RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 OGTO15294 1046 aa14.26□□□□□ -0.13
CPNE1-225ENST00000483495 ATP8B1O43520 1251 aa14.26□□□□□ -0.13
CPNE1-225ENST00000483495 RHOXF2BP0C7M4 288 aa14.26□□□□□ -0.13
CPNE1-225ENST00000483495 CYP11B1P15538 503 aa14.26□□□□□ -0.13
CPNE1-225ENST00000483495 CXCR5P32302 372 aa14.26□□□□□ -0.13
CPNE1-225ENST00000483495 USP8P40818 1118 aa14.26□□□□□ -0.13
CPNE1-225ENST00000483495 MATR3P43243 847 aaKnown RBP eCLIP14.26□□□□□ -0.13
CPNE1-225ENST00000483495 CLCN3P51790 818 aa14.26□□□□□ -0.13
CPNE1-225ENST00000483495 AP3M2P53677 418 aa14.26□□□□□ -0.13
CPNE1-225ENST00000483495 HADHBP55084 474 aaKnown RBP14.26□□□□□ -0.13
CPNE1-225ENST00000483495 LMBRD2Q68DH5 695 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-225ENST00000483495 SLC47A2Q86VL8 602 aa14.26□□□□□ -0.13
CPNE1-225ENST00000483495 IFNLR1Q8IU57 520 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-225ENST00000483495 SYCE1Q8N0S2 351 aa14.26□□□□□ -0.13
CPNE1-225ENST00000483495 RHOXF2Q9BQY4 288 aa14.26□□□□□ -0.13
CPNE1-225ENST00000483495 PI4K2AQ9BTU6 479 aa14.26□□□□□ -0.13
CPNE1-225ENST00000483495 STXBP5LQ9Y2K9 1186 aa14.26□□□□□ -0.13
CPNE1-225ENST00000483495 TMCO5BA8MYB1 307 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 KIF4AO95239 1232 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 SMPD1P17405 629 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 PAFAH1B1P43034 410 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 HUNKP57058 714 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 FMO1Q01740 532 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 CDR2Q01850 454 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 MBTD1Q05BQ5 628 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 ACVR2BQ13705 512 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 FAM187BQ17R55 369 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 WDR44Q5JSH3 913 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 IQSEC1Q6DN90 963 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 RASAL3Q86YV0 1011 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 SPATA4Q8NEY3 305 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 NPLOC4Q8TAT6 608 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 SLC35G2Q8TBE7 412 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 DDX1Q92499 740 aaKnown RBP14.25□□□□□ -0.13
CPNE1-225ENST00000483495 PCDHB18PQ96TA0 734 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 THAP2Q9H0W7 228 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 ABCB6Q9NP58 842 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.25□□□□□ -0.131e-6■■■■■ 172.6
CPNE1-225ENST00000483495 SEPT11Q9NVA2 429 aaKnown RBP14.25□□□□□ -0.13
CPNE1-225ENST00000483495 SLC5A4Q9NY91 659 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 CPSF3Q9UKF6 684 aaKnown RBP14.25□□□□□ -0.13
CPNE1-225ENST00000483495 RTN2O75298 545 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 PIK3CAP42336 1068 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 PDE6CP51160 858 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 RPS6KA1Q15418 735 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 CFAP221Q4G0U5 840 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 MORN1Q5T089 497 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 MPZL3Q6UWV2 235 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 WDR49Q8IV35 697 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 RHOT2Q8IXI1 618 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 METTL13Q8N6R0 699 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 DHX38Q92620 1227 aaKnown RBP14.25□□□□□ -0.13
CPNE1-225ENST00000483495 ARHGEF26Q96DR7 871 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 FAM84AQ96KN4 292 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 NLRP4Q96MN2 994 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 PSMB7Q99436 277 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 ARFGAP3Q9NP61 516 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 OGFRQ9NZT2 677 aa14.25□□□□□ -0.13
CPNE1-225ENST00000483495 MANSC4A6NHS7 340 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-225ENST00000483495 FTLP02792 175 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-225ENST00000483495 GJB1P08034 283 aa14.24□□□□□ -0.13
CPNE1-225ENST00000483495 TNFSF9P41273 254 aa14.24□□□□□ -0.13
CPNE1-225ENST00000483495 BIRC3Q13489 604 aa14.24□□□□□ -0.13
CPNE1-225ENST00000483495 SURF1Q15526 300 aa14.24□□□□□ -0.13
CPNE1-225ENST00000483495 CCDC181Q5TID7 509 aa14.24□□□□□ -0.13
CPNE1-225ENST00000483495 ATF7IP2Q5U623 682 aa14.24□□□□□ -0.13
CPNE1-225ENST00000483495 SMYD5Q6GMV2 418 aa14.24□□□□□ -0.13
CPNE1-225ENST00000483495 NT5DC3Q86UY8 548 aa14.24□□□□□ -0.13
CPNE1-225ENST00000483495 OR5B17Q8NGF7 314 aa14.24□□□□□ -0.13
CPNE1-225ENST00000483495 ZBTB10Q96DT7 871 aa14.24□□□□□ -0.13
CPNE1-225ENST00000483495 TCHPQ9BT92 498 aa14.24□□□□□ -0.13
CPNE1-225ENST00000483495 IFT122Q9HBG6 1241 aa14.24□□□□□ -0.13
CPNE1-225ENST00000483495 OSGEPQ9NPF4 335 aa14.24□□□□□ -0.13
CPNE1-225ENST00000483495 NMRK2Q9NPI5 230 aa14.24□□□□□ -0.13
CPNE1-225ENST00000483495 PRMT7Q9NVM4 692 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-225ENST00000483495 PACSIN2Q9UNF0 486 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-225ENST00000483495 TNFSF13BQ9Y275 285 aa14.24□□□□□ -0.13
CPNE1-225ENST00000483495 H3BRB1 525 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 TULP1O00294 542 aaPredicted RBP14.23□□□□□ -0.13
CPNE1-225ENST00000483495 IGF2BP3O00425 579 aaKnown RBP eCLIP14.23□□□□□ -0.132e-7■■■■□ 20.3
CPNE1-225ENST00000483495 MMP3P08254 477 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 MMEP08473 750 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 ZNF286BP0CG31 522 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 ACO1P21399 889 aaKnown RBP14.23□□□□□ -0.13
CPNE1-225ENST00000483495 ABCB4P21439 1286 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 PHKA2P46019 1235 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 VSNL1P62760 191 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 C2orf54Q08AI8 447 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 SEZ6Q53EL9 994 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 ZBTB33Q86T24 672 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 RUBCNQ92622 972 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 PBKQ96KB5 322 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 TUT1Q9H6E5 874 aaKnown RBP14.23□□□□□ -0.13
CPNE1-225ENST00000483495 MINDY3Q9H8M7 445 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 APOBEC3GQ9HC16 384 aaKnown RBP14.23□□□□□ -0.13
CPNE1-225ENST00000483495 ACP6Q9NPH0 428 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 CNTN6Q9UQ52 1028 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 INO80B-WBP1J3KQ70 363 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 BUB1BO60566 1050 aaPredicted RBP14.23□□□□□ -0.13
CPNE1-225ENST00000483495 ERLIN1O75477 346 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms