RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 TMEM161BQ8NDZ6 487 aa20.92■□□□□ 0.94
COL7A1-207ENST00000467985 RABGGTAQ92696 567 aa20.92■□□□□ 0.94
COL7A1-207ENST00000467985 MFSD14AQ96MC6 490 aa20.92■□□□□ 0.94
COL7A1-207ENST00000467985 PPP1R10Q96QC0 940 aaKnown RBP20.92■□□□□ 0.94
COL7A1-207ENST00000467985 TTPALQ9BTX7 342 aa20.92■□□□□ 0.94
COL7A1-207ENST00000467985 RHOBTB2Q9BYZ6 727 aa20.92■□□□□ 0.94
COL7A1-207ENST00000467985 PLEKHA4Q9H4M7 779 aa20.92■□□□□ 0.94
COL7A1-207ENST00000467985 TMEM189-UBE2V1I3L0A0 370 aa20.91■□□□□ 0.94
COL7A1-207ENST00000467985 TOM1L1O75674 476 aa20.91■□□□□ 0.94
COL7A1-207ENST00000467985 MAPTP10636 758 aaKnown RBP20.91■□□□□ 0.94
COL7A1-207ENST00000467985 PROZP22891 400 aa20.91■□□□□ 0.94
COL7A1-207ENST00000467985 SP100P23497 879 aaPredicted RBP20.91■□□□□ 0.94
COL7A1-207ENST00000467985 ARSHQ5FYA8 562 aa20.91■□□□□ 0.94
COL7A1-207ENST00000467985 XKR4Q5GH76 650 aa20.91■□□□□ 0.94
COL7A1-207ENST00000467985 KANK3Q6NY19 840 aa20.91■□□□□ 0.94
COL7A1-207ENST00000467985 MUC6Q6W4X9 2439 aa20.91■□□□□ 0.94
COL7A1-207ENST00000467985 ZPBP2Q6X784 338 aa20.91■□□□□ 0.94
COL7A1-207ENST00000467985 ZBTB33Q86T24 672 aa20.91■□□□□ 0.94
COL7A1-207ENST00000467985 ZDHHC14Q8IZN3 488 aa20.91■□□□□ 0.94
COL7A1-207ENST00000467985 TDRD5Q8NAT2 981 aaKnown RBP20.91■□□□□ 0.94
COL7A1-207ENST00000467985 B3GALT6Q96L58 329 aa20.91■□□□□ 0.94
COL7A1-207ENST00000467985 SLC38A7Q9NVC3 462 aa20.91■□□□□ 0.94
COL7A1-207ENST00000467985 TECTAO75443 2155 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 SMIM28A0A1B0GU29 152 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 C2CD4DB7Z1M9 353 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 SYT1P21579 422 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 SIGLEC14Q08ET2 396 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 RTP2Q5QGT7 225 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 FAM171A1Q5VUB5 890 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 DCLRE1AQ6PJP8 1040 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 ALKAL1Q6UXT8 129 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 CCDC149Q6ZUS6 474 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 HFE2Q6ZVN8 426 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 BMP8AQ7Z5Y6 402 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 GPBP1Q86WP2 473 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 HASPINQ8TF76 798 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 PIK3R5Q8WYR1 880 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 ACSF2Q96CM8 615 aaPredicted RBP20.9■□□□□ 0.94
COL7A1-207ENST00000467985 ACAP3Q96P50 834 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 CXCL16Q9H2A7 254 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 CACNG4Q9UBN1 327 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 PLXNA3P51805 1871 aa20.9■□□□□ 0.94
COL7A1-207ENST00000467985 TMEM221A6NGB7 291 aa20.89■□□□□ 0.93
COL7A1-207ENST00000467985 M0R296 226 aa20.89■□□□□ 0.93
COL7A1-207ENST00000467985 TRAPPC3O43617 180 aa20.89■□□□□ 0.93
COL7A1-207ENST00000467985 PLCG1P19174 1290 aa20.89■□□□□ 0.93
COL7A1-207ENST00000467985 ABCD1P33897 745 aa20.89■□□□□ 0.93
COL7A1-207ENST00000467985 NCKAP1LP55160 1127 aa20.89■□□□□ 0.93
COL7A1-207ENST00000467985 OSTNP61366 133 aa20.89■□□□□ 0.93
COL7A1-207ENST00000467985 GLRA4Q5JXX5 417 aa20.89■□□□□ 0.93
COL7A1-207ENST00000467985 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.89■□□□□ 0.93
COL7A1-207ENST00000467985 OTOP3Q7RTS5 596 aa20.89■□□□□ 0.93
COL7A1-207ENST00000467985 PALB2Q86YC2 1186 aa20.89■□□□□ 0.93
COL7A1-207ENST00000467985 RAD54LQ92698 747 aa20.89■□□□□ 0.93
COL7A1-207ENST00000467985 KCNN1Q92952 543 aa20.89■□□□□ 0.93
COL7A1-207ENST00000467985 DDX27Q96GQ7 796 aaKnown RBP20.89■□□□□ 0.93
COL7A1-207ENST00000467985 ZDHHC7Q9NXF8 308 aa20.89■□□□□ 0.93
COL7A1-207ENST00000467985 DENND4AQ7Z401 1863 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 NPHP3-ACAD11A0A0J9YXS1 232 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 CCDC195A0A1B0GUA6 201 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 K7ELQ4 463 aaPredicted RBP20.88■□□□□ 0.93
COL7A1-207ENST00000467985 ABLIM1O14639 778 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 CLDN3O15551 220 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 TGM5O43548 720 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 B3GAT3O94766 335 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 PAPLNO95428 1278 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 KRT18P05783 430 aaKnown RBP20.88■□□□□ 0.93
COL7A1-207ENST00000467985 KCNE1P15382 129 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 RESTQ13127 1097 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 NOLC1Q14978 699 aaKnown RBP eCLIP20.88■□□□□ 0.93
COL7A1-207ENST00000467985 KARSQ15046 597 aaKnown RBP20.88■□□□□ 0.93
COL7A1-207ENST00000467985 PSMD5Q16401 504 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 UPP1Q16831 310 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 LILRA6Q6PI73 481 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 CEP57Q86XR8 500 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 UBALD2Q8IYN6 164 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 CEP120Q8N960 986 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 FAM122AQ96E09 287 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 SNX27Q96L92 541 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 REEP2Q9BRK0 252 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 CCSER1Q9C0I3 900 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 PARVGQ9HBI0 331 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 BLOC1S4Q9NUP1 217 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 SORCS3Q9UPU3 1222 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 TRIP11Q15643 1979 aa20.88■□□□□ 0.93
COL7A1-207ENST00000467985 MTCL1Q9Y4B5 1905 aaKnown RBP20.88■□□□□ 0.93
COL7A1-207ENST00000467985 FAM13AO94988 1023 aa20.87■□□□□ 0.93
COL7A1-207ENST00000467985 PLA2G5P39877 138 aa20.87■□□□□ 0.93
COL7A1-207ENST00000467985 CLCNKBP51801 687 aa20.87■□□□□ 0.93
COL7A1-207ENST00000467985 ZNF131P52739 623 aa20.87■□□□□ 0.93
COL7A1-207ENST00000467985 GRIN1Q05586 938 aa20.87■□□□□ 0.93
COL7A1-207ENST00000467985 MTMR3Q13615 1198 aa20.87■□□□□ 0.93
COL7A1-207ENST00000467985 DHX8Q14562 1220 aaKnown RBP20.87■□□□□ 0.93
COL7A1-207ENST00000467985 PTPAQ15257 358 aa20.87■□□□□ 0.93
COL7A1-207ENST00000467985 PRSS55Q6UWB4 352 aaPredicted RBP20.87■□□□□ 0.93
COL7A1-207ENST00000467985 HAUS6Q7Z4H7 955 aa20.87■□□□□ 0.93
COL7A1-207ENST00000467985 MYCT1Q8N699 235 aa20.87■□□□□ 0.93
COL7A1-207ENST00000467985 KREMEN2Q8NCW0 462 aa20.87■□□□□ 0.93
COL7A1-207ENST00000467985 LNX1Q8TBB1 728 aaPredicted RBP20.87■□□□□ 0.93
COL7A1-207ENST00000467985 LARP4BQ92615 738 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms