RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 LEFTY2O00292 366 aa5.66□□□□□ -1.5
SMC4-207ENST00000467263 KIAA0355O15063 1070 aa5.66□□□□□ -1.5
SMC4-207ENST00000467263 XPOTO43592 962 aaKnown RBP5.66□□□□□ -1.5
SMC4-207ENST00000467263 PHF2O75151 1096 aa5.66□□□□□ -1.5
SMC4-207ENST00000467263 GSPT1P15170 499 aaKnown RBP5.66□□□□□ -1.5
SMC4-207ENST00000467263 ZEB1P37275 1124 aaPredicted RBP5.66□□□□□ -1.5
SMC4-207ENST00000467263 MRPL49Q13405 166 aaKnown RBP5.66□□□□□ -1.5
SMC4-207ENST00000467263 NOMO1Q15155 1222 aa5.66□□□□□ -1.5
SMC4-207ENST00000467263 PCBP2Q15366 365 aaKnown RBP eCLIP5.66□□□□□ -1.5
SMC4-207ENST00000467263 Q6YL49 198 aa5.66□□□□□ -1.5
SMC4-207ENST00000467263 JADE3Q92613 823 aa5.66□□□□□ -1.5
SMC4-207ENST00000467263 ADI1Q9BV57 179 aa5.66□□□□□ -1.5
SMC4-207ENST00000467263 HOMER2Q9NSB8 354 aa5.66□□□□□ -1.5
SMC4-207ENST00000467263 RBM12Q9NTZ6 932 aaKnown RBP5.66□□□□□ -1.5
SMC4-207ENST00000467263 PTGFRNQ9P2B2 879 aa5.66□□□□□ -1.5
SMC4-207ENST00000467263 EIF2B4Q9UI10 523 aaKnown RBP5.66□□□□□ -1.5
SMC4-207ENST00000467263 DNM3Q9UQ16 869 aa5.66□□□□□ -1.5
SMC4-207ENST00000467263 NOP58Q9Y2X3 529 aaKnown RBP5.66□□□□□ -1.5
SMC4-207ENST00000467263 ZAR1LA6NP61 321 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 MASP2O00187 686 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 TRIM24O15164 1050 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 B3GALT2O43825 422 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 PCDHGA12O60330 932 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 RHOBTB3O94955 611 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 ECHS1P30084 290 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 PTPN7P35236 360 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 MCAMP43121 646 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 MRPS21P82921 87 aaKnown RBP5.65□□□□□ -1.5
SMC4-207ENST00000467263 VPS72Q15906 364 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 PTPN21Q16825 1174 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 PRAMEF14Q5SWL7 426 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 SYT12Q8IV01 421 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 CEP95Q96GE4 821 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 FUBP3Q96I24 572 aaKnown RBP eCLIP5.65□□□□□ -1.5
SMC4-207ENST00000467263 UHRF1Q96T88 793 aaPredicted RBP5.65□□□□□ -1.5
SMC4-207ENST00000467263 ASPSCR1Q9BZE9 553 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 WDR11Q9BZH6 1224 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 TOR3AQ9H497 397 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 SERHL2Q9H4I8 314 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 ZNF277Q9NRM2 450 aaPredicted RBP5.65□□□□□ -1.5
SMC4-207ENST00000467263 PCDHGA9Q9Y5G4 932 aaKnown RBP5.65□□□□□ -1.5
SMC4-207ENST00000467263 PCDHGA8Q9Y5G5 932 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 PCDHGA7Q9Y5G6 932 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 PCDHGA6Q9Y5G7 932 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 PCDHGA3Q9Y5H0 932 aa5.65□□□□□ -1.5
SMC4-207ENST00000467263 TNKSO95271 1327 aa5.65□□□□□ -1.51
SMC4-207ENST00000467263 POLR2AP24928 1970 aaKnown RBP5.64□□□□□ -1.51
SMC4-207ENST00000467263 hCG_2014768A0A024R1R8 64 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 SHTN1A0MZ66 631 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 NCR1O76036 304 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 GASTP01350 101 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 RBP3P10745 1247 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 ZNF37AP17032 561 aaPredicted RBP5.64□□□□□ -1.51
SMC4-207ENST00000467263 LAG3P18627 525 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 CRHR1P34998 444 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 PER3P56645 1201 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 C21orf58P58505 322 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 BRDTQ58F21 947 aaPredicted RBP5.64□□□□□ -1.51
SMC4-207ENST00000467263 COLEC12Q5KU26 742 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 ANKS6Q68DC2 871 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 FAM180AQ6UWF9 173 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 FAM83AQ86UY5 434 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 ADGRG3Q86Y34 549 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 DPF2Q92785 391 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 MYEOVQ96EZ4 313 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 FAM193BQ96PV7 902 aaPredicted RBP5.64□□□□□ -1.51
SMC4-207ENST00000467263 NDC1Q9BTX1 674 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 BRINP2Q9C0B6 783 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 R3HDMLQ9H3Y0 253 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 LDAHQ9H6V9 325 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 TUBD1Q9UJT1 453 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 HDAC5Q9UQL6 1122 aa5.64□□□□□ -1.51
SMC4-207ENST00000467263 KLHL33A6NCF5 533 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 FZD9O00144 591 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 WNT10BO00744 389 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 HSP90B1P14625 803 aaKnown RBP5.63□□□□□ -1.51
SMC4-207ENST00000467263 C5AR1P21730 350 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 PTH2RP49190 550 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 ANAPC15P60006 121 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 SEPT2Q15019 361 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 MFSD14BQ5SR56 506 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 PDZD4Q76G19 769 aaPredicted RBP5.63□□□□□ -1.51
SMC4-207ENST00000467263 PNMA8AQ86V59 439 aaPredicted RBP5.63□□□□□ -1.51
SMC4-207ENST00000467263 TRMT2AQ8IZ69 625 aaKnown RBP5.63□□□□□ -1.51
SMC4-207ENST00000467263 PQLC1Q8N2U9 271 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 OR7D4Q8NG98 312 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 OR2I1PQ8NGU4 316 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 NRG4Q8WWG1 115 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 HOXB13Q92826 284 aaPredicted RBP5.63□□□□□ -1.51
SMC4-207ENST00000467263 BCO1Q9HAY6 547 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 SPON1Q9HCB6 807 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 TRPM5Q9NZQ8 1165 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 INTUQ9ULD6 942 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 CHST2Q9Y4C5 530 aa5.63□□□□□ -1.51
SMC4-207ENST00000467263 TMEM200CA6NKL6 621 aa5.62□□□□□ -1.51
SMC4-207ENST00000467263 NDUFS2O75306 463 aa5.62□□□□□ -1.51
SMC4-207ENST00000467263 RECQL4O94761 1208 aa5.62□□□□□ -1.51
SMC4-207ENST00000467263 SREBF1P36956 1147 aa5.62□□□□□ -1.51
SMC4-207ENST00000467263 MGAT2Q10469 447 aa5.62□□□□□ -1.51
SMC4-207ENST00000467263 ODF1Q14990 250 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms