RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 CASC1Q6TDU7 716 aa6.65□□□□□ -1.34
SSBP1-204ENST00000465167 NFXL1Q6ZNB6 911 aa6.65□□□□□ -1.34
SSBP1-204ENST00000465167 SESTD1Q86VW0 696 aa6.65□□□□□ -1.34
SSBP1-204ENST00000465167 HERC6Q8IVU3 1022 aa6.65□□□□□ -1.34
SSBP1-204ENST00000465167 CTCFLQ8NI51 663 aaPredicted RBP6.65□□□□□ -1.34
SSBP1-204ENST00000465167 SMARCC2Q8TAQ2 1214 aa6.65□□□□□ -1.34
SSBP1-204ENST00000465167 ARNTL2Q8WYA1 636 aa6.65□□□□□ -1.34
SSBP1-204ENST00000465167 MRFAP1L1Q96HT8 127 aa6.65□□□□□ -1.34
SSBP1-204ENST00000465167 CCDC74BQ96LY2 380 aa6.65□□□□□ -1.34
SSBP1-204ENST00000465167 DEPDC7Q96QD5 511 aa6.65□□□□□ -1.34
SSBP1-204ENST00000465167 SRPK1Q96SB4 655 aaKnown RBP6.65□□□□□ -1.34
SSBP1-204ENST00000465167 KIF2CQ99661 725 aa6.65□□□□□ -1.34
SSBP1-204ENST00000465167 FOXQ1Q9C009 403 aa6.65□□□□□ -1.34
SSBP1-204ENST00000465167 CCDC113Q9H0I3 377 aa6.65□□□□□ -1.34
SSBP1-204ENST00000465167 JMJD4Q9H9V9 463 aa6.65□□□□□ -1.34
SSBP1-204ENST00000465167 SNTG2Q9NY99 539 aa6.65□□□□□ -1.34
SSBP1-204ENST00000465167 GTF2IRD1Q9UHL9 959 aa6.65□□□□□ -1.34
SSBP1-204ENST00000465167 ZNF215Q9UL58 517 aaPredicted RBP6.65□□□□□ -1.34
SSBP1-204ENST00000465167 COL4A4P53420 1690 aaPredicted RBP6.65□□□□□ -1.35
SSBP1-204ENST00000465167 TLDC2A0PJX2 215 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 C17orf102A2RUQ5 167 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 FAM221BA6H8Z2 402 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 RGS13O14921 159 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 PPFIA4O75335 1185 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 LRIG2O94898 1065 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 GGPS1O95749 300 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 F2P00734 622 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 IGHDP01880 384 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 AMHP03971 560 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 CKBP12277 381 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 XRCC6P12956 609 aaKnown RBP eCLIP6.64□□□□□ -1.35
SSBP1-204ENST00000465167 MSNP26038 577 aaKnown RBP6.64□□□□□ -1.35
SSBP1-204ENST00000465167 POLR2BP30876 1174 aaKnown RBP6.64□□□□□ -1.35
SSBP1-204ENST00000465167 GNAQP50148 359 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 HSD17B4P51659 736 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 NEDD9Q14511 834 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 GRM4Q14833 912 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 PGM5Q15124 567 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 UVSSAQ2YD98 709 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 CELF3Q5SZQ8 465 aaKnown RBP6.64□□□□□ -1.35
SSBP1-204ENST00000465167 TTC22Q5TAA0 569 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 PHACTR4Q8IZ21 702 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 PPP1R13LQ8WUF5 828 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 FBLIM1Q8WUP2 373 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 EZH1Q92800 747 aaPredicted RBP6.64□□□□□ -1.35
SSBP1-204ENST00000465167 RRP36Q96EU6 259 aaKnown RBP6.64□□□□□ -1.35
SSBP1-204ENST00000465167 DPH2Q9BQC3 489 aaPredicted RBP6.64□□□□□ -1.35
SSBP1-204ENST00000465167 PDCD2LQ9BRP1 358 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 SEMA6CQ9H3T2 930 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 CERS4Q9HA82 394 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 GRPEL1Q9HAV7 217 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 CHMP5Q9NZZ3 219 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 HDAC6Q9UBN7 1215 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 COG5Q9UP83 839 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 MAPK8IP1Q9UQF2 711 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 SIP14410 1827 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 KAT6AQ92794 2004 aa6.64□□□□□ -1.35
SSBP1-204ENST00000465167 FAM86C2PA6NEL3 165 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 CCDC69A6NI79 296 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 UBOX5O94941 541 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 GJB6O95452 261 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 NFICP08651 508 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 RAB6AP20340 208 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 HOXA13P31271 388 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-204ENST00000465167 THPOP40225 353 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 WDR5P61964 334 aaKnown RBP6.63□□□□□ -1.35
SSBP1-204ENST00000465167 RBM10P98175 930 aaKnown RBP6.63□□□□□ -1.35
SSBP1-204ENST00000465167 SGO2Q562F6 1265 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 SYNE3Q6ZMZ3 975 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 CYB5R4Q7L1T6 521 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 ARMCX6Q7L4S7 300 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 RSPH3Q86UC2 560 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 NLRX1Q86UT6 975 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 ZSCAN30Q86W11 494 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 ARMC10Q8N2F6 343 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 TMTC2Q8N394 836 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 MFSD2AQ8NA29 543 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 GIMAP8Q8ND71 665 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-204ENST00000465167 BAHD1Q8TBE0 780 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-204ENST00000465167 CYB5D2Q8WUJ1 264 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 PIBF1Q8WXW3 757 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 SEPT8Q92599 483 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 TBC1D5Q92609 795 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 ATP6V0A1Q93050 837 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 MEGF10Q96KG7 1140 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 MYRFLQ96LU7 910 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 GBP4Q96PP9 640 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 PSMG3-AS1Q96PY0 264 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 TGS1Q96RS0 853 aaKnown RBP6.63□□□□□ -1.35
SSBP1-204ENST00000465167 LZTS2Q9BRK4 669 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 YIPF2Q9BWQ6 316 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 COL20A1Q9P218 1284 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 MAD2L2Q9UI95 211 aa6.63□□□□□ -1.35
SSBP1-204ENST00000465167 RANBP2P49792 3224 aaKnown RBP6.63□□□□□ -1.35
SSBP1-204ENST00000465167 SZT2Q5T011 3432 aa6.62□□□□□ -1.35
SSBP1-204ENST00000465167 B2RBV5 119 aa6.62□□□□□ -1.35
SSBP1-204ENST00000465167 RSPH10B2B2RC85 870 aa6.62□□□□□ -1.35
SSBP1-204ENST00000465167 DYNC1I1O14576 645 aa6.62□□□□□ -1.35
SSBP1-204ENST00000465167 FIBPO43427 364 aa6.62□□□□□ -1.35
SSBP1-204ENST00000465167 CAND2O75155 1236 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms