RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 RCOR1Q9UKL0 485 aa6.32□□□□□ -1.4
CUX1-208ENST00000485792 DNM3Q9UQ16 869 aa6.32□□□□□ -1.4
CUX1-208ENST00000485792 PCDHB7Q9Y5E2 793 aa6.32□□□□□ -1.4
CUX1-208ENST00000485792 WDFY4Q6ZS81 3184 aa6.32□□□□□ -1.4
CUX1-208ENST00000485792 USP34Q70CQ2 3546 aa6.32□□□□□ -1.4
CUX1-208ENST00000485792 CNTNAP2Q9UHC6 1331 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 FAM237AA0A1B0GTK4 181 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 FRMD3A2A2Y4 597 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 DENND3A2RUS2 1198 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 ARHGEF35A5YM69 484 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 SFI1A8K8P3 1242 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 FSCN2O14926 492 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 HIP1RO75146 1068 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 DDHD2O94830 711 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 YEATS4O95619 227 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 ADRB2P07550 413 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 SRGAP2CP0DJJ0 459 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 FOSL2P15408 326 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 ZSCAN20P17040 1043 aaPredicted RBP6.31□□□□□ -1.4
CUX1-208ENST00000485792 SCP2P22307 547 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 HOXD13P35453 343 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 NPTX2P47972 431 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 EFNA5P52803 228 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 NCKAP1LP55160 1127 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 CEBPZQ03701 1054 aaKnown RBP6.31□□□□□ -1.4
CUX1-208ENST00000485792 UBE3AQ05086 875 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 DNM1Q05193 864 aaKnown RBP6.31□□□□□ -1.4
CUX1-208ENST00000485792 SOX4Q06945 474 aaPredicted RBP6.31□□□□□ -1.4
CUX1-208ENST00000485792 DSC1Q08554 894 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 VAC14Q08AM6 782 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 KCNA1Q09470 495 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 RAD51AP2Q09MP3 1159 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 GIT2Q14161 759 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 TFDP1Q14186 410 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 BTG3Q14201 252 aaPredicted RBP6.31□□□□□ -1.4
CUX1-208ENST00000485792 AGERQ15109 404 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 FOXD4L6Q3SYB3 417 aaPredicted RBP6.31□□□□□ -1.4
CUX1-208ENST00000485792 XKR4Q5GH76 650 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 ALKAL1Q6UXT8 129 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 FOXD4L3Q6VB84 417 aaPredicted RBP6.31□□□□□ -1.4
CUX1-208ENST00000485792 CATSPER4Q7RTX7 472 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 CABP7Q86V35 215 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 RNF168Q8IYW5 571 aaPredicted RBP6.31□□□□□ -1.4
CUX1-208ENST00000485792 TMEM161BQ8NDZ6 487 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 CNNM3Q8NE01 707 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 ADAM32Q8TC27 787 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 HELQQ8TDG4 1101 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 HPS3Q969F9 1004 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 DNAJC19Q96DA6 116 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 ZFP42Q96MM3 310 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 NECAB3Q96P71 396 aaPredicted RBP6.31□□□□□ -1.4
CUX1-208ENST00000485792 GAS2L1Q99501 681 aaPredicted RBP6.31□□□□□ -1.4
CUX1-208ENST00000485792 REEP2Q9BRK0 252 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 CD320Q9NPF0 282 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 TYW1Q9NV66 732 aaKnown RBP6.31□□□□□ -1.4
CUX1-208ENST00000485792 PRMT7Q9NVM4 692 aaPredicted RBP6.31□□□□□ -1.4
CUX1-208ENST00000485792 ODF2LQ9ULJ1 636 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 LZTS1Q9Y250 596 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 PCDHB2Q9Y5E7 798 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 IRAK3Q9Y616 596 aa6.31□□□□□ -1.4
CUX1-208ENST00000485792 ZNF318Q5VUA4 2279 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 KIF26AQ9ULI4 1882 aaPredicted RBP6.3□□□□□ -1.4
CUX1-208ENST00000485792 CARNS1A5YM72 827 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 FAM187AA6NFU0 413 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 MYMKA6NI61 221 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 PIGRP01833 764 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 PLA2G4BP0C869 781 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 MAPTP10636 758 aaKnown RBP6.3□□□□□ -1.4
CUX1-208ENST00000485792 PLS3P13797 630 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 IBSPP21815 317 aaPredicted RBP6.3□□□□□ -1.4
CUX1-208ENST00000485792 VARSP26640 1264 aaKnown RBP6.3□□□□□ -1.4
CUX1-208ENST00000485792 KCNQ1P51787 676 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 ERVFC1P60507 584 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 EHHADHQ08426 723 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 GPM6BQ13491 265 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 PPP2R5AQ15172 486 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 NOTUMQ6P988 496 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 SLC27A1Q6PCB7 646 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 HSCBQ8IWL3 235 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 GPR65Q8IYL9 337 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 GRAMD1CQ8IYS0 662 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 CYP4X1Q8N118 509 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 COLGALT1Q8NBJ5 622 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 EHBP1Q8NDI1 1231 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 C3orf58Q8NDZ4 430 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 RABGGTAQ92696 567 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 RAD54LQ92698 747 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 ZBTB45Q96K62 511 aaPredicted RBP6.3□□□□□ -1.4
CUX1-208ENST00000485792 DRC1Q96MC2 740 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 C11orf84Q9BUA3 381 aaPredicted RBP6.3□□□□□ -1.4
CUX1-208ENST00000485792 GZF1Q9H116 711 aaPredicted RBP6.3□□□□□ -1.4
CUX1-208ENST00000485792 C2orf40Q9H1Z8 148 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 ALG13Q9NP73 1137 aaKnown RBP6.3□□□□□ -1.4
CUX1-208ENST00000485792 UBN1Q9NPG3 1134 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 TBC1D13Q9NVG8 400 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 KBTBD4Q9NVX7 518 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 TFIP11Q9UBB9 837 aaKnown RBP6.3□□□□□ -1.4
CUX1-208ENST00000485792 STK17AQ9UEE5 414 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 KCNG1Q9UIX4 513 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 PIN4Q9Y237 131 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms