RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 DSG1Q02413 1049 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 CREMQ03060 361 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 ITIH3Q06033 890 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 CBX2Q14781 532 aaPredicted RBP13.01□□□□□ -0.33
HMGN1-213ENST00000482192 NOLC1Q14978 699 aaKnown RBP eCLIP13.01□□□□□ -0.33
HMGN1-213ENST00000482192 USP41Q3LFD5 358 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 GLRA4Q5JXX5 417 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 FOXD4L5Q5VV16 416 aaPredicted RBP13.01□□□□□ -0.33
HMGN1-213ENST00000482192 KIAA0319Q5VV43 1072 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 CES5AQ6NT32 575 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 TAS1R1Q7RTX1 841 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 GPR65Q8IYL9 337 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 FOXD4L4Q8WXT5 416 aaPredicted RBP13.01□□□□□ -0.33
HMGN1-213ENST00000482192 SUSD6Q92537 303 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 BICD1Q96G01 975 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 UROC1Q96N76 676 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 ACAP3Q96P50 834 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 PPP1R10Q96QC0 940 aaKnown RBP13.01□□□□□ -0.33
HMGN1-213ENST00000482192 GPR62Q9BZJ7 368 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 CHST7Q9NS84 486 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 SLC38A7Q9NVC3 462 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 TFIP11Q9UBB9 837 aaKnown RBP13.01□□□□□ -0.33
HMGN1-213ENST00000482192 CACNG4Q9UBN1 327 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 TBX20Q9UMR3 447 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 CUL9Q8IWT3 2517 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 A0A0C4DFX4 3053 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 TDRD15B5MCY1 1934 aaKnown RBP13□□□□□ -0.33
HMGN1-213ENST00000482192 SMIM28A0A1B0GU29 152 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 MATR3P43243 847 aaKnown RBP eCLIP13□□□□□ -0.33
HMGN1-213ENST00000482192 LIG4P49917 911 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 CLCN4P51793 760 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 MCL1Q07820 350 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 ELAVL2Q12926 359 aaKnown RBP13□□□□□ -0.33
HMGN1-213ENST00000482192 XKR4Q5GH76 650 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 ELMSAN1Q6PJG2 1045 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 ALKAL1Q6UXT8 129 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 SV2BQ7L1I2 683 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 SPRYD3Q8NCJ5 442 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 HASPINQ8TF76 798 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 ZBTB45Q96K62 511 aaPredicted RBP13□□□□□ -0.33
HMGN1-213ENST00000482192 B3GALT6Q96L58 329 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 SNX27Q96L92 541 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 APOL5Q9BWW9 433 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 PHF7Q9BWX1 381 aaPredicted RBP13□□□□□ -0.33
HMGN1-213ENST00000482192 C1QTNF1Q9BXJ1 281 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 ADAM7Q9H2U9 754 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 RXFP1Q9HBX9 757 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13□□□□□ -0.33
HMGN1-213ENST00000482192 BRWD1Q9NSI6 2320 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 MYO7AQ13402 2215 aa13□□□□□ -0.33
HMGN1-213ENST00000482192 TTC28Q96AY4 2481 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 SPDYE4A6NLX3 237 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 TMEM189-UBE2V1I3L0A0 370 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 TEX28O15482 410 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 PIGRP01833 764 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 KCNE1P15382 129 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 GTF2BQ00403 316 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 KYAT1Q16773 422 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 ATL3Q6DD88 541 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 DCLRE1AQ6PJP8 1040 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 DYMQ7RTS9 669 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 KCNG4Q8TDN1 519 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 RIN2Q8WYP3 895 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-213ENST00000482192 DDX12PQ92771 950 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 FBXL18Q96ME1 805 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 RIPOR3Q96MK2 946 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 NECTIN4Q96NY8 510 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 ST6GALNAC4Q9H4F1 302 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 SFXN1Q9H9B4 322 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 CNTN3Q9P232 1028 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 SEL1LQ9UBV2 794 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 DPP7Q9UHL4 492 aa12.99□□□□□ -0.33
HMGN1-213ENST00000482192 MYMKA6NI61 221 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 LOC730098B7Z3J9 87 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 PI4K2BG5E9Z4 385 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 CUTAO60888 179 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 B3GAT3O94766 335 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 GLUD1P00367 558 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 C1RP00736 705 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 CLTAP09496 248 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 ALADP13716 330 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 GAP43P17677 238 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 NMT1P30419 496 aaKnown RBP12.98□□□□□ -0.33
HMGN1-213ENST00000482192 CLCNKBP51801 687 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 PKP1Q13835 747 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 UPP1Q16831 310 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 SEZ6Q53EL9 994 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 RTP2Q5QGT7 225 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 RARS2Q5T160 578 aaKnown RBP12.98□□□□□ -0.33
HMGN1-213ENST00000482192 FAM171A1Q5VUB5 890 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 PDXDC1Q6P996 788 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 SFR1Q86XK3 245 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 MAP4K3Q8IVH8 894 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 PDILTQ8N807 584 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 KHSRPQ92945 711 aaKnown RBP eCLIP12.98□□□□□ -0.331e-7■■□□□ 13.3
HMGN1-213ENST00000482192 HVCN1Q96D96 273 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 DDX27Q96GQ7 796 aaKnown RBP12.98□□□□□ -0.33
HMGN1-213ENST00000482192 ZMAT2Q96NC0 199 aaKnown RBP12.98□□□□□ -0.33
HMGN1-213ENST00000482192 FIZ1Q96SL8 496 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 TTPALQ9BTX7 342 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms