RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 PLCD3Q8N3E9 789 aa25.35■■□□□ 1.65
CUL4A-209ENST00000488558 RABGGTAQ92696 567 aa25.35■■□□□ 1.65
CUL4A-209ENST00000488558 CALML4Q96GE6 196 aa25.35■■□□□ 1.65
CUL4A-209ENST00000488558 B3GALT6Q96L58 329 aa25.35■■□□□ 1.65
CUL4A-209ENST00000488558 UROC1Q96N76 676 aa25.35■■□□□ 1.65
CUL4A-209ENST00000488558 CCDC94Q9BW85 323 aaPredicted RBP25.35■■□□□ 1.65
CUL4A-209ENST00000488558 TARS2Q9BW92 718 aaKnown RBP25.35■■□□□ 1.65
CUL4A-209ENST00000488558 BACH2Q9BYV9 841 aa25.35■■□□□ 1.65
CUL4A-209ENST00000488558 KCNH6Q9H252 994 aa25.35■■□□□ 1.65
CUL4A-209ENST00000488558 PLEKHA4Q9H4M7 779 aa25.35■■□□□ 1.65
CUL4A-209ENST00000488558 CACNG4Q9UBN1 327 aa25.35■■□□□ 1.65
CUL4A-209ENST00000488558 ABLIM1O14639 778 aa25.34■■□□□ 1.65
CUL4A-209ENST00000488558 SLC16A4O15374 487 aa25.34■■□□□ 1.65
CUL4A-209ENST00000488558 UBA7P41226 1012 aa25.34■■□□□ 1.65
CUL4A-209ENST00000488558 YARSP54577 528 aaKnown RBP25.34■■□□□ 1.65
CUL4A-209ENST00000488558 RTP2Q5QGT7 225 aa25.34■■□□□ 1.65
CUL4A-209ENST00000488558 MPZL3Q6UWV2 235 aa25.34■■□□□ 1.65
CUL4A-209ENST00000488558 CCDC149Q6ZUS6 474 aa25.34■■□□□ 1.65
CUL4A-209ENST00000488558 TMEM161BQ8NDZ6 487 aa25.34■■□□□ 1.65
CUL4A-209ENST00000488558 PIK3R5Q8WYR1 880 aa25.34■■□□□ 1.65
CUL4A-209ENST00000488558 FAM122AQ96E09 287 aa25.34■■□□□ 1.65
CUL4A-209ENST00000488558 ODF2LQ9ULJ1 636 aa25.34■■□□□ 1.65
CUL4A-209ENST00000488558 CITO14578 2027 aa25.34■■□□□ 1.65
CUL4A-209ENST00000488558 ZNF318Q5VUA4 2279 aa25.33■■□□□ 1.65
CUL4A-209ENST00000488558 VPS37CA5D8V6 355 aaPredicted RBP25.33■■□□□ 1.65
CUL4A-209ENST00000488558 SFI1A8K8P3 1242 aa25.33■■□□□ 1.65
CUL4A-209ENST00000488558 H0YCG3 227 aa25.33■■□□□ 1.65
CUL4A-209ENST00000488558 SCP2P22307 547 aa25.33■■□□□ 1.65
CUL4A-209ENST00000488558 STRN3Q13033 797 aa25.33■■□□□ 1.65
CUL4A-209ENST00000488558 SF3A1Q15459 793 aaKnown RBP25.33■■□□□ 1.65
CUL4A-209ENST00000488558 PDXDC1Q6P996 788 aa25.33■■□□□ 1.65
CUL4A-209ENST00000488558 CEP120Q8N960 986 aa25.33■■□□□ 1.65
CUL4A-209ENST00000488558 INTS4Q96HW7 963 aaKnown RBP25.33■■□□□ 1.65
CUL4A-209ENST00000488558 PLIN2Q99541 437 aa25.33■■□□□ 1.65
CUL4A-209ENST00000488558 TTPALQ9BTX7 342 aa25.33■■□□□ 1.65
CUL4A-209ENST00000488558 LARSQ9P2J5 1176 aaKnown RBP25.33■■□□□ 1.65
CUL4A-209ENST00000488558 SORCS3Q9UPU3 1222 aa25.33■■□□□ 1.65
CUL4A-209ENST00000488558 VWA8A3KMH1 1905 aa25.33■■□□□ 1.65
CUL4A-209ENST00000488558 PDCD11Q14690 1871 aaKnown RBP25.32■■□□□ 1.64
CUL4A-209ENST00000488558 TOM1L1O75674 476 aa25.32■■□□□ 1.64
CUL4A-209ENST00000488558 MAPTP10636 758 aaKnown RBP25.32■■□□□ 1.64
CUL4A-209ENST00000488558 RAD51AP2Q09MP3 1159 aa25.32■■□□□ 1.64
CUL4A-209ENST00000488558 GLRA4Q5JXX5 417 aa25.32■■□□□ 1.64
CUL4A-209ENST00000488558 FAM171A1Q5VUB5 890 aa25.32■■□□□ 1.64
CUL4A-209ENST00000488558 LILRA6Q6PI73 481 aa25.32■■□□□ 1.64
CUL4A-209ENST00000488558 ALKAL1Q6UXT8 129 aa25.32■■□□□ 1.64
CUL4A-209ENST00000488558 ZPBP2Q6X784 338 aa25.32■■□□□ 1.64
CUL4A-209ENST00000488558 ZBTB33Q86T24 672 aa25.32■■□□□ 1.64
CUL4A-209ENST00000488558 UBALD2Q8IYN6 164 aa25.32■■□□□ 1.64
CUL4A-209ENST00000488558 HASPINQ8TF76 798 aa25.32■■□□□ 1.64
CUL4A-209ENST00000488558 SLC38A7Q9NVC3 462 aa25.32■■□□□ 1.64
CUL4A-209ENST00000488558 ZDHHC7Q9NXF8 308 aa25.32■■□□□ 1.64
CUL4A-209ENST00000488558 SMIM28A0A1B0GU29 152 aa25.31■■□□□ 1.64
CUL4A-209ENST00000488558 TGM5O43548 720 aa25.31■■□□□ 1.64
CUL4A-209ENST00000488558 NCKAP1LP55160 1127 aa25.31■■□□□ 1.64
CUL4A-209ENST00000488558 MTMR3Q13615 1198 aa25.31■■□□□ 1.64
CUL4A-209ENST00000488558 ARSHQ5FYA8 562 aa25.31■■□□□ 1.64
CUL4A-209ENST00000488558 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.31■■□□□ 1.64
CUL4A-209ENST00000488558 OTOP3Q7RTS5 596 aa25.31■■□□□ 1.64
CUL4A-209ENST00000488558 FEZF2Q8TBJ5 459 aa25.31■■□□□ 1.64
CUL4A-209ENST00000488558 ACSF2Q96CM8 615 aaPredicted RBP25.31■■□□□ 1.64
CUL4A-209ENST00000488558 SNX27Q96L92 541 aa25.31■■□□□ 1.64
CUL4A-209ENST00000488558 TCHPQ9BT92 498 aa25.31■■□□□ 1.64
CUL4A-209ENST00000488558 CCDC195A0A1B0GUA6 201 aa25.3■■□□□ 1.64
CUL4A-209ENST00000488558 KCNE1P15382 129 aa25.3■■□□□ 1.64
CUL4A-209ENST00000488558 PSMD5Q16401 504 aa25.3■■□□□ 1.64
CUL4A-209ENST00000488558 UPP1Q16831 310 aa25.3■■□□□ 1.64
CUL4A-209ENST00000488558 DCLRE1AQ6PJP8 1040 aa25.3■■□□□ 1.64
CUL4A-209ENST00000488558 PRSS55Q6UWB4 352 aaPredicted RBP25.3■■□□□ 1.64
CUL4A-209ENST00000488558 PALB2Q86YC2 1186 aa25.3■■□□□ 1.64
CUL4A-209ENST00000488558 KREMEN2Q8NCW0 462 aa25.3■■□□□ 1.64
CUL4A-209ENST00000488558 LNX1Q8TBB1 728 aaPredicted RBP25.3■■□□□ 1.64
CUL4A-209ENST00000488558 ASIC4Q96FT7 647 aa25.3■■□□□ 1.64
CUL4A-209ENST00000488558 ACAP3Q96P50 834 aa25.3■■□□□ 1.64
CUL4A-209ENST00000488558 BLOC1S4Q9NUP1 217 aa25.3■■□□□ 1.64
CUL4A-209ENST00000488558 CNTN3Q9P232 1028 aa25.3■■□□□ 1.64
CUL4A-209ENST00000488558 PLCG1P19174 1290 aa25.29■■□□□ 1.64
CUL4A-209ENST00000488558 CLCNKBP51801 687 aa25.29■■□□□ 1.64
CUL4A-209ENST00000488558 NOLC1Q14978 699 aaKnown RBP eCLIP25.29■■□□□ 1.64
CUL4A-209ENST00000488558 GPBP1Q86WP2 473 aa25.29■■□□□ 1.64
CUL4A-209ENST00000488558 PBXIP1Q96AQ6 731 aa25.29■■□□□ 1.64
CUL4A-209ENST00000488558 DDX27Q96GQ7 796 aaKnown RBP25.29■■□□□ 1.64
CUL4A-209ENST00000488558 REEP2Q9BRK0 252 aa25.29■■□□□ 1.64
CUL4A-209ENST00000488558 CCSER1Q9C0I3 900 aa25.29■■□□□ 1.64
CUL4A-209ENST00000488558 WDR6Q9NNW5 1121 aaKnown RBP25.29■■□□□ 1.64
CUL4A-209ENST00000488558 KMT2EQ8IZD2 1858 aa25.29■■□□□ 1.64
CUL4A-209ENST00000488558 TRAPPC3O43617 180 aa25.28■■□□□ 1.64
CUL4A-209ENST00000488558 B3GAT3O94766 335 aa25.28■■□□□ 1.64
CUL4A-209ENST00000488558 RPL17P18621 184 aaKnown RBP25.28■■□□□ 1.64
CUL4A-209ENST00000488558 SYT1P21579 422 aa25.28■■□□□ 1.64
CUL4A-209ENST00000488558 FGFR3P22607 806 aa25.28■■□□□ 1.64
CUL4A-209ENST00000488558 ZNF131P52739 623 aa25.28■■□□□ 1.64
CUL4A-209ENST00000488558 OSTNP61366 133 aa25.28■■□□□ 1.64
CUL4A-209ENST00000488558 GRIN1Q05586 938 aa25.28■■□□□ 1.64
CUL4A-209ENST00000488558 LRRC15Q8TF66 581 aa25.28■■□□□ 1.64
CUL4A-209ENST00000488558 RAD54LQ92698 747 aa25.28■■□□□ 1.64
CUL4A-209ENST00000488558 STAMQ92783 540 aa25.28■■□□□ 1.64
CUL4A-209ENST00000488558 ZNF707Q96C28 371 aaPredicted RBP25.28■■□□□ 1.64
CUL4A-209ENST00000488558 CLSTN3Q9BQT9 956 aa25.28■■□□□ 1.64
CUL4A-209ENST00000488558 FBXW11Q9UKB1 542 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms