RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 CCL16O15467 120 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 EPB41L2O43491 1005 aaKnown RBP15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 C8AP07357 584 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 POU2F2P09086 479 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 TGM1P22735 817 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 HOXA9P31269 272 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 NCBP1Q09161 790 aaKnown RBP15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 RAB33AQ14088 237 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 MLF2Q15773 248 aaPredicted RBP15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 PSMD5Q16401 504 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 FAM187BQ17R55 369 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 ZNF528Q3MIS6 628 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 CDCA2Q69YH5 1023 aaPredicted RBP15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 SLFN12Q8IYM2 578 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 ZNF687Q8N1G0 1237 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 ZBTB44Q8NCP5 570 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 CLDN23Q96B33 292 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 OSBPL6Q9BZF3 934 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 TRIM6Q9C030 488 aaPredicted RBP15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 POLR3FQ9H1D9 316 aaPredicted RBP15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 PDZD7Q9H5P4 517 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 STK36Q9NRP7 1315 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 SNTG2Q9NY99 539 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 TPCN1Q9ULQ1 816 aa15.81■□□□□ 0.12
SDCCAG3-211ENST00000486441 SF3B1O75533 1304 aaKnown RBP eCLIP15.8■□□□□ 0.12
SDCCAG3-211ENST00000486441 PFKFB2O60825 505 aa15.8■□□□□ 0.12
SDCCAG3-211ENST00000486441 REC8O95072 547 aa15.8■□□□□ 0.12
SDCCAG3-211ENST00000486441 FGFR3P22607 806 aa15.8■□□□□ 0.12
SDCCAG3-211ENST00000486441 RFX1P22670 979 aa15.8■□□□□ 0.12
SDCCAG3-211ENST00000486441 CREMQ03060 361 aa15.8■□□□□ 0.12
SDCCAG3-211ENST00000486441 PRKCQQ04759 706 aa15.8■□□□□ 0.12
SDCCAG3-211ENST00000486441 NPAS3Q8IXF0 933 aa15.8■□□□□ 0.12
SDCCAG3-211ENST00000486441 BSNDQ8WZ55 320 aa15.8■□□□□ 0.12
SDCCAG3-211ENST00000486441 SHDQ96IW2 340 aa15.8■□□□□ 0.12
SDCCAG3-211ENST00000486441 LTB4R2Q9NPC1 389 aa15.8■□□□□ 0.12
SDCCAG3-211ENST00000486441 FBXO4Q9UKT5 387 aa15.8■□□□□ 0.12
SDCCAG3-211ENST00000486441 PCDHA12Q9UN75 941 aa15.8■□□□□ 0.12
SDCCAG3-211ENST00000486441 MIA3Q5JRA6 1907 aa15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 FAM170BA6NMN3 283 aa15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 LILRB5O75023 590 aa15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 XRCC6P12956 609 aaKnown RBP eCLIP15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 RSPO4Q2I0M5 234 aaPredicted RBP15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 PPM1LQ5SGD2 360 aa15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 AXDND1Q5T1B0 1012 aaPredicted RBP15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 EEF1DP3Q658K8 133 aa15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 ZC3H14Q6PJT7 736 aaKnown RBP15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 CPLX2Q6PUV4 134 aaKnown RBP15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 CEP57Q86XR8 500 aa15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 HACE1Q8IYU2 909 aa15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 PRIMPOLQ96LW4 560 aa15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 NAP1L4Q99733 375 aaKnown RBP15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 KXD1Q9BQD3 176 aa15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 TTC12Q9H892 705 aaPredicted RBP15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 PDRG1Q9NUG6 133 aa15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 CFAP47Q6ZTR5 3102 aa15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 USP24Q9UPU5 2620 aa15.79■□□□□ 0.12
SDCCAG3-211ENST00000486441 MARCH6O60337 910 aa15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 RECQL4O94761 1208 aa15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 BAG4O95429 457 aaKnown RBP15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 TARSP26639 723 aaKnown RBP15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 OR1D2P34982 312 aa15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 SLC5A9Q2M3M2 681 aa15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 UVSSAQ2YD98 709 aa15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 VARS2Q5ST30 1063 aaKnown RBP15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 MAEAQ7L5Y9 396 aa15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 NOSTRINQ8IVI9 506 aa15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 SLC7A14Q8TBB6 771 aa15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 CCDC113Q9H0I3 377 aa15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 TMEM60Q9H2L4 133 aa15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 PRMT7Q9NVM4 692 aaPredicted RBP15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 SPATA6Q9NWH7 488 aaPredicted RBP15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 MTRRQ9UBK8 725 aa15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 KCNH3Q9ULD8 1083 aa15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 PATJQ8NI35 1801 aa15.78■□□□□ 0.12
SDCCAG3-211ENST00000486441 USO1O60763 962 aaKnown RBP15.77■□□□□ 0.12
SDCCAG3-211ENST00000486441 KINO60870 393 aaKnown RBP15.77■□□□□ 0.12
SDCCAG3-211ENST00000486441 MED24O75448 989 aa15.77■□□□□ 0.12
SDCCAG3-211ENST00000486441 THP07101 528 aa15.77■□□□□ 0.12
SDCCAG3-211ENST00000486441 TDGF1P13385 188 aa15.77■□□□□ 0.12
SDCCAG3-211ENST00000486441 TXKP42681 527 aa15.77■□□□□ 0.12
SDCCAG3-211ENST00000486441 CSTF1Q05048 431 aaKnown RBP15.77■□□□□ 0.12
SDCCAG3-211ENST00000486441 LIN9Q5TKA1 542 aa15.77■□□□□ 0.12
SDCCAG3-211ENST00000486441 MTSS1LQ765P7 747 aa15.77■□□□□ 0.12
SDCCAG3-211ENST00000486441 CATSPER3Q86XQ3 398 aa15.77■□□□□ 0.12
SDCCAG3-211ENST00000486441 C3orf58Q8NDZ4 430 aa15.77■□□□□ 0.12
SDCCAG3-211ENST00000486441 PPP1R10Q96QC0 940 aaKnown RBP15.77■□□□□ 0.12
SDCCAG3-211ENST00000486441 BCO2Q9BYV7 579 aa15.77■□□□□ 0.12
SDCCAG3-211ENST00000486441 TRIP11Q15643 1979 aa15.76■□□□□ 0.11
SDCCAG3-211ENST00000486441 CEP295Q9C0D2 2601 aa15.76■□□□□ 0.11
SDCCAG3-211ENST00000486441 LRRIQ4A6NIV6 560 aa15.76■□□□□ 0.11
SDCCAG3-211ENST00000486441 BTBD18B2RXH4 712 aa15.76■□□□□ 0.11
SDCCAG3-211ENST00000486441 TMEM189-UBE2V1I3L0A0 370 aa15.76■□□□□ 0.11
SDCCAG3-211ENST00000486441 ACKR2O00590 384 aa15.76■□□□□ 0.11
SDCCAG3-211ENST00000486441 LAMTOR5O43504 91 aa15.76■□□□□ 0.11
SDCCAG3-211ENST00000486441 TBC1D4O60343 1298 aa15.76■□□□□ 0.11
SDCCAG3-211ENST00000486441 FCARP24071 287 aa15.76■□□□□ 0.11
SDCCAG3-211ENST00000486441 ATXN1P54253 815 aaKnown RBP15.76■□□□□ 0.11
SDCCAG3-211ENST00000486441 UBXN2BQ14CS0 331 aa15.76■□□□□ 0.11
SDCCAG3-211ENST00000486441 CALCRLQ16602 461 aa15.76■□□□□ 0.11
SDCCAG3-211ENST00000486441 NT5DC1Q5TFE4 455 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms