RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 GPR65Q8IYL9 337 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 CEP120Q8N960 986 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 LARP4BQ92615 738 aaKnown RBP15.13■□□□□ 0.01
HDAC7-222ENST00000477937 RAD54LQ92698 747 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 REEP2Q9BRK0 252 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 SFXN1Q9H9B4 322 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 RXFP1Q9HBX9 757 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 C11orf16Q9NQ32 467 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.13■□□□□ 0.01
HDAC7-222ENST00000477937 BLOC1S4Q9NUP1 217 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 CCDC39Q9UFE4 941 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 NR2E1Q9Y466 385 aa15.13■□□□□ 0.01
HDAC7-222ENST00000477937 VWA8A3KMH1 1905 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 FAM86C2PA6NEL3 165 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 TOM1L1O75674 476 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 FAM13AO94988 1023 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 KIF4AO95239 1232 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 TXLNAP40222 546 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 NCKAP1LP55160 1127 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 CREMQ03060 361 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 ELAVL2Q12926 359 aaKnown RBP15.12■□□□□ 0.01
HDAC7-222ENST00000477937 GLRA4Q5JXX5 417 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 SPECC1Q5M775 1068 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 KANK3Q6NY19 840 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 HAUS6Q7Z4H7 955 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 MYCT1Q8N699 235 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 LRRC15Q8TF66 581 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 HASPINQ8TF76 798 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 RIN2Q8WYP3 895 aaPredicted RBP15.12■□□□□ 0.01
HDAC7-222ENST00000477937 EPSTI1Q96J88 318 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 B3GALT6Q96L58 329 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 ACAP3Q96P50 834 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 PPP1R10Q96QC0 940 aaKnown RBP15.12■□□□□ 0.01
HDAC7-222ENST00000477937 POMKQ9H5K3 350 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 FNIP2Q9P278 1114 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 MUTYHQ9UIF7 546 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 CDH22Q9UJ99 828 aa15.12■□□□□ 0.01
HDAC7-222ENST00000477937 FBXO2Q9UK22 296 aaPredicted RBP15.12■□□□□ 0.01
HDAC7-222ENST00000477937 SMIM28A0A1B0GU29 152 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 ABLIM1O14639 778 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 CLDN3O15551 220 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 BRD1O95696 1058 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 GLUD1P00367 558 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 C1RP00736 705 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 WEE2P0C1S8 567 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 HARSP12081 509 aaKnown RBP15.11■□□□□ 0.01
HDAC7-222ENST00000477937 SCP2P22307 547 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 MATR3P43243 847 aaKnown RBP eCLIP15.11■□□□□ 0.01
HDAC7-222ENST00000477937 NOLC1Q14978 699 aaKnown RBP eCLIP15.11■□□□□ 0.01
HDAC7-222ENST00000477937 XKR4Q5GH76 650 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 FAM171A1Q5VUB5 890 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 ALKAL1Q6UXT8 129 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 TMC5Q6UXY8 1006 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 ZPBP2Q6X784 338 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 USP49Q70CQ1 688 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 HSCBQ8IWL3 235 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 BICD1Q96G01 975 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 ZBTB45Q96K62 511 aaPredicted RBP15.11■□□□□ 0.01
HDAC7-222ENST00000477937 UROC1Q96N76 676 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 CLIC6Q96NY7 704 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 TTPALQ9BTX7 342 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 ZHX3Q9H4I2 956 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 PARVGQ9HBI0 331 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 MAN1C1Q9NR34 630 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 TSHZ2Q9NRE2 1034 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 SLC38A7Q9NVC3 462 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 ANKFY1Q9P2R3 1169 aa15.11■□□□□ 0.01
HDAC7-222ENST00000477937 DENND4AQ7Z401 1863 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 PRR33A8MZF0 331 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 TMEM189-UBE2V1I3L0A0 370 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 TRAK2O60296 914 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 TBCAO75347 108 aaKnown RBP15.1■□□□□ 0.01
HDAC7-222ENST00000477937 B3GAT3O94766 335 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 HSP90AA1P07900 732 aaKnown RBP15.1■□□□□ 0.01
HDAC7-222ENST00000477937 PDIA4P13667 645 aaKnown RBP15.1■□□□□ 0.01
HDAC7-222ENST00000477937 SP100P23497 879 aaPredicted RBP15.1■□□□□ 0.01
HDAC7-222ENST00000477937 ZNF131P52739 623 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 SLC39A14Q15043 492 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 DCLRE1AQ6PJP8 1040 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 GPR149Q86SP6 731 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 CEP57Q86XR8 500 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 PALB2Q86YC2 1186 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 GLYCTKQ8IVS8 523 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 KRI1Q8N9T8 703 aaKnown RBP15.1■□□□□ 0.01
HDAC7-222ENST00000477937 HDAC7Q8WUI4 952 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 EDAQ92838 391 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 KCNN1Q92952 543 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 DDX27Q96GQ7 796 aaKnown RBP15.1■□□□□ 0.01
HDAC7-222ENST00000477937 USP28Q96RU2 1077 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 STK17AQ9UEE5 414 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 TBX20Q9UMR3 447 aa15.1■□□□□ 0.01
HDAC7-222ENST00000477937 MORC2Q9Y6X9 1032 aaPredicted RBP15.1■□□□□ 0.01
HDAC7-222ENST00000477937 K7ENM7 598 aa15.09■□□□□ 0.01
HDAC7-222ENST00000477937 TRAPPC3O43617 180 aa15.09■□□□□ 0.01
HDAC7-222ENST00000477937 RPL17P18621 184 aaKnown RBP15.09■□□□□ 0.01
HDAC7-222ENST00000477937 ABCD1P33897 745 aa15.09■□□□□ 0.01
HDAC7-222ENST00000477937 CLCNKBP51801 687 aa15.09■□□□□ 0.01
HDAC7-222ENST00000477937 MCL1Q07820 350 aa15.09■□□□□ 0.01
HDAC7-222ENST00000477937 UPP1Q16831 310 aa15.09■□□□□ 0.01
HDAC7-222ENST00000477937 RRAGBQ5VZM2 374 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms