RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 TTC38Q5R3I4 469 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 FUT10Q6P4F1 479 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 SLC27A1Q6PCB7 646 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 CDR2LQ86X02 465 aaPredicted RBP7.82□□□□□ -1.16
COL17A1-205ENST00000480127 CEP57Q86XR8 500 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 ZBTB44Q8NCP5 570 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 NELL1Q92832 810 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 BORCS6Q96GS4 357 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 SHDQ96IW2 340 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 ZFP42Q96MM3 310 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 CSRNP2Q9H175 543 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 SH2B1Q9NRF2 756 aaPredicted RBP7.82□□□□□ -1.16
COL17A1-205ENST00000480127 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.82□□□□□ -1.16
COL17A1-205ENST00000480127 SPATA6Q9NWH7 488 aaPredicted RBP7.82□□□□□ -1.16
COL17A1-205ENST00000480127 KLK14Q9P0G3 267 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 WRAP73Q9P2S5 460 aaPredicted RBP7.82□□□□□ -1.16
COL17A1-205ENST00000480127 FBXO4Q9UKT5 387 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 CDH7Q9ULB5 785 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 POLIQ9UNA4 740 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 GPR179Q6PRD1 2367 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 FAM170BA6NMN3 283 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 CCDC169A6NNP5 214 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 N4BP3O15049 544 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 SPTLC1O15269 473 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 LAMTOR5O43504 91 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 TSPAN1O60635 241 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 LILRB5O75023 590 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 PRKCBP05771 671 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 TGM1P22735 817 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 AKAP5P24588 427 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 RARRES1P49788 294 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 YARSP54577 528 aaKnown RBP7.81□□□□□ -1.16
COL17A1-205ENST00000480127 PRKCQQ04759 706 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 CSTF1Q05048 431 aaKnown RBP7.81□□□□□ -1.16
COL17A1-205ENST00000480127 MAPK8IP2Q13387 824 aaPredicted RBP7.81□□□□□ -1.16
COL17A1-205ENST00000480127 CAPSQ13938 189 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 MLF2Q15773 248 aaPredicted RBP7.81□□□□□ -1.16
COL17A1-205ENST00000480127 USP41Q3LFD5 358 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 SLC44A4Q53GD3 710 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 RTP2Q5QGT7 225 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 LIN9Q5TKA1 542 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 KRT79Q5XKE5 535 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 PADI6Q6TGC4 694 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 PRSS55Q6UWB4 352 aaPredicted RBP7.81□□□□□ -1.16
COL17A1-205ENST00000480127 GRASPQ7Z6J2 395 aaPredicted RBP7.81□□□□□ -1.16
COL17A1-205ENST00000480127 NOSTRINQ8IVI9 506 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 ASAP3Q8TDY4 903 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 RABGGTAQ92696 567 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 FGF13Q92913 245 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 LLPHQ9BRT6 129 aaKnown RBP7.81□□□□□ -1.16
COL17A1-205ENST00000480127 TCHPQ9BT92 498 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 BCO2Q9BYV7 579 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 OSBPL6Q9BZF3 934 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 NXF3Q9H4D5 531 aaKnown RBP7.81□□□□□ -1.16
COL17A1-205ENST00000480127 TUFT1Q9NNX1 390 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 PRMT7Q9NVM4 692 aaPredicted RBP7.81□□□□□ -1.16
COL17A1-205ENST00000480127 NCDNQ9UBB6 729 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 LRWD1Q9UFC0 647 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 FBXW11Q9UKB1 542 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 GDAQ9Y2T3 454 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 GIT1Q9Y2X7 761 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 PCDHGA2Q9Y5H1 932 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 STK24Q9Y6E0 443 aa7.81□□□□□ -1.16
COL17A1-205ENST00000480127 CACNA1IQ9P0X4 2223 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 SF3B1O75533 1304 aaKnown RBP eCLIP7.8□□□□□ -1.16
COL17A1-205ENST00000480127 EPG5Q9HCE0 2579 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 CASTOR2A6NHX0 329 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 SHISA7A6NL88 538 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 B4GALT5O43286 388 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 HARSP12081 509 aaKnown RBP7.8□□□□□ -1.16
COL17A1-205ENST00000480127 FDPSP14324 419 aaKnown RBP7.8□□□□□ -1.16
COL17A1-205ENST00000480127 ARF4P18085 180 aaPredicted RBP7.8□□□□□ -1.16
COL17A1-205ENST00000480127 CD72P21854 359 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 SDHBP21912 280 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 GLRA2P23416 452 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 MBTD1Q05BQ5 628 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 GRIK3Q13003 919 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 DMP1Q13316 513 aaPredicted RBP7.8□□□□□ -1.16
COL17A1-205ENST00000480127 FZD5Q13467 585 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 UBXN2BQ14CS0 331 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 AMHR2Q16671 573 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 TSSK4Q6SA08 328 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 RSPO2Q6UXX9 243 aaPredicted RBP7.8□□□□□ -1.16
COL17A1-205ENST00000480127 MTSS1LQ765P7 747 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 IFNLR1Q8IU57 520 aaPredicted RBP7.8□□□□□ -1.16
COL17A1-205ENST00000480127 GPR161Q8N6U8 529 aaKnown RBP7.8□□□□□ -1.16
COL17A1-205ENST00000480127 ITFG1Q8TB96 612 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 SNX29Q8TEQ0 813 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 HASPINQ8TF76 798 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 ATRIPQ8WXE1 791 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 KIFAP3Q92845 792 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 CLDN23Q96B33 292 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 BICD1Q96G01 975 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 PRIMPOLQ96LW4 560 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 HSD17B14Q9BPX1 270 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 CLSTN3Q9BQT9 956 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 PAAF1Q9BRP4 392 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 EPC1Q9H2F5 836 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 FOXP1Q9H334 677 aaPredicted RBP7.8□□□□□ -1.16
COL17A1-205ENST00000480127 LTB4R2Q9NPC1 389 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms