted RBP10.52□□□□□ -0.73
NOD1-208ENST00000489614 CCDC155Q8N6L0 562 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 OR2W6PQ8NHA6 318 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 SCFD1Q8WVM8 642 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 HPS3Q969F9 1004 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 MAML3Q96JK9 1138 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 FAM81BQ96LP2 452 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 CHP1Q99653 195 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 EHD2Q9NZN4 543 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 ZMYND8Q9ULU4 1186 aaPredicted RBP10.52□□□□□ -0.73
NOD1-208ENST00000489614 ASB3Q9Y575 518 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 PCDHA10Q9Y5I2 948 aa10.52□□□□□ -0.73
NOD1-208ENST00000489614 ZSCAN5CA6NGD5 496 aaPredicted RBP10.51□□□□□ -0.73
NOD1-208ENST00000489614 TMEM88BA6NKF7 163 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 SMAPO00193 183 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 TRAPPC3O43617 180 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 CCND1P24385 295 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 ZNF157P51786 506 aaPredicted RBP10.51□□□□□ -0.73
NOD1-208ENST00000489614 USP46P62068 366 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 NKX3-2P78367 333 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 CYP4A11Q02928 519 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 PDE4DQ08499 809 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 GRM1Q13255 1194 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 NR1I3Q14994 352 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 P3H1Q32P28 736 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 CELF3Q5SZQ8 465 aaKnown RBP10.51□□□□□ -0.73
NOD1-208ENST00000489614 NELFBQ8WX92 580 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 KIFAP3Q92845 792 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 ABTB1Q969K4 478 aaPredicted RBP10.51□□□□□ -0.73
NOD1-208ENST00000489614 CDK5RAP3Q96JB5 506 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 THAP9Q9H5L6 903 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 VTA1Q9NP79 307 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 AGAP1Q9UPQ3 857 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 CTNND2Q9UQB3 1225 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 SCN10AQ9Y5Y9 1956 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 ZBTB42B2RXF5 422 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 EIF3DO15371 548 aaKnown RBP eCLIP10.51□□□□□ -0.73
NOD1-208ENST00000489614 MFAP3LO75121 409 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 TOMM70O94826 608 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 NPTXRO95502 500 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 CASP5P51878 434 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 ASIC1P78348 528 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 NPLOC4Q8TAT6 608 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 WHAMMQ8TF30 809 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 RAPGEF5Q92565 580 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 P2RX5Q93086 422 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 DTNBP1Q96EV8 351 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 ZIC5Q96T25 663 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 GPR20Q99678 358 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 NACA2Q9H009 215 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 BHMT2Q9H2M3 363 aa10.51□□□□□ -0.73
NOD1-208ENST00000489614 MACROD2A1Z1Q3 448 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 ASB14A6NK59 587 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 RSPH10B2B2RC85 870 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 RNF225M0QZC1 329 aaPredicted RBP10.5□□□□□ -0.73
NOD1-208ENST00000489614 HNRNPRO43390 633 aaKnown RBP10.5□□□□□ -0.73
NOD1-208ENST00000489614 RSPH10BP0C881 870 aa10.5□□□□□ -0.73
NOD1-208ENST00000489614 IDEP14735 1019 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms