RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 TNFRSF25Q93038 417 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 NAP1L4Q99733 375 aaKnown RBP12.6□□□□□ -0.39
SNU13-208ENST00000488571 RPP25Q9BUL9 199 aaKnown RBP12.6□□□□□ -0.39
SNU13-208ENST00000488571 TRIM6Q9C030 488 aaPredicted RBP12.6□□□□□ -0.39
SNU13-208ENST00000488571 SEMA4AQ9H3S1 761 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 ANKEF1Q9NU02 776 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 PDRG1Q9NUG6 133 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 KLK14Q9P0G3 267 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 FBXW11Q9UKB1 542 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 NUMBLQ9Y6R0 609 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 FRYLO94915 3013 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 VWA8A3KMH1 1905 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 A0A087WWV3 80 aa12.59□□□□□ -0.39
SNU13-208ENST00000488571 WNT7AO00755 349 aa12.59□□□□□ -0.39
SNU13-208ENST00000488571 CDKL5O76039 1030 aa12.59□□□□□ -0.39
SNU13-208ENST00000488571 RARRES1P49788 294 aa12.59□□□□□ -0.39
SNU13-208ENST00000488571 CREMQ03060 361 aa12.59□□□□□ -0.39
SNU13-208ENST00000488571 HSP90AA2PQ14568 343 aaPredicted RBP12.59□□□□□ -0.39
SNU13-208ENST00000488571 NAB2Q15742 525 aa12.59□□□□□ -0.39
SNU13-208ENST00000488571 DCLRE1AQ6PJP8 1040 aa12.59□□□□□ -0.39
SNU13-208ENST00000488571 HACE1Q8IYU2 909 aa12.59□□□□□ -0.39
SNU13-208ENST00000488571 PIGOQ8TEQ8 1089 aa12.59□□□□□ -0.39
SNU13-208ENST00000488571 RMDN1Q96DB5 314 aa12.59□□□□□ -0.39
SNU13-208ENST00000488571 CLSTN3Q9BQT9 956 aa12.59□□□□□ -0.39
SNU13-208ENST00000488571 FOXQ1Q9C009 403 aa12.59□□□□□ -0.39
SNU13-208ENST00000488571 POLR3FQ9H1D9 316 aaPredicted RBP12.59□□□□□ -0.39
SNU13-208ENST00000488571 CXCL16Q9H2A7 254 aa12.59□□□□□ -0.39
SNU13-208ENST00000488571 TPCN1Q9ULQ1 816 aa12.59□□□□□ -0.39
SNU13-208ENST00000488571 SIT1Q9Y3P8 196 aa12.59□□□□□ -0.39
SNU13-208ENST00000488571 MIA3Q5JRA6 1907 aa12.58□□□□□ -0.39
SNU13-208ENST00000488571 CACNA1IQ9P0X4 2223 aa12.58□□□□□ -0.39
SNU13-208ENST00000488571 PATJQ8NI35 1801 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 PTGESO14684 152 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 PFKFB2O60825 505 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 LRRN2O75325 713 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 TADA2AO75478 443 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 KIF4AO95239 1232 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 BAG4O95429 457 aaKnown RBP12.58□□□□□ -0.4
SNU13-208ENST00000488571 SP9P0CG40 484 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 FDPSP14324 419 aaKnown RBP12.58□□□□□ -0.4
SNU13-208ENST00000488571 XBP1P17861 261 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 RFX1P22670 979 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 FSHRP23945 695 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 STARD6P59095 220 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 NTHL1P78549 312 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 TUSC3Q13454 348 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 OTOGLQ3ZCN5 2332 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 PARM1Q6UWI2 310 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 GRASPQ7Z6J2 395 aaPredicted RBP12.58□□□□□ -0.4
SNU13-208ENST00000488571 C1orf210Q8IVY1 113 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 MAML2Q8IZL2 1156 aaPredicted RBP12.58□□□□□ -0.4
SNU13-208ENST00000488571 PJA1Q8NG27 643 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 LNX1Q8TBB1 728 aaPredicted RBP12.58□□□□□ -0.4
SNU13-208ENST00000488571 KCNG4Q8TDN1 519 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 HASPINQ8TF76 798 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 PIK3R5Q8WYR1 880 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 NOTCH4Q99466 2003 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 GPRC5CQ9NQ84 441 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 PARP2Q9UGN5 583 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 PCDHA12Q9UN75 941 aa12.58□□□□□ -0.4
SNU13-208ENST00000488571 ZFP37Q9Y6Q3 630 aaPredicted RBP12.58□□□□□ -0.4
SNU13-208ENST00000488571 SF3B1O75533 1304 aaKnown RBP eCLIP12.58□□□□□ -0.4
SNU13-208ENST00000488571 CASTOR2A6NHX0 329 aa12.57□□□□□ -0.4
SNU13-208ENST00000488571 ADAM12O43184 909 aa12.57□□□□□ -0.4
SNU13-208ENST00000488571 USO1O60763 962 aaKnown RBP12.57□□□□□ -0.4
SNU13-208ENST00000488571 HNRNPA1P09651 372 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNU13-208ENST00000488571 GPC5P78333 572 aa12.57□□□□□ -0.4
SNU13-208ENST00000488571 CALCRLQ16602 461 aa12.57□□□□□ -0.4
SNU13-208ENST00000488571 CDCA2Q69YH5 1023 aaPredicted RBP12.57□□□□□ -0.4
SNU13-208ENST00000488571 ZNF454Q8N9F8 522 aa12.57□□□□□ -0.4
SNU13-208ENST00000488571 TTPALQ9BTX7 342 aa12.57□□□□□ -0.4
SNU13-208ENST00000488571 DDX23Q9BUQ8 820 aaKnown RBP12.57□□□□□ -0.4
SNU13-208ENST00000488571 FZD8Q9H461 694 aa12.57□□□□□ -0.4
SNU13-208ENST00000488571 TTC12Q9H892 705 aaPredicted RBP12.57□□□□□ -0.4
SNU13-208ENST00000488571 ORC3Q9UBD5 711 aaPredicted RBP12.57□□□□□ -0.4
SNU13-208ENST00000488571 CDH7Q9ULB5 785 aa12.57□□□□□ -0.4
SNU13-208ENST00000488571 LRRIQ4A6NIV6 560 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 CCL16O15467 120 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 EDN1P05305 212 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 C8AP07357 584 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 SPATA31C1P0DKV0 1188 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 IGFBP6P24592 240 aaPredicted RBP12.56□□□□□ -0.4
SNU13-208ENST00000488571 KRT2P35908 639 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 TXKP42681 527 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 SNW1Q13573 536 aaKnown RBP12.56□□□□□ -0.4
SNU13-208ENST00000488571 PSMD5Q16401 504 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 FAM187BQ17R55 369 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 FAM171A1Q5VUB5 890 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 MAEAQ7L5Y9 396 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 CEP57Q86XR8 500 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 KIAA2013Q8IYS2 634 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 SUMF1Q8NBK3 374 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 ITFG1Q8TB96 612 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 FGF13Q92913 245 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 PRIMPOLQ96LW4 560 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 MTMR9Q96QG7 549 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 PDZD7Q9H5P4 517 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 SNTG2Q9NY99 539 aa12.56□□□□□ -0.4
SNU13-208ENST00000488571 KANSL1LA0AUZ9 987 aa12.55□□□□□ -0.4
SNU13-208ENST00000488571 MED19A0JLT2 244 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms