RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 TOP2AP11388 1531 aaKnown RBP4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 EIF4G1Q04637 1599 aaKnown RBP4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 PRRT4C9JH25 899 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 F8W8V4 182 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 M0R3H8 397 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 TBC1D4O60343 1298 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 LY86O95711 162 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 PYGLP06737 847 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 LTA4HP09960 611 aaKnown RBP4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 HNRNPLP14866 589 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 TSHRP16473 764 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 MAPKAPK2P49137 400 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 IL13RA1P78552 427 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 TARDBPQ13148 414 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 DDX10Q13206 875 aaKnown RBP4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 SNAPC2Q13487 334 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 PRKG1Q13976 671 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 UBE3CQ15386 1083 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 MSMPQ1L6U9 139 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 CR1LQ2VPA4 569 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 GJC2Q5T442 439 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 FBXO38Q6PIJ6 1188 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 LVRNQ6Q4G3 990 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 ABHD15Q6UXT9 468 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 PDZD4Q76G19 769 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 PCGF5Q86SE9 256 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 STK32CQ86UX6 486 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 SESTD1Q86VW0 696 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 MIB1Q86YT6 1006 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 STPG3Q8N7X2 389 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 ATP11CQ8NB49 1132 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 STON2Q8WXE9 905 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 SKA1Q96BD8 255 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 TBATAQ96M53 351 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 SAMD11Q96NU1 681 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 PPP1R16BQ96T49 567 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 PTPN18Q99952 460 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 PDCD2LQ9BRP1 358 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 TTLL2Q9BWV7 592 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 RNF32Q9H0A6 362 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 DLL4Q9NR61 685 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 GJB4Q9NTQ9 266 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 SAGE1Q9NXZ1 904 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 AFF4Q9UHB7 1163 aaKnown RBP4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 ZFP69BQ9UJL9 534 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 CROTQ9UKG9 612 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 CDC42EP3Q9UKI2 254 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 CC2D2AQ9P2K1 1620 aa4.41□□□□□ -1.7
HMGB1P25-201ENST00000468402 A0A0A6YYK5 440 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 H0Y858 1186 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 MYO1FO00160 1098 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 BIN1O00499 593 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 SEC24DO94855 1032 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 THP07101 528 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 NPR1P16066 1061 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 DDCP20711 480 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 EEF1GP26641 437 aaKnown RBP4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 DDIT3P35638 169 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 ALDH9A1P49189 494 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 ERVFRD-1P60508 538 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 MEF2AQ02078 507 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 TBX2Q13207 712 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 MPEG1Q2M385 716 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 PLEKHN1Q494U1 663 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 RSRC2Q7L4I2 434 aaKnown RBP4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 VSIG10LQ86VR7 867 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 PROSER1Q86XN7 944 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 CELF5Q8N6W0 485 aaKnown RBP4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 FBXO18Q8NFZ0 1043 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 OR6B3Q8NGW1 331 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 SNX33Q8WV41 574 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 SHISA4Q96DD7 197 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 IQCDQ96DY2 449 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 CYFIP2Q96F07 1278 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 ZSWIM3Q96MP5 696 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 CLIC6Q96NY7 704 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 TMEM209Q96SK2 561 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 P2RX7Q99572 595 aaKnown RBP4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 SOX7Q9BT81 388 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 FAM167BQ9BTA0 163 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 WDCPQ9H6R7 721 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 SERHLQ9NQF3 203 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 TLR9Q9NR96 1032 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 TMEM140Q9NV12 185 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 SPATA6Q9NWH7 488 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 HSPBP1Q9NZL4 362 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 CALCOCO1Q9P1Z2 691 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 ITGB1BP2Q9UKP3 347 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 SLC39A10Q9ULF5 831 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 RUVBL1Q9Y265 456 aaKnown RBP4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 GPR52Q9Y2T5 361 aa4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 LAS1LQ9Y4W2 734 aaKnown RBP4.4□□□□□ -1.71
HMGB1P25-201ENST00000468402 BAZ1BQ9UIG0 1483 aaKnown RBP4.39□□□□□ -1.71
HMGB1P25-201ENST00000468402 A0A1W2PR48 441 aa4.39□□□□□ -1.71
HMGB1P25-201ENST00000468402 DYTNA2CJ06 578 aa4.39□□□□□ -1.71
HMGB1P25-201ENST00000468402 OR14I1A6ND48 311 aa4.39□□□□□ -1.71
HMGB1P25-201ENST00000468402 RRN3P2A6NIE6 340 aa4.39□□□□□ -1.71
HMGB1P25-201ENST00000468402 THAP12O43422 761 aa4.39□□□□□ -1.71
HMGB1P25-201ENST00000468402 TMEM127O75204 238 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms