RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 KMT5AQ9NQR1 393 aa16.38■□□□□ 0.21
MRPL55-225ENST00000465268 FNIP2Q9P278 1114 aa16.38■□□□□ 0.21
MRPL55-225ENST00000465268 USTQ9Y2C2 406 aa16.38■□□□□ 0.21
MRPL55-225ENST00000465268 PHLPP2Q6ZVD8 1323 aa16.38■□□□□ 0.21
MRPL55-225ENST00000465268 PLA2G4BP0C869 781 aa16.37■□□□□ 0.21
MRPL55-225ENST00000465268 PROZP22891 400 aa16.37■□□□□ 0.21
MRPL55-225ENST00000465268 HOXD11P31277 338 aaPredicted RBP16.37■□□□□ 0.21
MRPL55-225ENST00000465268 MCM2P49736 904 aa16.37■□□□□ 0.21
MRPL55-225ENST00000465268 CLCNKBP51801 687 aa16.37■□□□□ 0.21
MRPL55-225ENST00000465268 DMP1Q13316 513 aaPredicted RBP16.37■□□□□ 0.21
MRPL55-225ENST00000465268 CUL4AQ13619 759 aa16.37■□□□□ 0.21
MRPL55-225ENST00000465268 SEZ6Q53EL9 994 aa16.37■□□□□ 0.21
MRPL55-225ENST00000465268 XKR4Q5GH76 650 aa16.37■□□□□ 0.21
MRPL55-225ENST00000465268 RSPO2Q6UXX9 243 aaPredicted RBP16.37■□□□□ 0.21
MRPL55-225ENST00000465268 C15orf39Q6ZRI6 1047 aa16.37■□□□□ 0.21
MRPL55-225ENST00000465268 CCDC149Q6ZUS6 474 aa16.37■□□□□ 0.21
MRPL55-225ENST00000465268 CEP57Q86XR8 500 aa16.37■□□□□ 0.21
MRPL55-225ENST00000465268 TMEM161BQ8NDZ6 487 aa16.37■□□□□ 0.21
MRPL55-225ENST00000465268 NTPCRQ9BSD7 190 aaKnown RBP16.37■□□□□ 0.21
MRPL55-225ENST00000465268 SORCS3Q9UPU3 1222 aa16.37■□□□□ 0.21
MRPL55-225ENST00000465268 SF3B1O75533 1304 aaKnown RBP eCLIP16.37■□□□□ 0.21
MRPL55-225ENST00000465268 MUC6Q6W4X9 2439 aa16.36■□□□□ 0.21
MRPL55-225ENST00000465268 SMIM28A0A1B0GU29 152 aa16.36■□□□□ 0.21
MRPL55-225ENST00000465268 I3L4J1 428 aa16.36■□□□□ 0.21
MRPL55-225ENST00000465268 PAPLNO95428 1278 aa16.36■□□□□ 0.21
MRPL55-225ENST00000465268 GRM5P41594 1212 aa16.36■□□□□ 0.21
MRPL55-225ENST00000465268 NHLH1Q02575 133 aa16.36■□□□□ 0.21
MRPL55-225ENST00000465268 ZNF568Q3ZCX4 644 aa16.36■□□□□ 0.21
MRPL55-225ENST00000465268 ARL6IP4Q66PJ3 421 aaKnown RBP16.36■□□□□ 0.21
MRPL55-225ENST00000465268 FBXL6Q8N531 539 aa16.36■□□□□ 0.21
MRPL55-225ENST00000465268 PIK3R5Q8WYR1 880 aa16.36■□□□□ 0.21
MRPL55-225ENST00000465268 DRC1Q96MC2 740 aa16.36■□□□□ 0.21
MRPL55-225ENST00000465268 MYADMQ96S97 322 aa16.36■□□□□ 0.21
MRPL55-225ENST00000465268 TTPALQ9BTX7 342 aa16.36■□□□□ 0.21
MRPL55-225ENST00000465268 MRPL4Q9BYD3 311 aaKnown RBP16.36■□□□□ 0.21
MRPL55-225ENST00000465268 HAPLN2Q9GZV7 340 aa16.36■□□□□ 0.21
MRPL55-225ENST00000465268 NT5C3AQ9H0P0 336 aa16.36■□□□□ 0.21
MRPL55-225ENST00000465268 WDR6Q9NNW5 1121 aaKnown RBP16.36■□□□□ 0.21
MRPL55-225ENST00000465268 MAPTP10636 758 aaKnown RBP16.35■□□□□ 0.21
MRPL55-225ENST00000465268 HARSP12081 509 aaKnown RBP16.35■□□□□ 0.21
MRPL55-225ENST00000465268 PLS3P13797 630 aa16.35■□□□□ 0.21
MRPL55-225ENST00000465268 BRCC3P46736 316 aa16.35■□□□□ 0.21
MRPL55-225ENST00000465268 MTMR3Q13615 1198 aa16.35■□□□□ 0.21
MRPL55-225ENST00000465268 UPP1Q16831 310 aa16.35■□□□□ 0.21
MRPL55-225ENST00000465268 GPR65Q8IYL9 337 aa16.35■□□□□ 0.21
MRPL55-225ENST00000465268 ST13P5Q8NFI4 369 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-225ENST00000465268 SPIRE2Q8WWL2 714 aa16.35■□□□□ 0.21
MRPL55-225ENST00000465268 RSAD2Q8WXG1 361 aa16.35■□□□□ 0.21
MRPL55-225ENST00000465268 SMG7Q92540 1137 aaKnown RBP16.35■□□□□ 0.21
MRPL55-225ENST00000465268 PHOX2BQ99453 314 aa16.35■□□□□ 0.21
MRPL55-225ENST00000465268 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.35■□□□□ 0.21
MRPL55-225ENST00000465268 BLOC1S4Q9NUP1 217 aa16.35■□□□□ 0.21
MRPL55-225ENST00000465268 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-225ENST00000465268 B3GAT3O94766 335 aa16.34■□□□□ 0.21
MRPL55-225ENST00000465268 FGFR3P22607 806 aa16.34■□□□□ 0.21
MRPL55-225ENST00000465268 TKTP29401 623 aaKnown RBP16.34■□□□□ 0.21
MRPL55-225ENST00000465268 SF3A1Q15459 793 aaKnown RBP16.34■□□□□ 0.21
MRPL55-225ENST00000465268 PSMD5Q16401 504 aa16.34■□□□□ 0.21
MRPL55-225ENST00000465268 MPZL3Q6UWV2 235 aa16.34■□□□□ 0.21
MRPL55-225ENST00000465268 PLCD3Q8N3E9 789 aa16.34■□□□□ 0.21
MRPL55-225ENST00000465268 C18orf25Q96B23 403 aaPredicted RBP16.34■□□□□ 0.21
MRPL55-225ENST00000465268 SNX27Q96L92 541 aa16.34■□□□□ 0.21
MRPL55-225ENST00000465268 PLEKHA4Q9H4M7 779 aa16.34■□□□□ 0.21
MRPL55-225ENST00000465268 C17orf75Q9HAS0 396 aa16.34■□□□□ 0.21
MRPL55-225ENST00000465268 FBXW11Q9UKB1 542 aa16.34■□□□□ 0.21
MRPL55-225ENST00000465268 RBM19Q9Y4C8 960 aaKnown RBP16.34■□□□□ 0.21
MRPL55-225ENST00000465268 CLIC4Q9Y696 253 aa16.34■□□□□ 0.21
MRPL55-225ENST00000465268 TMEM189-UBE2V1I3L0A0 370 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 NARSO43776 548 aaKnown RBP16.33■□□□□ 0.2
MRPL55-225ENST00000465268 MCF2P10911 925 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 AVPR2P30518 371 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 NTHL1P78549 312 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 TCF15Q12870 199 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 DHX8Q14562 1220 aaKnown RBP16.33■□□□□ 0.2
MRPL55-225ENST00000465268 MCM6Q14566 821 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 KARSQ15046 597 aaKnown RBP16.33■□□□□ 0.2
MRPL55-225ENST00000465268 SLC10A6Q3KNW5 377 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 SPECC1Q5M775 1068 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 FAM173BQ6P4H8 233 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 DCLRE1AQ6PJP8 1040 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 USP49Q70CQ1 688 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 OTOP3Q7RTS5 596 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 SUGP1Q8IWZ8 645 aaKnown RBP16.33■□□□□ 0.2
MRPL55-225ENST00000465268 UBALD2Q8IYN6 164 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 HDAC7Q8WUI4 952 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 REEP2Q9BRK0 252 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 TCHPQ9BT92 498 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 TIPINQ9BVW5 301 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 CCDC94Q9BW85 323 aaPredicted RBP16.33■□□□□ 0.2
MRPL55-225ENST00000465268 RHOBTB2Q9BYZ6 727 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 PRKD2Q9BZL6 878 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 KCNK12Q9HB15 430 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 CLUHO75153 1309 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 ZNF318Q5VUA4 2279 aa16.33■□□□□ 0.2
MRPL55-225ENST00000465268 VPS37CA5D8V6 355 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-225ENST00000465268 ZMYND10O75800 440 aa16.32■□□□□ 0.2
MRPL55-225ENST00000465268 C1RP00736 705 aa16.32■□□□□ 0.2
MRPL55-225ENST00000465268 KCNE1P15382 129 aa16.32■□□□□ 0.2
MRPL55-225ENST00000465268 PLCG1P19174 1290 aa16.32■□□□□ 0.2
MRPL55-225ENST00000465268 PLXNA3P51805 1871 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms