RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 ZPBP2Q6X784 338 aa24.7■■□□□ 1.54
PTP4A1-203ENST00000473334 HAUS6Q7Z4H7 955 aa24.7■■□□□ 1.54
PTP4A1-203ENST00000473334 PPP1R10Q96QC0 940 aaKnown RBP24.7■■□□□ 1.54
PTP4A1-203ENST00000473334 ADAM7Q9H2U9 754 aa24.7■■□□□ 1.54
PTP4A1-203ENST00000473334 PLXNA3P51805 1871 aa24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 LOC730098B7Z3J9 87 aa24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 TBCAO75347 108 aaKnown RBP24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 KIF4AO95239 1232 aa24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 ADH1AP07327 375 aa24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 HARSP12081 509 aaKnown RBP24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 PDIA4P13667 645 aaKnown RBP24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 SCP2P22307 547 aa24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 OSTNP61366 133 aa24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 NOLC1Q14978 699 aaKnown RBP eCLIP24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 GPR65Q8IYL9 337 aa24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 MYCT1Q8N699 235 aa24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 KRI1Q8N9T8 703 aaKnown RBP24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 HASPINQ8TF76 798 aa24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 ZBTB45Q96K62 511 aaPredicted RBP24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 FBXL18Q96ME1 805 aa24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 RXFP1Q9HBX9 757 aa24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 ANKFY1Q9P2R3 1169 aa24.69■■□□□ 1.54
PTP4A1-203ENST00000473334 K7ENM7 598 aa24.68■■□□□ 1.54
PTP4A1-203ENST00000473334 ALADP13716 330 aa24.68■■□□□ 1.54
PTP4A1-203ENST00000473334 STK38Q15208 465 aa24.68■■□□□ 1.54
PTP4A1-203ENST00000473334 XKR4Q5GH76 650 aa24.68■■□□□ 1.54
PTP4A1-203ENST00000473334 RARS2Q5T160 578 aaKnown RBP24.68■■□□□ 1.54
PTP4A1-203ENST00000473334 RRAGBQ5VZM2 374 aa24.68■■□□□ 1.54
PTP4A1-203ENST00000473334 ALKAL1Q6UXT8 129 aa24.68■■□□□ 1.54
PTP4A1-203ENST00000473334 BICD1Q96G01 975 aa24.68■■□□□ 1.54
PTP4A1-203ENST00000473334 B3GALT6Q96L58 329 aa24.68■■□□□ 1.54
PTP4A1-203ENST00000473334 SNX27Q96L92 541 aa24.68■■□□□ 1.54
PTP4A1-203ENST00000473334 ZNF396Q96N95 335 aaPredicted RBP24.68■■□□□ 1.54
PTP4A1-203ENST00000473334 ACAP3Q96P50 834 aa24.68■■□□□ 1.54
PTP4A1-203ENST00000473334 ZHX3Q9H4I2 956 aa24.68■■□□□ 1.54
PTP4A1-203ENST00000473334 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.68■■□□□ 1.54
PTP4A1-203ENST00000473334 SMIM28A0A1B0GU29 152 aa24.67■■□□□ 1.54
PTP4A1-203ENST00000473334 TEX28O15482 410 aa24.67■■□□□ 1.54
PTP4A1-203ENST00000473334 DCXO43602 365 aa24.67■■□□□ 1.54
PTP4A1-203ENST00000473334 TRAK2O60296 914 aa24.67■■□□□ 1.54
PTP4A1-203ENST00000473334 C12orf76Q8N812 135 aaPredicted RBP24.67■■□□□ 1.54
PTP4A1-203ENST00000473334 LINC00301Q8NCQ3 95 aa24.67■■□□□ 1.54
PTP4A1-203ENST00000473334 RPGRIP1Q96KN7 1286 aa24.67■■□□□ 1.54
PTP4A1-203ENST00000473334 UROC1Q96N76 676 aa24.67■■□□□ 1.54
PTP4A1-203ENST00000473334 NECTIN4Q96NY8 510 aa24.67■■□□□ 1.54
PTP4A1-203ENST00000473334 SFXN1Q9H9B4 322 aa24.67■■□□□ 1.54
PTP4A1-203ENST00000473334 TMEM189-UBE2V1I3L0A0 370 aa24.66■■□□□ 1.54
PTP4A1-203ENST00000473334 CLDN3O15551 220 aa24.66■■□□□ 1.54
PTP4A1-203ENST00000473334 MTHFRP42898 656 aa24.66■■□□□ 1.54
PTP4A1-203ENST00000473334 CREMQ03060 361 aa24.66■■□□□ 1.54
PTP4A1-203ENST00000473334 MCL1Q07820 350 aa24.66■■□□□ 1.54
PTP4A1-203ENST00000473334 ELAVL2Q12926 359 aaKnown RBP24.66■■□□□ 1.54
PTP4A1-203ENST00000473334 RNF135Q8IUD6 432 aa24.66■■□□□ 1.54
PTP4A1-203ENST00000473334 RIN2Q8WYP3 895 aaPredicted RBP24.66■■□□□ 1.54
PTP4A1-203ENST00000473334 RIPOR3Q96MK2 946 aa24.66■■□□□ 1.54
PTP4A1-203ENST00000473334 SLC38A7Q9NVC3 462 aa24.66■■□□□ 1.54
PTP4A1-203ENST00000473334 FNIP2Q9P278 1114 aa24.66■■□□□ 1.54
PTP4A1-203ENST00000473334 CDH22Q9UJ99 828 aa24.66■■□□□ 1.54
PTP4A1-203ENST00000473334 TBX20Q9UMR3 447 aa24.66■■□□□ 1.54
PTP4A1-203ENST00000473334 PDCD11Q14690 1871 aaKnown RBP24.66■■□□□ 1.54
PTP4A1-203ENST00000473334 SPDYE4A6NLX3 237 aa24.65■■□□□ 1.54
PTP4A1-203ENST00000473334 ABCD1P33897 745 aa24.65■■□□□ 1.54
PTP4A1-203ENST00000473334 MATR3P43243 847 aaKnown RBP eCLIP24.65■■□□□ 1.54
PTP4A1-203ENST00000473334 CCDC73Q6ZRK6 1079 aa24.65■■□□□ 1.54
PTP4A1-203ENST00000473334 FIZ1Q96SL8 496 aa24.65■■□□□ 1.54
PTP4A1-203ENST00000473334 CNTN3Q9P232 1028 aa24.65■■□□□ 1.54
PTP4A1-203ENST00000473334 HNRNPDLO14979 420 aaKnown RBP24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 SPTLC2O15270 562 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 GLUD1P00367 558 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 PIGRP01833 764 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 ZSCAN22P10073 491 aaPredicted RBP24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 KCNE1P15382 129 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 LIG4P49917 911 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 CLCNKBP51801 687 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 TMEM31Q5JXX7 168 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 RTP2Q5QGT7 225 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 FAM171A1Q5VUB5 890 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 FOXD4L5Q5VV16 416 aaPredicted RBP24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 KANK3Q6NY19 840 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 ELMSAN1Q6PJG2 1045 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 SV2BQ7L1I2 683 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 FOXD4L4Q8WXT5 416 aaPredicted RBP24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 ZMAT2Q96NC0 199 aaKnown RBP24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 TTPALQ9BTX7 342 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 POMKQ9H5K3 350 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 GOLGA2P5Q9HBQ8 144 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 MAN1C1Q9NR34 630 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 TFIP11Q9UBB9 837 aaKnown RBP24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 DPP7Q9UHL4 492 aa24.64■■□□□ 1.54
PTP4A1-203ENST00000473334 VWA8A3KMH1 1905 aa24.64■■□□□ 1.53
PTP4A1-203ENST00000473334 PPP6R2O75170 966 aa24.63■■□□□ 1.53
PTP4A1-203ENST00000473334 B3GAT3O94766 335 aa24.63■■□□□ 1.53
PTP4A1-203ENST00000473334 YEATS4O95619 227 aa24.63■■□□□ 1.53
PTP4A1-203ENST00000473334 WEE2P0C1S8 567 aa24.63■■□□□ 1.53
PTP4A1-203ENST00000473334 STAT6P42226 847 aa24.63■■□□□ 1.53
PTP4A1-203ENST00000473334 SOX4Q06945 474 aaPredicted RBP24.63■■□□□ 1.53
PTP4A1-203ENST00000473334 UPP1Q16831 310 aa24.63■■□□□ 1.53
PTP4A1-203ENST00000473334 SEZ6Q53EL9 994 aa24.63■■□□□ 1.53
PTP4A1-203ENST00000473334 HERC4Q5GLZ8 1057 aaPredicted RBP24.63■■□□□ 1.53
PTP4A1-203ENST00000473334 ATAT1Q5SQI0 421 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms