RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 POU5F1Q01860 360 aaKnown RBP11.29□□□□□ -0.6
CASC3-204ENST00000474190 LRRC63Q05C16 580 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 DSC1Q08554 894 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 STX1AQ16623 288 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 CT47A1Q5JQC4 288 aaPredicted RBP11.29□□□□□ -0.6
CASC3-204ENST00000474190 ARMCX5Q6P1M9 558 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 GAS2L3Q86XJ1 694 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 ZNF280BQ86YH2 543 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 DHX40Q8IX18 779 aaKnown RBP11.29□□□□□ -0.6
CASC3-204ENST00000474190 TDHQ8IZJ6 230 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 GPD1LQ8N335 351 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 XXYLT1Q8NBI6 393 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 HELQQ8TDG4 1101 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 RNPC3Q96LT9 517 aaKnown RBP11.29□□□□□ -0.6
CASC3-204ENST00000474190 TCHPQ9BT92 498 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 CWH43Q9H720 699 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 GIT1Q9Y2X7 761 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 PTPRSQ13332 1948 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 MICAL3Q7RTP6 2002 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 ZBBXA8MT70 800 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 F8W810 466 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 MAPK13O15264 365 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 UPP2O95045 317 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 EFEMP2O95967 443 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 AMHP03971 560 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 NFICP08651 508 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 ACTN1P12814 892 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 ITGA4P13612 1032 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 ZNF18P17022 549 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 SCNN1GP51170 649 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 MARSP56192 900 aaKnown RBP11.28□□□□□ -0.6
CASC3-204ENST00000474190 SPAG1Q07617 926 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 CYP24A1Q07973 514 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 NCBP1Q09161 790 aaKnown RBP11.28□□□□□ -0.6
CASC3-204ENST00000474190 ADAM9Q13443 819 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 SNRNP35Q16560 246 aaKnown RBP11.28□□□□□ -0.6
CASC3-204ENST00000474190 ANO6Q4KMQ2 910 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 CDKAL1Q5VV42 579 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 FAM117BQ6P1L5 589 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 HS2ST1Q7LGA3 356 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 APTXQ7Z2E3 356 aaKnown RBP11.28□□□□□ -0.6
CASC3-204ENST00000474190 GOLGA5Q8TBA6 731 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 ENOX1Q8TC92 643 aaKnown RBP11.28□□□□□ -0.6
CASC3-204ENST00000474190 BCL7CQ8WUZ0 217 aaPredicted RBP11.28□□□□□ -0.6
CASC3-204ENST00000474190 SYAP1Q96A49 352 aaPredicted RBP11.28□□□□□ -0.6
CASC3-204ENST00000474190 C18orf25Q96B23 403 aaPredicted RBP11.28□□□□□ -0.6
CASC3-204ENST00000474190 ACAP3Q96P50 834 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 SLC9A7Q96T83 725 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 POP1Q99575 1024 aaKnown RBP11.28□□□□□ -0.6
CASC3-204ENST00000474190 BPIFA3Q9BQP9 254 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 ADPGKQ9BRR6 497 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 APOL6Q9BWW8 343 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 TMEM117Q9H0C3 514 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 RSAD1Q9HA92 442 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 PDE11AQ9HCR9 933 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 PRDM6Q9NQX0 595 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 TOPORSQ9NS56 1045 aaPredicted RBP11.28□□□□□ -0.6
CASC3-204ENST00000474190 SAMSN1Q9NSI8 373 aaKnown RBP11.28□□□□□ -0.6
CASC3-204ENST00000474190 TBC1D13Q9NVG8 400 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 ANO10Q9NW15 660 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 CACNG4Q9UBN1 327 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 PCDHB7Q9Y5E2 793 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 SLC4A7Q9Y6M7 1214 aa11.28□□□□□ -0.6
CASC3-204ENST00000474190 LRRIQ3A6PVS8 624 aaPredicted RBP11.27□□□□□ -0.61
CASC3-204ENST00000474190 PPEF2O14830 753 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 KIAA0391O15091 583 aaKnown RBP11.27□□□□□ -0.61
CASC3-204ENST00000474190 CALUO43852 315 aaPredicted RBP11.27□□□□□ -0.61
CASC3-204ENST00000474190 LETM1O95202 739 aaPredicted RBP11.27□□□□□ -0.61
CASC3-204ENST00000474190 KIF20AO95235 890 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 SKIP12755 728 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 PPP1R2P41236 205 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 GUCY2FP51841 1108 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 FKBP3Q00688 224 aaKnown RBP11.27□□□□□ -0.61
CASC3-204ENST00000474190 PSMD6Q15008 389 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 NOMO2Q5JPE7 1267 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 GLRA4Q5JXX5 417 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 JADE1Q6IE81 842 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 SASS6Q6UVJ0 657 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 C15orf39Q6ZRI6 1047 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 FILIP1Q7Z7B0 1213 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 TMEM173Q86WV6 379 aaPredicted RBP11.27□□□□□ -0.61
CASC3-204ENST00000474190 COLGALT2Q8IYK4 626 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 RDH13Q8NBN7 331 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 RNF169Q8NCN4 708 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 OR5B17Q8NGF7 314 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 PARD3BQ8TEW8 1205 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 GUCD1Q96NT3 240 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 PAAF1Q9BRP4 392 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 MKNK1Q9BUB5 465 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 PBX4Q9BYU1 374 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 NRDE2Q9H7Z3 1164 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 PLEKHA5Q9HAU0 1116 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 PARP2Q9UGN5 583 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 MRPL42Q9Y6G3 142 aaKnown RBP11.27□□□□□ -0.61
CASC3-204ENST00000474190 MYH11P35749 1972 aa11.27□□□□□ -0.61
CASC3-204ENST00000474190 TBKBP1A7MCY6 615 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 SLC16A3O15427 465 aaKnown RBP11.26□□□□□ -0.61
CASC3-204ENST00000474190 EXOC3O60645 756 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 LRRN2O75325 713 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 POMCP01189 267 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms