RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	CDR2L	Q86X02	465 aa	Predicted RBP	13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	PPM1K	Q8N3J5	372 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	ZNF516	Q92618	1163 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	MTG1	Q9BT17	334 aa	Predicted RBP	13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	PDZD7	Q9H5P4	517 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	LUC7L	Q9NQ29	371 aa	Known RBP	13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.29	□□□□□ -0.28	3e-6	■■■□□ 15.8
HDLBP-231	ENST00000467435	C1orf112	Q9NSG2	853 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	MYO1A	Q9UBC5	1043 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	PDCD11	Q14690	1871 aa	Known RBP	13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435		A0A087X0T9	212 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	C17orf102	A2RUQ5	167 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	SEPT4	O43236	478 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	TSPAN1	O60635	241 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	CSDE1	O75534	798 aa	Known RBP	13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	TRPA1	O75762	1119 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	HLA-DRA	P01903	254 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	C4BPA	P04003	597 aa	Known RBP	13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	FAM228B	P0C875	321 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	RARB	P10826	455 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	MCF2	P10911	925 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	PRKAR2A	P13861	404 aa	Known RBP	13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	AP3M2	P53677	418 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	MFAP3	P55082	362 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	CACNB2	Q08289	660 aa	Predicted RBP	13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	TMEM62	Q0P6H9	643 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	HIC1	Q14526	733 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	SURF1	Q15526	300 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	WDR49	Q8IV35	697 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	THNSL1	Q8IYQ7	743 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	SLC35F6	Q8N357	371 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	CEP120	Q8N960	986 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	MYRIP	Q8NFW9	859 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	CD99L2	Q8TCZ2	262 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	HELQ	Q8TDG4	1101 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	KAT5	Q92993	513 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	CPB2	Q96IY4	423 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	KREMEN1	Q96MU8	473 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	LACRT	Q9GZZ8	138 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	SPC25	Q9HBM1	224 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	RNF186	Q9NXI6	227 aa		13.28	□□□□□ -0.28
HDLBP-231	ENST00000467435	UQCRHL	A0A096LP55	91 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	GPR25	O00155	361 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	PJA2	O43164	708 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	PGK1	P00558	417 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	UQCRH	P07919	91 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	ELN	P15502	786 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	ARF4	P18085	180 aa	Predicted RBP	13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	CCND3	P30281	292 aa	Predicted RBP	13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	MAP2K2	P36507	400 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	OSTN	P61366	133 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	ADAM17	P78536	824 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	CDC42EP1	Q00587	391 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	KIZ	Q2M2Z5	673 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	GNAS	Q5JWF2	1037 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	ENOSF1	Q7L5Y1	443 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	C7orf31	Q8N865	590 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	OR5B17	Q8NGF7	314 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	FAM212A	Q96EL1	285 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	FAM81B	Q96LP2	452 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	PI4K2A	Q9BTU6	479 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	ADAMTS10	Q9H324	1103 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	RPF1	Q9H9Y2	349 aa	Known RBP	13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	HDAC6	Q9UBN7	1215 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	SRRD	Q9UH36	339 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	ADAMTS1	Q9UHI8	967 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	ATP8B3	O60423	1300 aa		13.27	□□□□□ -0.29
HDLBP-231	ENST00000467435	MACROD2	A1Z1Q3	448 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	FOXN3	O00409	490 aa	Predicted RBP	13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	TREH	O43280	583 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	PHACTR2	O75167	634 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	ADAMTS4	O75173	837 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	GPR32	O75388	356 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	URI1	O94763	535 aa	Predicted RBP	13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	CLSTN1	O94985	981 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	IL18RAP	O95256	599 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	VNN1	O95497	513 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	HMGCR	P04035	888 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	CXCL8	P10145	99 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	GNAT1	P11488	350 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	HOXD10	P28358	340 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	HOXC8	P31273	242 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	USP8	P40818	1118 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	VEGFB	P49765	207 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	NKX3-2	P78367	333 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	GCNT1	Q02742	428 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	BMS1	Q14692	1282 aa	Known RBP	13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	WDR44	Q5JSH3	913 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	LNX1	Q8TBB1	728 aa	Predicted RBP	13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	DNAJB3	Q8WWF6	145 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	SHC3	Q92529	594 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	SECISBP2L	Q93073	1101 aa	Known RBP	13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	TATDN2	Q93075	761 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	ELMO3	Q96BJ8	720 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	OSMR	Q99650	979 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	ADPGK	Q9BRR6	497 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	MTMR12	Q9C0I1	747 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	XPNPEP3	Q9NQH7	507 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms