RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 VIL1P09327 827 aaKnown RBP15.98■□□□□ 0.15
LIMS2-213ENST00000469300 TM4SF1P30408 202 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 NAMPTP43490 491 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 HEATR6Q6AI08 1181 aaKnown RBP15.98■□□□□ 0.15
LIMS2-213ENST00000469300 MMS22LQ6ZRQ5 1243 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 OPTNQ96CV9 577 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 FOXP2O15409 715 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 PFDN1O60925 122 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 HERVK_113P62684 666 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 NR1H3Q13133 447 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 SYTL5Q8TDW5 730 aaPredicted RBP15.98■□□□□ 0.15
LIMS2-213ENST00000469300 NT5C1AQ9BXI3 368 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 PARD6BQ9BYG5 372 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 NIF3L1Q9GZT8 377 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 HSD17B4P51659 736 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 PTPAQ15257 358 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.97■□□□□ 0.15
LIMS2-213ENST00000469300 GDAP1Q8TB36 358 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 HPS3Q969F9 1004 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 UBQLN1Q9UMX0 589 aaKnown RBP15.97■□□□□ 0.15
LIMS2-213ENST00000469300 HEY1Q9Y5J3 304 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 HGSO14964 777 aaPredicted RBP15.97■□□□□ 0.15
LIMS2-213ENST00000469300 EVI5O60447 810 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 KRT38O76015 456 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 CSPG5O95196 566 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 STAG3L1P0CL83 205 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 STX1BP61266 288 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 TRIP13Q15645 432 aaPredicted RBP15.97■□□□□ 0.15
LIMS2-213ENST00000469300 TAF1BQ53T94 588 aaPredicted RBP15.97■□□□□ 0.15
LIMS2-213ENST00000469300 C4orf19Q8IY42 314 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 PCSK1NQ9UHG2 260 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 TBX20Q9UMR3 447 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 USH1CQ9Y6N9 552 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 SMIM24O75264 130 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 HLA-DRAP01903 254 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 CCT5P48643 541 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 NLRP11P59045 1033 aaKnown RBP15.97■□□□□ 0.15
LIMS2-213ENST00000469300 SNX17Q15036 470 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 TMED2Q15363 201 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 METTL7BQ6UX53 244 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 RBBP8NLQ8NC74 664 aaPredicted RBP15.97■□□□□ 0.15
LIMS2-213ENST00000469300 RNF25Q96BH1 459 aaPredicted RBP15.97■□□□□ 0.15
LIMS2-213ENST00000469300 FSD1LQ9BXM9 530 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 PXMP2Q9NR77 195 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 SMYD2Q9NRG4 433 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 A0A1W2PQJ5 194 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 OGTO15294 1046 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 SLC37A4O43826 429 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 MAGEA9P43362 315 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 ZBTB17Q13105 803 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 SH3TC2Q8TF17 1288 aa15.97■□□□□ 0.15
LIMS2-213ENST00000469300 TARS2Q9BW92 718 aaKnown RBP15.97■□□□□ 0.15
LIMS2-213ENST00000469300 NPM3O75607 178 aaKnown RBP15.96■□□□□ 0.15
LIMS2-213ENST00000469300 LMBRD2Q68DH5 695 aaPredicted RBP15.96■□□□□ 0.15
LIMS2-213ENST00000469300 LRRC71Q8N4P6 559 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 DEPDC1BQ8WUY9 529 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 SCG3Q8WXD2 468 aaKnown RBP15.96■□□□□ 0.15
LIMS2-213ENST00000469300 OSBPL9Q96SU4 736 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 BFARQ9NZS9 450 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 CAMTA1Q9Y6Y1 1673 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 GPR182O15218 404 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 MAPRE1Q15691 268 aaKnown RBP15.96■□□□□ 0.15
LIMS2-213ENST00000469300 NTRK3Q16288 839 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 RASIP1Q5U651 963 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 PHLDB3Q6NSJ2 640 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 HEMGNQ9BXL5 484 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 DHX35Q9H5Z1 703 aaKnown RBP15.96■□□□□ 0.15
LIMS2-213ENST00000469300 AP3B1O00203 1094 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 FMR1Q06787 632 aaKnown RBP eCLIP15.96■□□□□ 0.15
LIMS2-213ENST00000469300 MYBPC2Q14324 1141 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 MUM1Q2TAK8 710 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 FBXO38Q6PIJ6 1188 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 ENGASEQ8NFI3 743 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 SYN2Q92777 582 aaPredicted RBP15.96■□□□□ 0.15
LIMS2-213ENST00000469300 IFT43Q96FT9 208 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 DDX27Q96GQ7 796 aaKnown RBP15.96■□□□□ 0.15
LIMS2-213ENST00000469300 NUF2Q9BZD4 464 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 FAM8A1Q9UBU6 413 aa15.96■□□□□ 0.15
LIMS2-213ENST00000469300 PPP1R12AO14974 1030 aaPredicted RBP15.96■□□□□ 0.14
LIMS2-213ENST00000469300 HOXA2O43364 376 aa15.96■□□□□ 0.14
LIMS2-213ENST00000469300 CREB3O43889 395 aa15.96■□□□□ 0.14
LIMS2-213ENST00000469300 KIF1CO43896 1103 aaKnown RBP15.96■□□□□ 0.14
LIMS2-213ENST00000469300 GARTP22102 1010 aa15.96■□□□□ 0.14
LIMS2-213ENST00000469300 NOP14P78316 857 aaKnown RBP15.96■□□□□ 0.14
LIMS2-213ENST00000469300 EPC1Q9H2F5 836 aa15.96■□□□□ 0.14
LIMS2-213ENST00000469300 GRB10Q13322 594 aa15.95■□□□□ 0.14
LIMS2-213ENST00000469300 NR1I3Q14994 352 aa15.95■□□□□ 0.14
LIMS2-213ENST00000469300 ZC2HC1CQ53FD0 456 aaPredicted RBP15.95■□□□□ 0.14
LIMS2-213ENST00000469300 KCNF1Q9H3M0 494 aa15.95■□□□□ 0.14
LIMS2-213ENST00000469300 HMGB1P1B2RPK0 211 aaPredicted RBP15.95■□□□□ 0.14
LIMS2-213ENST00000469300 KLHL38Q2WGJ6 581 aa15.95■□□□□ 0.14
LIMS2-213ENST00000469300 GANCQ8TET4 914 aa15.95■□□□□ 0.14
LIMS2-213ENST00000469300 AGPAT3Q9NRZ7 376 aa15.95■□□□□ 0.14
LIMS2-213ENST00000469300 TJP2Q9UDY2 1190 aa15.95■□□□□ 0.14
LIMS2-213ENST00000469300 LSM7Q9UK45 103 aaKnown RBP15.95■□□□□ 0.14
LIMS2-213ENST00000469300 SLC4A1P02730 911 aa15.95■□□□□ 0.14
LIMS2-213ENST00000469300 CDH6P55285 790 aa15.95■□□□□ 0.14
LIMS2-213ENST00000469300 INHBEP58166 350 aa15.95■□□□□ 0.14
LIMS2-213ENST00000469300 PIGHQ14442 188 aaPredicted RBP15.95■□□□□ 0.14
LIMS2-213ENST00000469300 LRRC23Q53EV4 343 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms