RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 LMBR1Q8WVP7 490 aa7.98□□□□□ -1.13
RPUSD3-212ENST00000466141 POF1BQ8WVV4 589 aa7.98□□□□□ -1.13
RPUSD3-212ENST00000466141 SUSD6Q92537 303 aa7.98□□□□□ -1.13
RPUSD3-212ENST00000466141 MIEF2Q96C03 454 aa7.98□□□□□ -1.13
RPUSD3-212ENST00000466141 GPRASP2Q96D09 838 aa7.98□□□□□ -1.13
RPUSD3-212ENST00000466141 ERP27Q96DN0 273 aa7.98□□□□□ -1.13
RPUSD3-212ENST00000466141 RIPOR3Q96MK2 946 aa7.98□□□□□ -1.13
RPUSD3-212ENST00000466141 SCLT1Q96NL6 688 aa7.98□□□□□ -1.13
RPUSD3-212ENST00000466141 PLVAPQ9BX97 442 aa7.98□□□□□ -1.13
RPUSD3-212ENST00000466141 EHMT1Q9H9B1 1298 aa7.98□□□□□ -1.13
RPUSD3-212ENST00000466141 SEPT10Q9P0V9 454 aa7.98□□□□□ -1.13
RPUSD3-212ENST00000466141 DKK3Q9UBP4 350 aa7.98□□□□□ -1.13
RPUSD3-212ENST00000466141 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.98□□□□□ -1.13
RPUSD3-212ENST00000466141 PLXNA4Q9HCM2 1894 aa7.98□□□□□ -1.13
RPUSD3-212ENST00000466141 EVPLQ92817 2033 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 IGLV3-22A0A075B6J6 115 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 TMEM238LA0A1B0GVL6 79 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 A0A1W2PRQ8 180 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 EDIL3O43854 480 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 KRT18P05783 430 aaKnown RBP7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 TRIM21P19474 475 aaKnown RBP7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 GNA11P29992 359 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 MNAT1P51948 309 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 CSE1LP55060 971 aaKnown RBP7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 RAPGEF1Q13905 1077 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 GNPTABQ3T906 1256 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 FAM26DQ5JW98 314 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 PPP1R15BQ5SWA1 713 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 CCDC122Q5T0U0 273 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 NAIF1Q69YI7 327 aaPredicted RBP7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 PPP4R4Q6NUP7 873 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 ZCCHC8Q6NZY4 707 aaKnown RBP7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 METTL7BQ6UX53 244 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 PACS1Q6VY07 963 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 CCDC186Q7Z3E2 898 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 CHPFQ8IZ52 775 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 KRT222Q8N1A0 295 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 KREMEN2Q8NCW0 462 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 PRR7Q8TB68 274 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 BICD2Q8TD16 824 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 N4BP2L2Q92802 583 aaPredicted RBP7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 P2RX5Q93086 422 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 NKD2Q969F2 451 aaPredicted RBP7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 PPP2R3CQ969Q6 453 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 THOC1Q96FV9 657 aaKnown RBP7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 FAXDC2Q96IV6 333 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 PHF20Q9BVI0 1012 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 TLE6Q9H808 572 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 MLXIPQ9HAP2 919 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 GRPEL1Q9HAV7 217 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 C6orf50Q9HD87 102 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 SH2B1Q9NRF2 756 aaPredicted RBP7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 GJB4Q9NTQ9 266 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 TBC1D7Q9P0N9 293 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 ORC3Q9UBD5 711 aaPredicted RBP7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 LIMCH1Q9UPQ0 1083 aa7.97□□□□□ -1.13
RPUSD3-212ENST00000466141 FAM86B1E9PN63 330 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 SGTAO43765 313 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 ATP9BO43861 1147 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 NEBLO76041 1014 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 CYP3A4P08684 503 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 FAM86B2P0C5J1 330 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 PECAM1P16284 738 aaPredicted RBP7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 ATF7P17544 494 aaPredicted RBP7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 CIITAP33076 1130 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 TSPAN7P41732 249 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 HNRNPH2P55795 449 aaKnown RBP7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 ADAM17P78536 824 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 FANCCQ00597 558 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 SP4Q02446 784 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 MGAT3Q09327 533 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 MTMR1Q13613 665 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 MYBPC3Q14896 1274 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 SYCP1Q15431 976 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 CEP55Q53EZ4 464 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 CCBE1Q6UXH8 406 aaPredicted RBP7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 NIPA1Q7RTP0 329 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 RTN4RL1Q86UN2 441 aaPredicted RBP7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 TXLNBQ8N3L3 684 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 ERMNQ8TAM6 284 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 CYP2W1Q8TAV3 490 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 ATP8B4Q8TF62 1192 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 TNFRSF25Q93038 417 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 LENG9Q96B70 501 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 RMDN1Q96DB5 314 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 TBC1D31Q96DN5 1066 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 NAF1Q96HR8 494 aaKnown RBP7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 NAP1L3Q99457 506 aaPredicted RBP7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 AGO3Q9H9G7 860 aaKnown RBP7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 RTEL1Q9NZ71 1219 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 HCSTQ9UBK5 93 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 DCTN4Q9UJW0 460 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 ITGB1BP2Q9UKP3 347 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 PCDHA4Q9UN74 947 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 SLC30A1Q9Y6M5 507 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 TTC3P53804 2025 aa7.96□□□□□ -1.14
RPUSD3-212ENST00000466141 VPS13AQ96RL7 3174 aa7.95□□□□□ -1.14
RPUSD3-212ENST00000466141 GOLGA6L10A0A0M3HER8 536 aa7.95□□□□□ -1.14
RPUSD3-212ENST00000466141 GTPBP10A4D1E9 387 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms