RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 LLPHQ9BRT6 129 aaKnown RBP10.96□□□□□ -0.65
SND1-213ENST00000486037 SCNM1Q9BWG6 230 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 PCDHA10Q9Y5I2 948 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 SPAG17Q6Q759 2223 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 TMEM8BA6NDV4 472 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 FOXD2O60548 495 aaPredicted RBP10.95□□□□□ -0.66
SND1-213ENST00000486037 DDAH1O94760 285 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 EPN2O95208 641 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 C1RP00736 705 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 PSAPP07602 524 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 CEBPBP17676 345 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 HOXA11P31270 313 aaPredicted RBP10.95□□□□□ -0.66
SND1-213ENST00000486037 ADD1P35611 737 aaKnown RBP10.95□□□□□ -0.66
SND1-213ENST00000486037 ZNF76P36508 570 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 MLH1P40692 756 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 SCNN1GP51170 649 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 C1QBPQ07021 282 aaKnown RBP10.95□□□□□ -0.66
SND1-213ENST00000486037 PLA2G2CQ5R387 149 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 PPM1LQ5SGD2 360 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 SYNE3Q6ZMZ3 975 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 CEP68Q76N32 757 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 NIPA1Q7RTP0 329 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 ZNF710Q8N1W2 664 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 FAM3CQ92520 227 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 FAM167AQ96KS9 214 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 ZFP42Q96MM3 310 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 GAD1Q99259 594 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 MAP3K14Q99558 947 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 CLSTN3Q9BQT9 956 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 ZNF577Q9BSK1 485 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 MINDY3Q9H8M7 445 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 RIC8AQ9NPQ8 531 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 AGPAT5Q9NUQ2 364 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 KANSL3Q9P2N6 904 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 ZDHHC9Q9Y397 364 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 ADAMTS20P59510 1910 aa10.95□□□□□ -0.66
SND1-213ENST00000486037 CNTNAP2Q9UHC6 1331 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 IGKV6-21A0A0C4DH24 114 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 ARL5CA6NH57 179 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 STBD1O95210 358 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 HNRNPA1P09651 372 aaKnown RBP eCLIP10.94□□□□□ -0.66
SND1-213ENST00000486037 FDPSP14324 419 aaKnown RBP10.94□□□□□ -0.66
SND1-213ENST00000486037 RAP1GAPP47736 663 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 CLK2P49760 499 aaKnown RBP10.94□□□□□ -0.66
SND1-213ENST00000486037 RCAN1P53805 252 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 PPP2R5DQ14738 602 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 NTRK3Q16288 839 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 RTN1Q16799 776 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 USP41Q3LFD5 358 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 MTERF2Q49AM1 385 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 KBTBD6Q86V97 674 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 RHPN2Q8IUC4 686 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 SLC7A14Q8TBB6 771 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 CRYGNQ8WXF5 182 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 DNASE1L2Q92874 299 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 NLRP4Q96MN2 994 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 BBC3Q96PG8 261 aaPredicted RBP10.94□□□□□ -0.66
SND1-213ENST00000486037 PAAF1Q9BRP4 392 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 EIF2AQ9BY44 585 aaKnown RBP10.94□□□□□ -0.66
SND1-213ENST00000486037 IFT122Q9HBG6 1241 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.94□□□□□ -0.66
SND1-213ENST00000486037 HES2Q9Y543 173 aa10.94□□□□□ -0.66
SND1-213ENST00000486037 MAN2B1O00754 1011 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 SYT1P21579 422 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 CNR2P34972 360 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 PXNP49023 591 aaPredicted RBP10.93□□□□□ -0.66
SND1-213ENST00000486037 NUCB2P80303 420 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 PTGDRQ13258 359 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 PABPC1LQ4VXU2 614 aaKnown RBP10.93□□□□□ -0.66
SND1-213ENST00000486037 LIN9Q5TKA1 542 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 RNF43Q68DV7 783 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 KIAA1211LQ6NV74 962 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 C19orf48Q6RUI8 117 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 MAP4K3Q8IVH8 894 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 SMAP1Q8IYB5 467 aaPredicted RBP10.93□□□□□ -0.66
SND1-213ENST00000486037 SPEM1Q8N4L4 309 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 FANCBQ8NB91 859 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 HASPINQ8TF76 798 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 GJA10Q969M2 543 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 ELSPBP1Q96BH3 223 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 LZTS2Q9BRK4 669 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 IER2Q9BTL4 223 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 ZNF334Q9HCZ1 680 aaPredicted RBP10.93□□□□□ -0.66
SND1-213ENST00000486037 NRBP2Q9NSY0 501 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 SUCLA2Q9P2R7 463 aaPredicted RBP10.93□□□□□ -0.66
SND1-213ENST00000486037 SAMM50Q9Y512 469 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 PIAS3Q9Y6X2 628 aa10.93□□□□□ -0.66
SND1-213ENST00000486037 TDRD15B5MCY1 1934 aaKnown RBP10.93□□□□□ -0.66
SND1-213ENST00000486037 VWA8A3KMH1 1905 aa10.92□□□□□ -0.66
SND1-213ENST00000486037 C4orf47A7E2U8 309 aa10.92□□□□□ -0.66
SND1-213ENST00000486037 CPLX1O14810 134 aa10.92□□□□□ -0.66
SND1-213ENST00000486037 PAPSS2O95340 614 aaPredicted RBP10.92□□□□□ -0.66
SND1-213ENST00000486037 CALM1P0DP23 149 aa10.92□□□□□ -0.66
SND1-213ENST00000486037 CALM2P0DP24 149 aa10.92□□□□□ -0.66
SND1-213ENST00000486037 CALM3P0DP25 149 aa10.92□□□□□ -0.66
SND1-213ENST00000486037 CCNE1P24864 410 aa10.92□□□□□ -0.66
SND1-213ENST00000486037 HOXA9P31269 272 aa10.92□□□□□ -0.66
SND1-213ENST00000486037 SOX9P48436 509 aa10.92□□□□□ -0.66
SND1-213ENST00000486037 ADCY7P51828 1080 aa10.92□□□□□ -0.66
SND1-213ENST00000486037 NAPAP54920 295 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms