RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 LIG4P49917 911 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 NCKAP1LP55160 1127 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 KCNC3Q14003 757 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 USP41Q3LFD5 358 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 SEZ6Q53EL9 994 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 CES5AQ6NT32 575 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 KANK3Q6NY19 840 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 CCDC73Q6ZRK6 1079 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 GLYCTKQ8IVS8 523 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 PDILTQ8N807 584 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 LINC00301Q8NCQ3 95 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 SLC22A17Q8WUG5 538 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 RIN2Q8WYP3 895 aaPredicted RBP12.08□□□□□ -0.48
SNX21-211ENST00000486336 RPGRIP1Q96KN7 1286 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 S1PR5Q9H228 398 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 STK17AQ9UEE5 414 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 SMIM28A0A1B0GU29 152 aa12.07□□□□□ -0.48
SNX21-211ENST00000486336 TULP1O00294 542 aaPredicted RBP12.07□□□□□ -0.48
SNX21-211ENST00000486336 LILRB3O75022 631 aa12.07□□□□□ -0.48
SNX21-211ENST00000486336 TOM1L1O75674 476 aa12.07□□□□□ -0.48
SNX21-211ENST00000486336 KIF4AO95239 1232 aa12.07□□□□□ -0.48
SNX21-211ENST00000486336 F13A1P00488 732 aa12.07□□□□□ -0.48
SNX21-211ENST00000486336 PDIA4P13667 645 aaKnown RBP12.07□□□□□ -0.48
SNX21-211ENST00000486336 SP100P23497 879 aaPredicted RBP12.07□□□□□ -0.48
SNX21-211ENST00000486336 NMT1P30419 496 aaKnown RBP12.07□□□□□ -0.48
SNX21-211ENST00000486336 DSG1Q02413 1049 aa12.07□□□□□ -0.48
SNX21-211ENST00000486336 NOLC1Q14978 699 aaKnown RBP eCLIP12.07□□□□□ -0.48
SNX21-211ENST00000486336 FAM171A1Q5VUB5 890 aa12.07□□□□□ -0.48
SNX21-211ENST00000486336 KIAA0319Q5VV43 1072 aa12.07□□□□□ -0.48
SNX21-211ENST00000486336 PALB2Q86YC2 1186 aa12.07□□□□□ -0.48
SNX21-211ENST00000486336 DDX12PQ92771 950 aa12.07□□□□□ -0.48
SNX21-211ENST00000486336 KHSRPQ92945 711 aaKnown RBP eCLIP12.07□□□□□ -0.48
SNX21-211ENST00000486336 FBXL18Q96ME1 805 aa12.07□□□□□ -0.48
SNX21-211ENST00000486336 PHF7Q9BWX1 381 aaPredicted RBP12.07□□□□□ -0.48
SNX21-211ENST00000486336 GOLGA2P5Q9HBQ8 144 aa12.07□□□□□ -0.48
SNX21-211ENST00000486336 DZANK1Q9NVP4 752 aa12.07□□□□□ -0.48
SNX21-211ENST00000486336 CDH22Q9UJ99 828 aa12.07□□□□□ -0.48
SNX21-211ENST00000486336 TBX20Q9UMR3 447 aa12.07□□□□□ -0.48
SNX21-211ENST00000486336 SF3B1O75533 1304 aaKnown RBP eCLIP12.07□□□□□ -0.48
SNX21-211ENST00000486336 MYMKA6NI61 221 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 C19orf67A6NJJ6 358 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 HNRNPDLO14979 420 aaKnown RBP12.06□□□□□ -0.48
SNX21-211ENST00000486336 TEX28O15482 410 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 B3GAT3O94766 335 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 ADH1AP07327 375 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 SPATA31D3P0C874 917 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 IDEP14735 1019 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 RPL17P18621 184 aaKnown RBP12.06□□□□□ -0.48
SNX21-211ENST00000486336 PROZP22891 400 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 CLCN4P51793 760 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 CLCNKBP51801 687 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 ZNF131P52739 623 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 ITIH3Q06033 890 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 CBX2Q14781 532 aaPredicted RBP12.06□□□□□ -0.48
SNX21-211ENST00000486336 NAB2Q15742 525 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 ZC2HC1CQ53FD0 456 aaPredicted RBP12.06□□□□□ -0.48
SNX21-211ENST00000486336 DCLRE1AQ6PJP8 1040 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 PRSS55Q6UWB4 352 aaPredicted RBP12.06□□□□□ -0.48
SNX21-211ENST00000486336 TMC5Q6UXY8 1006 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 ZPBP2Q6X784 338 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 SPATA31D4Q6ZUB0 917 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 SFR1Q86XK3 245 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 SUSD6Q92537 303 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 FAM212AQ96EL1 285 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 PPP1R10Q96QC0 940 aaKnown RBP12.06□□□□□ -0.48
SNX21-211ENST00000486336 ADAM7Q9H2U9 754 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 TSHZ2Q9NRE2 1034 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 SLC38A7Q9NVC3 462 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 TBC1D7Q9P0N9 293 aa12.06□□□□□ -0.48
SNX21-211ENST00000486336 A0A087X0B3 334 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 ABLIM1O14639 778 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 CUTAO60888 179 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 PPP6R2O75170 966 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 YEATS4O95619 227 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 BRD1O95696 1058 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 GLUD1P00367 558 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 SPAG1Q07617 926 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 MCL1Q07820 350 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 ELAVL2Q12926 359 aaKnown RBP12.05□□□□□ -0.48
SNX21-211ENST00000486336 PKP1Q13835 747 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 ATAT1Q5SQI0 421 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 ALKAL1Q6UXT8 129 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 RNF135Q8IUD6 432 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 RNF168Q8IYW5 571 aaPredicted RBP12.05□□□□□ -0.48
SNX21-211ENST00000486336 STAMQ92783 540 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 C18orf25Q96B23 403 aaPredicted RBP12.05□□□□□ -0.48
SNX21-211ENST00000486336 SNX27Q96L92 541 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 RIPOR3Q96MK2 946 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 UROC1Q96N76 676 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 TTPALQ9BTX7 342 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 C1QTNF1Q9BXJ1 281 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 HAPLN2Q9GZV7 340 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 MRPL44Q9H9J2 332 aaKnown RBP12.05□□□□□ -0.48
SNX21-211ENST00000486336 RXFP1Q9HBX9 757 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.05□□□□□ -0.48
SNX21-211ENST00000486336 CHST7Q9NS84 486 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 MORC2Q9Y6X9 1032 aaPredicted RBP12.05□□□□□ -0.48
SNX21-211ENST00000486336 TRIP11Q15643 1979 aa12.05□□□□□ -0.48
SNX21-211ENST00000486336 BDP1A6H8Y1 2624 aa12.04□□□□□ -0.48
SNX21-211ENST00000486336 FAM86C2PA6NEL3 165 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms