RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 PPP1R10Q96QC0 940 aaKnown RBP12.26□□□□□ -0.45
CKS1B-206ENST00000474215 PARVGQ9HBI0 331 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 RXFP1Q9HBX9 757 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 DZANK1Q9NVP4 752 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 CACNG4Q9UBN1 327 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 SMIM28A0A1B0GU29 152 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 TEX28O15482 410 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 CLDN3O15551 220 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 FAM13AO94988 1023 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 ADH1AP07327 375 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 TXLNAP40222 546 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 NASPP49321 788 aaPredicted RBP12.25□□□□□ -0.45
CKS1B-206ENST00000474215 CLCN4P51793 760 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 XKR4Q5GH76 650 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 RRAGBQ5VZM2 374 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 RNF135Q8IUD6 432 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 C12orf76Q8N812 135 aaPredicted RBP12.25□□□□□ -0.45
CKS1B-206ENST00000474215 CEP120Q8N960 986 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 KRI1Q8N9T8 703 aaKnown RBP12.25□□□□□ -0.45
CKS1B-206ENST00000474215 KCNN1Q92952 543 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 B3GALT6Q96L58 329 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 FBXL18Q96ME1 805 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 ZNF396Q96N95 335 aaPredicted RBP12.25□□□□□ -0.45
CKS1B-206ENST00000474215 ACAP3Q96P50 834 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 ZHX3Q9H4I2 956 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 TFIP11Q9UBB9 837 aaKnown RBP12.25□□□□□ -0.45
CKS1B-206ENST00000474215 STK17AQ9UEE5 414 aa12.25□□□□□ -0.45
CKS1B-206ENST00000474215 SF3B1O75533 1304 aaKnown RBP eCLIP12.25□□□□□ -0.45
CKS1B-206ENST00000474215 DCXO43602 365 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 TRAK2O60296 914 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 TBCAO75347 108 aaKnown RBP12.24□□□□□ -0.45
CKS1B-206ENST00000474215 KIF4AO95239 1232 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 HARSP12081 509 aaKnown RBP12.24□□□□□ -0.45
CKS1B-206ENST00000474215 KCNE1P15382 129 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 MTHFRP42898 656 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 STK38Q15208 465 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 GLRA4Q5JXX5 417 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 ATAT1Q5SQI0 421 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 RARS2Q5T160 578 aaKnown RBP12.24□□□□□ -0.45
CKS1B-206ENST00000474215 KANK3Q6NY19 840 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 DCLRE1AQ6PJP8 1040 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 SV2BQ7L1I2 683 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 LINC00301Q8NCQ3 95 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 RIN2Q8WYP3 895 aaPredicted RBP12.24□□□□□ -0.45
CKS1B-206ENST00000474215 BICD1Q96G01 975 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 RPGRIP1Q96KN7 1286 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 RIPOR3Q96MK2 946 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 UROC1Q96N76 676 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 NECTIN4Q96NY8 510 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 PANK2Q9BZ23 570 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.24□□□□□ -0.45
CKS1B-206ENST00000474215 SLC38A7Q9NVC3 462 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 FNIP2Q9P278 1114 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 ANKFY1Q9P2R3 1169 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 DPP7Q9UHL4 492 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 TBX20Q9UMR3 447 aa12.24□□□□□ -0.45
CKS1B-206ENST00000474215 SPTLC2O15270 562 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 GPR37L1O60883 481 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 B3GAT3O94766 335 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 C1RP00736 705 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 ZSCAN22P10073 491 aaPredicted RBP12.23□□□□□ -0.45
CKS1B-206ENST00000474215 ABCD1P33897 745 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 CLCNKBP51801 687 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 CREMQ03060 361 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 MCL1Q07820 350 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 ELAVL2Q12926 359 aaKnown RBP12.23□□□□□ -0.45
CKS1B-206ENST00000474215 NOLC1Q14978 699 aaKnown RBP eCLIP12.23□□□□□ -0.453e-12■■■■□ 22
CKS1B-206ENST00000474215 SEZ6Q53EL9 994 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 TMEM31Q5JXX7 168 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 FAM171A1Q5VUB5 890 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 FOXD4L5Q5VV16 416 aaPredicted RBP12.23□□□□□ -0.45
CKS1B-206ENST00000474215 ELMSAN1Q6PJG2 1045 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 TMC5Q6UXY8 1006 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 CCDC73Q6ZRK6 1079 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 DYMQ7RTS9 669 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 HASPINQ8TF76 798 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 FOXD4L4Q8WXT5 416 aaPredicted RBP12.23□□□□□ -0.45
CKS1B-206ENST00000474215 DDX27Q96GQ7 796 aaKnown RBP12.23□□□□□ -0.45
CKS1B-206ENST00000474215 SNX27Q96L92 541 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 ZMAT2Q96NC0 199 aaKnown RBP12.23□□□□□ -0.45
CKS1B-206ENST00000474215 TTPALQ9BTX7 342 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 SFXN1Q9H9B4 322 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 CDH22Q9UJ99 828 aa12.23□□□□□ -0.45
CKS1B-206ENST00000474215 TDRD15B5MCY1 1934 aaKnown RBP12.22□□□□□ -0.45
CKS1B-206ENST00000474215 SPDYE4A6NLX3 237 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 TMEM189-UBE2V1I3L0A0 370 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 K7ENM7 598 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 HNRNPDLO14979 420 aaKnown RBP12.22□□□□□ -0.45
CKS1B-206ENST00000474215 MEFVO15553 781 aaPredicted RBP12.22□□□□□ -0.45
CKS1B-206ENST00000474215 TRAPPC3O43617 180 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 PPP6R2O75170 966 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 GLUD1P00367 558 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 PIGRP01833 764 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 CLTAP09496 248 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 WEE2P0C1S8 567 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 NMT1P30419 496 aaKnown RBP12.22□□□□□ -0.45
CKS1B-206ENST00000474215 MATR3P43243 847 aaKnown RBP eCLIP12.22□□□□□ -0.45
CKS1B-206ENST00000474215 LIG4P49917 911 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 GTF2BQ00403 316 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 SOX4Q06945 474 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms