RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 PAPLNO95428 1278 aa23.2■■□□□ 1.3
COL9A3-207ENST00000467819 NPR3P17342 541 aa23.2■■□□□ 1.3
COL9A3-207ENST00000467819 GLRA4Q5JXX5 417 aa23.2■■□□□ 1.3
COL9A3-207ENST00000467819 ATF7IP2Q5U623 682 aa23.2■■□□□ 1.3
COL9A3-207ENST00000467819 SNX29Q8TEQ0 813 aa23.2■■□□□ 1.3
COL9A3-207ENST00000467819 KIFAP3Q92845 792 aa23.2■■□□□ 1.3
COL9A3-207ENST00000467819 CLSTN3Q9BQT9 956 aa23.2■■□□□ 1.3
COL9A3-207ENST00000467819 DDX19AQ9NUU7 478 aaKnown RBP23.2■■□□□ 1.3
COL9A3-207ENST00000467819 FBXW11Q9UKB1 542 aa23.2■■□□□ 1.3
COL9A3-207ENST00000467819 CFAP54Q96N23 3096 aa23.19■■□□□ 1.3
COL9A3-207ENST00000467819 AOC1P19801 751 aa23.19■■□□□ 1.3
COL9A3-207ENST00000467819 EFNA5P52803 228 aa23.19■■□□□ 1.3
COL9A3-207ENST00000467819 NT5DC1Q5TFE4 455 aa23.19■■□□□ 1.3
COL9A3-207ENST00000467819 LNX1Q8TBB1 728 aaPredicted RBP23.19■■□□□ 1.3
COL9A3-207ENST00000467819 SH2B1Q9NRF2 756 aaPredicted RBP23.19■■□□□ 1.3
COL9A3-207ENST00000467819 VPS13AQ96RL7 3174 aa23.18■■□□□ 1.3
COL9A3-207ENST00000467819 RIF1Q5UIP0 2472 aaKnown RBP23.18■■□□□ 1.3
COL9A3-207ENST00000467819 STK25O00506 426 aa23.18■■□□□ 1.3
COL9A3-207ENST00000467819 ELAVL2Q12926 359 aaKnown RBP23.18■■□□□ 1.3
COL9A3-207ENST00000467819 PTGDRQ13258 359 aa23.18■■□□□ 1.3
COL9A3-207ENST00000467819 LIN9Q5TKA1 542 aa23.18■■□□□ 1.3
COL9A3-207ENST00000467819 SLC44A3Q8N4M1 653 aa23.18■■□□□ 1.3
COL9A3-207ENST00000467819 ST13P5Q8NFI4 369 aaPredicted RBP23.18■■□□□ 1.3
COL9A3-207ENST00000467819 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.18■■□□□ 1.3
COL9A3-207ENST00000467819 CA14Q9ULX7 337 aa23.18■■□□□ 1.3
COL9A3-207ENST00000467819 PCDHB6Q9Y5E3 794 aa23.18■■□□□ 1.3
COL9A3-207ENST00000467819 CCDC169A6NNP5 214 aa23.17■■□□□ 1.3
COL9A3-207ENST00000467819 K7ERI5 159 aa23.17■■□□□ 1.3
COL9A3-207ENST00000467819 ADAM12O43184 909 aa23.17■■□□□ 1.3
COL9A3-207ENST00000467819 LAMP2P13473 410 aa23.17■■□□□ 1.3
COL9A3-207ENST00000467819 RFX1P22670 979 aa23.17■■□□□ 1.3
COL9A3-207ENST00000467819 TOB1P50616 345 aaPredicted RBP23.17■■□□□ 1.3
COL9A3-207ENST00000467819 GRASPQ7Z6J2 395 aaPredicted RBP23.17■■□□□ 1.3
COL9A3-207ENST00000467819 RAB34Q9BZG1 259 aa23.17■■□□□ 1.3
COL9A3-207ENST00000467819 PTPRZ1P23471 2315 aaPredicted RBP23.17■■□□□ 1.3
COL9A3-207ENST00000467819 KRBA1A5PL33 1030 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 PP2D1A8MPX8 630 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 E9PMD0 336 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 C8AP07357 584 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 SRFP11831 508 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 FSHRP23945 695 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 IGFBP6P24592 240 aaPredicted RBP23.16■■□□□ 1.3
COL9A3-207ENST00000467819 U2AF2P26368 475 aaKnown RBP eCLIP23.16■■□□□ 1.3
COL9A3-207ENST00000467819 PEX3P56589 373 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 NTHL1P78549 312 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 PDIA5Q14554 519 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 PPM1LQ5SGD2 360 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.16■■□□□ 1.3
COL9A3-207ENST00000467819 APBB1IPQ7Z5R6 666 aaPredicted RBP23.16■■□□□ 1.3
COL9A3-207ENST00000467819 CEP120Q8N960 986 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 IGSF22Q8N9C0 903 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 NXPE3Q969Y0 559 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 PPP1R10Q96QC0 940 aaKnown RBP23.16■■□□□ 1.3
COL9A3-207ENST00000467819 KIF2CQ99661 725 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 RTP3Q9BQQ7 232 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 GOLGA2P5Q9HBQ8 144 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 WNT16Q9UBV4 365 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 POLIQ9UNA4 740 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 FAM186AA6NE01 2351 aa23.16■■□□□ 1.3
COL9A3-207ENST00000467819 PDCD11Q14690 1871 aaKnown RBP23.15■■□□□ 1.3
COL9A3-207ENST00000467819 PHLPP2Q6ZVD8 1323 aa23.15■■□□□ 1.3
COL9A3-207ENST00000467819 NOTCH4Q99466 2003 aa23.15■■□□□ 1.3
COL9A3-207ENST00000467819 PROB1E7EW31 1015 aa23.15■■□□□ 1.3
COL9A3-207ENST00000467819 CCL16O15467 120 aa23.15■■□□□ 1.3
COL9A3-207ENST00000467819 B3GAT3O94766 335 aa23.15■■□□□ 1.3
COL9A3-207ENST00000467819 CLCNKBP51801 687 aa23.15■■□□□ 1.3
COL9A3-207ENST00000467819 PDXDC1Q6P996 788 aa23.15■■□□□ 1.3
COL9A3-207ENST00000467819 ASCL5Q7RTU5 278 aa23.15■■□□□ 1.3
COL9A3-207ENST00000467819 CCDC105Q8IYK2 499 aa23.15■■□□□ 1.3
COL9A3-207ENST00000467819 TNFSF13BQ9Y275 285 aa23.15■■□□□ 1.3
COL9A3-207ENST00000467819 STK24Q9Y6E0 443 aa23.15■■□□□ 1.3
COL9A3-207ENST00000467819 TMEM189-UBE2V1I3L0A0 370 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 HIP1RO75146 1068 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 HNRNPA1P09651 372 aaKnown RBP eCLIP23.14■■□□□ 1.29
COL9A3-207ENST00000467819 CDC25AP30304 524 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 OR1D2P34982 312 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 NBL1P41271 181 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 NPTX2P47972 431 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 OSTNP61366 133 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 HTR4Q13639 388 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 ZNF568Q3ZCX4 644 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 KRT79Q5XKE5 535 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 FRMD5Q7Z6J6 570 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 DAW1Q8N136 415 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 DTWD2Q8NBA8 298 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 SLC7A14Q8TBB6 771 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 GPR152Q8TDT2 470 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 CDT1Q9H211 546 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 DNM3Q9UQ16 869 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 NUMBLQ9Y6R0 609 aa23.14■■□□□ 1.29
COL9A3-207ENST00000467819 ANHXE9PGG2 379 aa23.13■■□□□ 1.29
COL9A3-207ENST00000467819 I3L4J1 428 aa23.13■■□□□ 1.29
COL9A3-207ENST00000467819 FGFR3P22607 806 aa23.13■■□□□ 1.29
COL9A3-207ENST00000467819 DMP1Q13316 513 aaPredicted RBP23.13■■□□□ 1.29
COL9A3-207ENST00000467819 DCLRE1AQ6PJP8 1040 aa23.13■■□□□ 1.29
COL9A3-207ENST00000467819 UROC1Q96N76 676 aa23.13■■□□□ 1.29
COL9A3-207ENST00000467819 ACO2Q99798 780 aaKnown RBP23.13■■□□□ 1.29
COL9A3-207ENST00000467819 RUSC1Q9BVN2 902 aa23.13■■□□□ 1.29
COL9A3-207ENST00000467819 CCDC94Q9BW85 323 aaPredicted RBP23.13■■□□□ 1.29
COL9A3-207ENST00000467819 MTRRQ9UBK8 725 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms