RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 CATSPER3Q86XQ3 398 aa25.61■■□□□ 1.69
SSNA1-203ENST00000463511 CEP57Q86XR8 500 aa25.61■■□□□ 1.69
SSNA1-203ENST00000463511 TTPALQ9BTX7 342 aa25.61■■□□□ 1.69
SSNA1-203ENST00000463511 CXCL16Q9H2A7 254 aa25.61■■□□□ 1.69
SSNA1-203ENST00000463511 FZD8Q9H461 694 aa25.61■■□□□ 1.69
SSNA1-203ENST00000463511 SNTG2Q9NY99 539 aa25.61■■□□□ 1.69
SSNA1-203ENST00000463511 FBXW11Q9UKB1 542 aa25.61■■□□□ 1.69
SSNA1-203ENST00000463511 COL4A3Q01955 1670 aa25.61■■□□□ 1.69
SSNA1-203ENST00000463511 ANHXE9PGG2 379 aa25.6■■□□□ 1.69
SSNA1-203ENST00000463511 N4BP3O15049 544 aa25.6■■□□□ 1.69
SSNA1-203ENST00000463511 MED24O75448 989 aa25.6■■□□□ 1.69
SSNA1-203ENST00000463511 RECQL4O94761 1208 aa25.6■■□□□ 1.69
SSNA1-203ENST00000463511 FSHRP23945 695 aa25.6■■□□□ 1.69
SSNA1-203ENST00000463511 MCM7P33993 719 aa25.6■■□□□ 1.69
SSNA1-203ENST00000463511 PSMD5Q16401 504 aa25.6■■□□□ 1.69
SSNA1-203ENST00000463511 FAM187BQ17R55 369 aa25.6■■□□□ 1.69
SSNA1-203ENST00000463511 SPECC1Q5M775 1068 aa25.6■■□□□ 1.69
SSNA1-203ENST00000463511 GRASPQ7Z6J2 395 aaPredicted RBP25.6■■□□□ 1.69
SSNA1-203ENST00000463511 BSNDQ8WZ55 320 aa25.6■■□□□ 1.69
SSNA1-203ENST00000463511 CLSTN3Q9BQT9 956 aa25.6■■□□□ 1.69
SSNA1-203ENST00000463511 TUFT1Q9NNX1 390 aa25.6■■□□□ 1.69
SSNA1-203ENST00000463511 ARHGEF3Q9NR81 526 aa25.6■■□□□ 1.69
SSNA1-203ENST00000463511 USP20Q9Y2K6 914 aa25.6■■□□□ 1.69
SSNA1-203ENST00000463511 PATJQ8NI35 1801 aa25.6■■□□□ 1.69
SSNA1-203ENST00000463511 CACNA1IQ9P0X4 2223 aa25.59■■□□□ 1.69
SSNA1-203ENST00000463511 THP07101 528 aa25.59■■□□□ 1.69
SSNA1-203ENST00000463511 DCNP07585 359 aaKnown RBP25.59■■□□□ 1.69
SSNA1-203ENST00000463511 NTHL1P78549 312 aa25.59■■□□□ 1.69
SSNA1-203ENST00000463511 PRPF4BQ13523 1007 aaKnown RBP25.59■■□□□ 1.69
SSNA1-203ENST00000463511 LIN9Q5TKA1 542 aa25.59■■□□□ 1.69
SSNA1-203ENST00000463511 NOSTRINQ8IVI9 506 aa25.59■■□□□ 1.69
SSNA1-203ENST00000463511 LNX1Q8TBB1 728 aaPredicted RBP25.59■■□□□ 1.69
SSNA1-203ENST00000463511 PIK3R5Q8WYR1 880 aa25.59■■□□□ 1.69
SSNA1-203ENST00000463511 EP300Q09472 2414 aaPredicted RBP25.58■■□□□ 1.69
SSNA1-203ENST00000463511 EDN1P05305 212 aa25.58■■□□□ 1.69
SSNA1-203ENST00000463511 LIG1P18858 919 aa25.58■■□□□ 1.69
SSNA1-203ENST00000463511 NAB2Q15742 525 aa25.58■■□□□ 1.69
SSNA1-203ENST00000463511 RPP25Q9BUL9 199 aaKnown RBP25.58■■□□□ 1.69
SSNA1-203ENST00000463511 C2orf40Q9H1Z8 148 aa25.58■■□□□ 1.69
SSNA1-203ENST00000463511 DMXL1Q9Y485 3027 aa25.58■■□□□ 1.68
SSNA1-203ENST00000463511 ADAM12O43184 909 aa25.57■■□□□ 1.68
SSNA1-203ENST00000463511 PRKCBP05771 671 aa25.57■■□□□ 1.68
SSNA1-203ENST00000463511 C8AP07357 584 aa25.57■■□□□ 1.68
SSNA1-203ENST00000463511 SAFBQ15424 915 aaKnown RBP eCLIP25.57■■□□□ 1.68
SSNA1-203ENST00000463511 MAPK6Q16659 721 aa25.57■■□□□ 1.68
SSNA1-203ENST00000463511 PPM1LQ5SGD2 360 aa25.57■■□□□ 1.68
SSNA1-203ENST00000463511 LARP1BQ659C4 914 aaKnown RBP25.57■■□□□ 1.68
SSNA1-203ENST00000463511 PHLDB3Q6NSJ2 640 aa25.57■■□□□ 1.68
SSNA1-203ENST00000463511 DCLRE1AQ6PJP8 1040 aa25.57■■□□□ 1.68
SSNA1-203ENST00000463511 FGF14Q92915 247 aa25.57■■□□□ 1.68
SSNA1-203ENST00000463511 NACC1Q96RE7 527 aa25.57■■□□□ 1.68
SSNA1-203ENST00000463511 ADPGKQ9BRR6 497 aa25.57■■□□□ 1.68
SSNA1-203ENST00000463511 CCDC113Q9H0I3 377 aa25.57■■□□□ 1.68
SSNA1-203ENST00000463511 SLC2A4RGQ9NR83 387 aa25.57■■□□□ 1.68
SSNA1-203ENST00000463511 POLIQ9UNA4 740 aa25.57■■□□□ 1.68
SSNA1-203ENST00000463511 R4GN57 208 aa25.57■■□□□ 1.68
SSNA1-203ENST00000463511 CITO14578 2027 aa25.57■■□□□ 1.68
SSNA1-203ENST00000463511 FRYLO94915 3013 aa25.56■■□□□ 1.68
SSNA1-203ENST00000463511 CCL16O15467 120 aa25.56■■□□□ 1.68
SSNA1-203ENST00000463511 HNRNPA1P09651 372 aaKnown RBP eCLIP25.56■■□□□ 1.68
SSNA1-203ENST00000463511 FOXK2Q01167 660 aa25.56■■□□□ 1.68
SSNA1-203ENST00000463511 PADI6Q6TGC4 694 aa25.56■■□□□ 1.68
SSNA1-203ENST00000463511 PARM1Q6UWI2 310 aa25.56■■□□□ 1.68
SSNA1-203ENST00000463511 POLR3CQ9BUI4 534 aaPredicted RBP25.56■■□□□ 1.68
SSNA1-203ENST00000463511 CDH7Q9ULB5 785 aa25.56■■□□□ 1.68
SSNA1-203ENST00000463511 GDAQ9Y2T3 454 aa25.56■■□□□ 1.68
SSNA1-203ENST00000463511 SIT1Q9Y3P8 196 aa25.56■■□□□ 1.68
SSNA1-203ENST00000463511 ZFP37Q9Y6Q3 630 aaPredicted RBP25.56■■□□□ 1.68
SSNA1-203ENST00000463511 ARHGEF35A5YM69 484 aa25.55■■□□□ 1.68
SSNA1-203ENST00000463511 EEF1DP3Q658K8 133 aa25.55■■□□□ 1.68
SSNA1-203ENST00000463511 KCNG4Q8TDN1 519 aa25.55■■□□□ 1.68
SSNA1-203ENST00000463511 FOXQ1Q9C009 403 aa25.55■■□□□ 1.68
SSNA1-203ENST00000463511 FOXP1Q9H334 677 aaPredicted RBP25.55■■□□□ 1.68
SSNA1-203ENST00000463511 DLGAP2Q9P1A6 1054 aa25.55■■□□□ 1.68
SSNA1-203ENST00000463511 ACKR2O00590 384 aa25.54■■□□□ 1.68
SSNA1-203ENST00000463511 NAMPTP43490 491 aa25.54■■□□□ 1.68
SSNA1-203ENST00000463511 ELAVL2Q12926 359 aaKnown RBP25.54■■□□□ 1.68
SSNA1-203ENST00000463511 SPRYD3Q8NCJ5 442 aa25.54■■□□□ 1.68
SSNA1-203ENST00000463511 DEPTORQ8TB45 409 aa25.54■■□□□ 1.68
SSNA1-203ENST00000463511 SLC7A14Q8TBB6 771 aa25.54■■□□□ 1.68
SSNA1-203ENST00000463511 KIFC3Q9BVG8 833 aa25.54■■□□□ 1.68
SSNA1-203ENST00000463511 PDCD11Q14690 1871 aaKnown RBP25.53■■□□□ 1.68
SSNA1-203ENST00000463511 LMNAP02545 664 aaKnown RBP25.53■■□□□ 1.68
SSNA1-203ENST00000463511 HSP90AA1P07900 732 aaKnown RBP25.53■■□□□ 1.68
SSNA1-203ENST00000463511 CYP11B2P19099 503 aa25.53■■□□□ 1.68
SSNA1-203ENST00000463511 RPA1P27694 616 aa25.53■■□□□ 1.68
SSNA1-203ENST00000463511 HOXA9P31269 272 aa25.53■■□□□ 1.68
SSNA1-203ENST00000463511 ID4P47928 161 aa25.53■■□□□ 1.68
SSNA1-203ENST00000463511 GPC5P78333 572 aa25.53■■□□□ 1.68
SSNA1-203ENST00000463511 BECN1Q14457 450 aa25.53■■□□□ 1.68
SSNA1-203ENST00000463511 GLRA4Q5JXX5 417 aa25.53■■□□□ 1.68
SSNA1-203ENST00000463511 AXDND1Q5T1B0 1012 aaPredicted RBP25.53■■□□□ 1.68
SSNA1-203ENST00000463511 PDXDC1Q6P996 788 aa25.53■■□□□ 1.68
SSNA1-203ENST00000463511 PJA1Q8NG27 643 aa25.53■■□□□ 1.68
SSNA1-203ENST00000463511 ERMNQ8TAM6 284 aa25.53■■□□□ 1.68
SSNA1-203ENST00000463511 FGF13Q92913 245 aa25.53■■□□□ 1.68
SSNA1-203ENST00000463511 POLD4Q9HCU8 107 aa25.53■■□□□ 1.68
SSNA1-203ENST00000463511 H3BQV1 296 aa25.52■■□□□ 1.68
SSNA1-203ENST00000463511 XYLBO75191 536 aa25.52■■□□□ 1.68
SSNA1-203ENST00000463511 OR52Z1P0C646 297 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms