RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 RTN1Q16799 776 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 XKR3Q5GH77 459 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 ZBTB41Q5SVQ8 909 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 DIEXFQ68CQ4 756 aaKnown RBP8.64□□□□□ -1.03
SMC3-202ENST00000462899 LAIR1Q6GTX8 287 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 FUT10Q6P4F1 479 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 NYAP1Q6ZVC0 841 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 GRASPQ7Z6J2 395 aaPredicted RBP8.64□□□□□ -1.03
SMC3-202ENST00000462899 PALB2Q86YC2 1186 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 NPAS3Q8IXF0 933 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 ITFG1Q8TB96 612 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 PHKBQ93100 1093 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 GJA10Q969M2 543 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 ZFP42Q96MM3 310 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 FAM193BQ96PV7 902 aaPredicted RBP8.64□□□□□ -1.03
SMC3-202ENST00000462899 MTRQ99707 1265 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 CHRDQ9H2X0 955 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 PIDD1Q9HB75 910 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 PLA2G2EQ9NZK7 142 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 SAMM50Q9Y512 469 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 IPPQ9Y573 584 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 NUP210Q8TEM1 1887 aaPredicted RBP8.64□□□□□ -1.03
SMC3-202ENST00000462899 CELSR3Q9NYQ7 3312 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 TM4SF5O14894 197 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 RETP07949 1114 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 CD46P15529 392 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 RPL17P18621 184 aaKnown RBP8.63□□□□□ -1.03
SMC3-202ENST00000462899 MLH1P40692 756 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 OR1G1P47890 313 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 SCNN1GP51170 649 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 RCAN1P53805 252 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 EXOSC10Q01780 885 aaKnown RBP8.63□□□□□ -1.03
SMC3-202ENST00000462899 COL9A2Q14055 689 aaPredicted RBP8.63□□□□□ -1.03
SMC3-202ENST00000462899 USP41Q3LFD5 358 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 KMT5BQ4FZB7 885 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 RTP2Q5QGT7 225 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 PRR23CQ6ZRP0 262 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 TPRG1Q6ZUI0 275 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 SRGAP1Q7Z6B7 1085 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 REXO1Q8N1G1 1221 aaKnown RBP8.63□□□□□ -1.03
SMC3-202ENST00000462899 CNNM3Q8NE01 707 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 NLRP4Q96MN2 994 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 GAD1Q99259 594 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 NELL2Q99435 816 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 KXD1Q9BQD3 176 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 CLSTN3Q9BQT9 956 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 EIF2AQ9BY44 585 aaKnown RBP8.63□□□□□ -1.03
SMC3-202ENST00000462899 PLA2G2FQ9BZM2 168 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 DHX33Q9H6R0 707 aaKnown RBP8.63□□□□□ -1.03
SMC3-202ENST00000462899 UBN1Q9NPG3 1134 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 SEMA4GQ9NTN9 838 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 TCEAL9Q9UHQ7 104 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 GMEB2Q9UKD1 530 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 ADAM28Q9UKQ2 775 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 COL4A3BPQ9Y5P4 624 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 KIAA1549LQ6ZVL6 1849 aa8.63□□□□□ -1.03
SMC3-202ENST00000462899 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.62□□□□□ -1.03
SMC3-202ENST00000462899 ZBTB43O43298 467 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 CHMP2AO43633 222 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 GDF9O60383 454 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 TSPAN1O60635 241 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 GAS7O60861 476 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 ECI2O75521 394 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 FCARP24071 287 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 DNM2P50570 870 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 LIMK1P53667 647 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 CREMQ03060 361 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 ADCY1Q08828 1119 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 CSRP2Q16527 193 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 Q4G0T1 1027 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 LRCH2Q5VUJ6 765 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 CREB3L3Q68CJ9 461 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 PLA2G4FQ68DD2 849 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 BLOC1S3Q6QNY0 202 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 PRSS55Q6UWB4 352 aaPredicted RBP8.62□□□□□ -1.03
SMC3-202ENST00000462899 GLYCTKQ8IVS8 523 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 CELF5Q8N6W0 485 aaKnown RBP8.62□□□□□ -1.03
SMC3-202ENST00000462899 LNX1Q8TBB1 728 aaPredicted RBP8.62□□□□□ -1.03
SMC3-202ENST00000462899 ETNPPLQ8TBG4 499 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 PIK3R5Q8WYR1 880 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 DNASE1L2Q92874 299 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 IER2Q9BTL4 223 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 PHF20Q9BVI0 1012 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 TEKT3Q9BXF9 490 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 HEBP1Q9NRV9 189 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 WRAP73Q9P2S5 460 aaPredicted RBP8.62□□□□□ -1.03
SMC3-202ENST00000462899 ANGPTL2Q9UKU9 493 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 KCNH3Q9ULD8 1083 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 HES2Q9Y543 173 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 PCDHB3Q9Y5E6 796 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 IGSF10Q6WRI0 2623 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 MYO16Q9Y6X6 1858 aa8.62□□□□□ -1.03
SMC3-202ENST00000462899 NUP205Q92621 2012 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 CYP3A7-CYP3A51PA0A087WV96 503 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 NRG2O14511 850 aaPredicted RBP8.61□□□□□ -1.03
SMC3-202ENST00000462899 NCAM2O15394 837 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 ADAM12O43184 909 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 ACTN4O43707 911 aaKnown RBP8.61□□□□□ -1.03
SMC3-202ENST00000462899 PAPSS2O95340 614 aaPredicted RBP8.61□□□□□ -1.03
SMC3-202ENST00000462899 C8AP07357 584 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms