RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ABCD1P33897 745 aa21.79■■□□□ 1.08
MSH5-215ENST00000482280 CEBPZQ03701 1054 aaKnown RBP21.79■■□□□ 1.08
MSH5-215ENST00000482280 FAM171A1Q5VUB5 890 aa21.79■■□□□ 1.08
MSH5-215ENST00000482280 HSCBQ8IWL3 235 aa21.79■■□□□ 1.08
MSH5-215ENST00000482280 RNF168Q8IYW5 571 aaPredicted RBP21.79■■□□□ 1.08
MSH5-215ENST00000482280 MYCT1Q8N699 235 aa21.79■■□□□ 1.08
MSH5-215ENST00000482280 EDAQ92838 391 aa21.79■■□□□ 1.08
MSH5-215ENST00000482280 ACSF2Q96CM8 615 aaPredicted RBP21.79■■□□□ 1.08
MSH5-215ENST00000482280 B3GALT6Q96L58 329 aa21.79■■□□□ 1.08
MSH5-215ENST00000482280 TTPALQ9BTX7 342 aa21.79■■□□□ 1.08
MSH5-215ENST00000482280 RXFP1Q9HBX9 757 aa21.79■■□□□ 1.08
MSH5-215ENST00000482280 FNIP2Q9P278 1114 aa21.79■■□□□ 1.08
MSH5-215ENST00000482280 CACNG4Q9UBN1 327 aa21.79■■□□□ 1.08
MSH5-215ENST00000482280 CLIC4Q9Y696 253 aa21.79■■□□□ 1.08
MSH5-215ENST00000482280 MUC3AQ02505 3323 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 CLDN3O15551 220 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 B3GAT3O94766 335 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 CACNB1Q02641 598 aaPredicted RBP21.78■■□□□ 1.08
MSH5-215ENST00000482280 NOLC1Q14978 699 aaKnown RBP eCLIP21.78■■□□□ 1.08
MSH5-215ENST00000482280 ZPBP2Q6X784 338 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 C15orf39Q6ZRI6 1047 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 CCDC149Q6ZUS6 474 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 GPR149Q86SP6 731 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 PALB2Q86YC2 1186 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 GLYCTKQ8IVS8 523 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 PLCD3Q8N3E9 789 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 KRI1Q8N9T8 703 aaKnown RBP21.78■■□□□ 1.08
MSH5-215ENST00000482280 TMEM161BQ8NDZ6 487 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 RAD54LQ92698 747 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 DDX27Q96GQ7 796 aaKnown RBP21.78■■□□□ 1.08
MSH5-215ENST00000482280 REEP2Q9BRK0 252 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 PLEKHA4Q9H4M7 779 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 PIDD1Q9HB75 910 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 PARVGQ9HBI0 331 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 C11orf16Q9NQ32 467 aa21.78■■□□□ 1.08
MSH5-215ENST00000482280 NPHP3-ACAD11A0A0J9YXS1 232 aa21.77■■□□□ 1.08
MSH5-215ENST00000482280 K7ENM7 598 aa21.77■■□□□ 1.08
MSH5-215ENST00000482280 STX6O43752 255 aa21.77■■□□□ 1.08
MSH5-215ENST00000482280 C1RP00736 705 aa21.77■■□□□ 1.08
MSH5-215ENST00000482280 MAPTP10636 758 aaKnown RBP21.77■■□□□ 1.08
MSH5-215ENST00000482280 MARCKSP29966 332 aaPredicted RBP21.77■■□□□ 1.08
MSH5-215ENST00000482280 LIG4P49917 911 aa21.77■■□□□ 1.08
MSH5-215ENST00000482280 MCM6Q14566 821 aa21.77■■□□□ 1.08
MSH5-215ENST00000482280 DCLRE1AQ6PJP8 1040 aa21.77■■□□□ 1.08
MSH5-215ENST00000482280 CYP26C1Q6V0L0 522 aa21.77■■□□□ 1.08
MSH5-215ENST00000482280 HDAC7Q8WUI4 952 aa21.77■■□□□ 1.08
MSH5-215ENST00000482280 LARP4BQ92615 738 aaKnown RBP21.77■■□□□ 1.08
MSH5-215ENST00000482280 STAMQ92783 540 aa21.77■■□□□ 1.08
MSH5-215ENST00000482280 PAAF1Q9BRP4 392 aa21.77■■□□□ 1.08
MSH5-215ENST00000482280 CCSER1Q9C0I3 900 aa21.77■■□□□ 1.08
MSH5-215ENST00000482280 PTPRHQ9HD43 1115 aa21.77■■□□□ 1.08
MSH5-215ENST00000482280 CDH22Q9UJ99 828 aa21.77■■□□□ 1.08
MSH5-215ENST00000482280 SMIM28A0A1B0GU29 152 aa21.76■■□□□ 1.07
MSH5-215ENST00000482280 EFEMP2O95967 443 aa21.76■■□□□ 1.07
MSH5-215ENST00000482280 RESTQ13127 1097 aa21.76■■□□□ 1.07
MSH5-215ENST00000482280 PSMD5Q16401 504 aa21.76■■□□□ 1.07
MSH5-215ENST00000482280 KANK3Q6NY19 840 aa21.76■■□□□ 1.07
MSH5-215ENST00000482280 OTOP3Q7RTS5 596 aa21.76■■□□□ 1.07
MSH5-215ENST00000482280 TAS1R3Q7RTX0 852 aa21.76■■□□□ 1.07
MSH5-215ENST00000482280 HAUS6Q7Z4H7 955 aa21.76■■□□□ 1.07
MSH5-215ENST00000482280 CEP120Q8N960 986 aa21.76■■□□□ 1.07
MSH5-215ENST00000482280 MFSD14AQ96MC6 490 aa21.76■■□□□ 1.07
MSH5-215ENST00000482280 PPP1R10Q96QC0 940 aaKnown RBP21.76■■□□□ 1.07
MSH5-215ENST00000482280 STK17AQ9UEE5 414 aa21.76■■□□□ 1.07
MSH5-215ENST00000482280 USTQ9Y2C2 406 aa21.76■■□□□ 1.07
MSH5-215ENST00000482280 CCDC195A0A1B0GUA6 201 aa21.75■■□□□ 1.07
MSH5-215ENST00000482280 HNRNPDLO14979 420 aaKnown RBP21.75■■□□□ 1.07
MSH5-215ENST00000482280 DDIT3P35638 169 aa21.75■■□□□ 1.07
MSH5-215ENST00000482280 CLCNKBP51801 687 aa21.75■■□□□ 1.07
MSH5-215ENST00000482280 ZXDAP98168 799 aa21.75■■□□□ 1.07
MSH5-215ENST00000482280 GRIN1Q05586 938 aa21.75■■□□□ 1.07
MSH5-215ENST00000482280 KYAT1Q16773 422 aa21.75■■□□□ 1.07
MSH5-215ENST00000482280 PTPN21Q16825 1174 aa21.75■■□□□ 1.07
MSH5-215ENST00000482280 ARSHQ5FYA8 562 aa21.75■■□□□ 1.07
MSH5-215ENST00000482280 LIN9Q5TKA1 542 aa21.75■■□□□ 1.07
MSH5-215ENST00000482280 RRAGBQ5VZM2 374 aa21.75■■□□□ 1.07
MSH5-215ENST00000482280 PRSS55Q6UWB4 352 aaPredicted RBP21.75■■□□□ 1.07
MSH5-215ENST00000482280 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.75■■□□□ 1.07
MSH5-215ENST00000482280 CMASQ8NFW8 434 aaPredicted RBP21.75■■□□□ 1.07
MSH5-215ENST00000482280 NUB1Q9Y5A7 615 aa21.75■■□□□ 1.07
MSH5-215ENST00000482280 SRPRBQ9Y5M8 271 aaKnown RBP21.75■■□□□ 1.07
MSH5-215ENST00000482280 C2CD4DB7Z1M9 353 aa21.74■■□□□ 1.07
MSH5-215ENST00000482280 TMEM189-UBE2V1I3L0A0 370 aa21.74■■□□□ 1.07
MSH5-215ENST00000482280 TRAK2O60296 914 aa21.74■■□□□ 1.07
MSH5-215ENST00000482280 BRD1O95696 1058 aa21.74■■□□□ 1.07
MSH5-215ENST00000482280 SPATA31D3P0C874 917 aa21.74■■□□□ 1.07
MSH5-215ENST00000482280 MYBP10242 640 aa21.74■■□□□ 1.07
MSH5-215ENST00000482280 PDIA4P13667 645 aaKnown RBP21.74■■□□□ 1.07
MSH5-215ENST00000482280 RPL17P18621 184 aaKnown RBP21.74■■□□□ 1.07
MSH5-215ENST00000482280 PROZP22891 400 aa21.74■■□□□ 1.07
MSH5-215ENST00000482280 NCKAP1LP55160 1127 aa21.74■■□□□ 1.07
MSH5-215ENST00000482280 MTMR3Q13615 1198 aa21.74■■□□□ 1.07
MSH5-215ENST00000482280 SPECC1Q5M775 1068 aa21.74■■□□□ 1.07
MSH5-215ENST00000482280 RTP2Q5QGT7 225 aa21.74■■□□□ 1.07
MSH5-215ENST00000482280 TRIM67Q6ZTA4 783 aa21.74■■□□□ 1.07
MSH5-215ENST00000482280 SPATA31D4Q6ZUB0 917 aa21.74■■□□□ 1.07
MSH5-215ENST00000482280 PIK3R5Q8WYR1 880 aa21.74■■□□□ 1.07
MSH5-215ENST00000482280 SMG7Q92540 1137 aaKnown RBP21.74■■□□□ 1.07
MSH5-215ENST00000482280 SNX27Q96L92 541 aa21.74■■□□□ 1.07
MSH5-215ENST00000482280 BLOC1S4Q9NUP1 217 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms