RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 PXNP49023 591 aaPredicted RBP11.46□□□□□ -0.57
CDHR3-209ENST00000472116 ADCY7P51828 1080 aa11.46□□□□□ -0.57
CDHR3-209ENST00000472116 NAPAP54920 295 aa11.46□□□□□ -0.57
CDHR3-209ENST00000472116 NCBP1Q09161 790 aaKnown RBP11.46□□□□□ -0.57
CDHR3-209ENST00000472116 DRP2Q13474 957 aa11.46□□□□□ -0.57
CDHR3-209ENST00000472116 KARSQ15046 597 aaKnown RBP11.46□□□□□ -0.57
CDHR3-209ENST00000472116 FAM78AQ5JUQ0 283 aa11.46□□□□□ -0.57
CDHR3-209ENST00000472116 RTP2Q5QGT7 225 aa11.46□□□□□ -0.57
CDHR3-209ENST00000472116 ZNF654Q8IZM8 581 aa11.46□□□□□ -0.57
CDHR3-209ENST00000472116 ABCA7Q8IZY2 2146 aa11.46□□□□□ -0.57
CDHR3-209ENST00000472116 PIK3R5Q8WYR1 880 aa11.46□□□□□ -0.57
CDHR3-209ENST00000472116 LRIG1Q96JA1 1093 aa11.46□□□□□ -0.57
CDHR3-209ENST00000472116 BBC3Q96PG8 261 aaPredicted RBP11.46□□□□□ -0.57
CDHR3-209ENST00000472116 CLSTN3Q9BQT9 956 aa11.46□□□□□ -0.57
CDHR3-209ENST00000472116 JPH2Q9BR39 696 aaPredicted RBP11.46□□□□□ -0.57
CDHR3-209ENST00000472116 TRIM6Q9C030 488 aaPredicted RBP11.46□□□□□ -0.57
CDHR3-209ENST00000472116 SENP2Q9HC62 589 aa11.46□□□□□ -0.57
CDHR3-209ENST00000472116 AVENQ9NQS1 362 aaPredicted RBP11.46□□□□□ -0.57
CDHR3-209ENST00000472116 PCDHB15Q9Y5E8 787 aa11.46□□□□□ -0.57
CDHR3-209ENST00000472116 URB1O60287 2271 aaKnown RBP11.46□□□□□ -0.58
CDHR3-209ENST00000472116 ATG13O75143 517 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 PLEKHA8P1O95397 391 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 FCARP24071 287 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 SIM1P81133 766 aaPredicted RBP11.45□□□□□ -0.58
CDHR3-209ENST00000472116 HNRNPUQ00839 825 aaKnown RBP eCLIP11.45□□□□□ -0.58
CDHR3-209ENST00000472116 ELAVL2Q12926 359 aaKnown RBP11.45□□□□□ -0.58
CDHR3-209ENST00000472116 SLC5A9Q2M3M2 681 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 PLK5Q496M5 336 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 ANKRD45Q5TZF3 282 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 FAM171A1Q5VUB5 890 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 VITQ6UXI7 678 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 NFXL1Q6ZNB6 911 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 PDZD4Q76G19 769 aaPredicted RBP11.45□□□□□ -0.58
CDHR3-209ENST00000472116 NCOA7Q8NI08 942 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 HNRNPLLQ8WVV9 542 aaKnown RBP11.45□□□□□ -0.58
CDHR3-209ENST00000472116 SMARCD2Q92925 531 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 E2F7Q96AV8 911 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 ASB16Q96NS5 453 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 GLT8D2Q9H1C3 349 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 CCDC86Q9H6F5 360 aaKnown RBP11.45□□□□□ -0.58
CDHR3-209ENST00000472116 RIC8AQ9NPQ8 531 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 DISC1Q9NRI5 854 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 IPPQ9Y573 584 aa11.45□□□□□ -0.58
CDHR3-209ENST00000472116 hCG_1642624A0A1W2PR95 340 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 BCLAF3A2AJT9 711 aaKnown RBP11.44□□□□□ -0.58
CDHR3-209ENST00000472116 SLC38A8A6NNN8 435 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 FAM86B1E9PN63 330 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 CCER2I3L3R5 266 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 ZNF862O60290 1169 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 FAM86B2P0C5J1 330 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 GBP1P32455 592 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 ELF1P32519 619 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 SCAPQ12770 1279 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 GRIK3Q13003 919 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 HSP90AA2PQ14568 343 aaPredicted RBP11.44□□□□□ -0.58
CDHR3-209ENST00000472116 CYP4A22Q5TCH4 519 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 HAUS6Q7Z4H7 955 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 SRGAP1Q7Z6B7 1085 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 RALGPS2Q86X27 583 aaPredicted RBP11.44□□□□□ -0.58
CDHR3-209ENST00000472116 CMTR1Q8N1G2 835 aaKnown RBP11.44□□□□□ -0.58
CDHR3-209ENST00000472116 ELMOD1Q8N336 334 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 SRBD1Q8N5C6 995 aaKnown RBP11.44□□□□□ -0.58
CDHR3-209ENST00000472116 ZFP42Q96MM3 310 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 CORO1BQ9BR76 489 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 CACNA2D2Q9NY47 1150 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 APC2O95996 2303 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 BPTFQ12830 3046 aa11.44□□□□□ -0.58
CDHR3-209ENST00000472116 SMG1Q96Q15 3661 aaKnown RBP11.43□□□□□ -0.58
CDHR3-209ENST00000472116 CCDC69A6NI79 296 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 SPECC1L-ADORA2AF8WAN1 911 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 PRRG1O14668 218 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 EXTL3O43909 919 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 CALM1P0DP23 149 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 CALM2P0DP24 149 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 CALM3P0DP25 149 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 SFNP31947 248 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 OR1D2P34982 312 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 JAK3P52333 1124 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 SPIRE1Q08AE8 756 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 LMAN2Q12907 356 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 RAB33AQ14088 237 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 XKR3Q5GH77 459 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 UBXN11Q5T124 520 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 PPP1R18Q6NYC8 613 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 KSR1Q8IVT5 923 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 MFSD6LQ8IWD5 586 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 CCDC82Q8N4S0 544 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 SMG8Q8ND04 991 aaKnown RBP11.43□□□□□ -0.58
CDHR3-209ENST00000472116 LNX1Q8TBB1 728 aaPredicted RBP11.43□□□□□ -0.58
CDHR3-209ENST00000472116 HASPINQ8TF76 798 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 CCDC51Q96ER9 411 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 SLITRK6Q9H5Y7 841 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 GIT1Q9Y2X7 761 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 COL4A3BPQ9Y5P4 624 aa11.43□□□□□ -0.58
CDHR3-209ENST00000472116 ZNF638Q14966 1978 aaKnown RBP11.42□□□□□ -0.58
CDHR3-209ENST00000472116 IGLV3-22A0A075B6J6 115 aa11.42□□□□□ -0.58
CDHR3-209ENST00000472116 SPAARA0A1B0GVQ0 90 aa11.42□□□□□ -0.58
CDHR3-209ENST00000472116 WDR27A2RRH5 827 aa11.42□□□□□ -0.58
CDHR3-209ENST00000472116 CHADO15335 359 aa11.42□□□□□ -0.58
CDHR3-209ENST00000472116 CHMP2AO43633 222 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms