RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 RTKN2Q8IZC4 609 aa4.98□□□□□ -1.61
UBDP1-202ENST00000457888 IFNL3Q8IZI9 196 aa4.98□□□□□ -1.61
UBDP1-202ENST00000457888 NLGN4XQ8N0W4 816 aa4.98□□□□□ -1.61
UBDP1-202ENST00000457888 C8orf58Q8NAV2 365 aa4.98□□□□□ -1.61
UBDP1-202ENST00000457888 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.98□□□□□ -1.61
UBDP1-202ENST00000457888 MFSD3Q96ES6 412 aa4.98□□□□□ -1.61
UBDP1-202ENST00000457888 TARS2Q9BW92 718 aaKnown RBP4.98□□□□□ -1.61
UBDP1-202ENST00000457888 NRDE2Q9H7Z3 1164 aa4.98□□□□□ -1.61
UBDP1-202ENST00000457888 TRIM39Q9HCM9 518 aa4.98□□□□□ -1.61
UBDP1-202ENST00000457888 DDX56Q9NY93 547 aaKnown RBP4.98□□□□□ -1.61
UBDP1-202ENST00000457888 NDOR1Q9UHB4 597 aa4.98□□□□□ -1.61
UBDP1-202ENST00000457888 SFMBT1Q9UHJ3 866 aa4.98□□□□□ -1.61
UBDP1-202ENST00000457888 MAP3K5Q99683 1374 aa4.98□□□□□ -1.61
UBDP1-202ENST00000457888 TNS1Q9HBL0 1735 aaKnown RBP4.97□□□□□ -1.61
UBDP1-202ENST00000457888 BTAF1O14981 1849 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 MRC1P22897 1456 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 TCRBV5S4A2TA0A5A2 114 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 GSG1L2A8MUP6 293 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 PDE8AO60658 829 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 RPS6KA4O75676 772 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 HSP90AB1P08238 724 aaKnown RBP4.97□□□□□ -1.61
UBDP1-202ENST00000457888 PROZP22891 400 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 GABREP78334 506 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 SLFN5Q08AF3 891 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 PCBP1Q15365 356 aaKnown RBP eCLIP4.97□□□□□ -1.61
UBDP1-202ENST00000457888 C1orf141Q5JVX7 400 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 CNNM4Q6P4Q7 775 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 BRAPQ7Z569 592 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 RNF180Q86T96 592 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 DDX42Q86XP3 938 aaKnown RBP eCLIP4.97□□□□□ -1.61
UBDP1-202ENST00000457888 WDR63Q8IWG1 891 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 ANKRD35Q8N283 1001 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 PRPF38AQ8NAV1 312 aaKnown RBP4.97□□□□□ -1.61
UBDP1-202ENST00000457888 GSTCDQ8NEC7 633 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 GPR150Q8NGU9 434 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 PTPRN2Q92932 1015 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 TSR2Q969E8 191 aaKnown RBP4.97□□□□□ -1.61
UBDP1-202ENST00000457888 ZNF764Q96H86 408 aaPredicted RBP4.97□□□□□ -1.61
UBDP1-202ENST00000457888 SCLYQ96I15 445 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 WNK4Q96J92 1243 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 PNNQ9H307 717 aaKnown RBP4.97□□□□□ -1.61
UBDP1-202ENST00000457888 TMX1Q9H3N1 280 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 IPPKQ9H8X2 491 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 PTGFRNQ9P2B2 879 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 SRPK3Q9UPE1 567 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 KCPQ6ZWJ8 1503 aa4.97□□□□□ -1.61
UBDP1-202ENST00000457888 A0A0G2JNJ9 132 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.96□□□□□ -1.62
UBDP1-202ENST00000457888 RHOBTB3O94955 611 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 LMNAP02545 664 aaKnown RBP4.96□□□□□ -1.62
UBDP1-202ENST00000457888 CYP19A1P11511 503 aaPredicted RBP4.96□□□□□ -1.62
UBDP1-202ENST00000457888 PTGS2P35354 604 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 STAT3P40763 770 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 SCNN1GP51170 649 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 RIN1Q13671 783 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 ZNF460Q14592 562 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 STYK1Q6J9G0 422 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 MAMDC2Q7Z304 686 aaPredicted RBP4.96□□□□□ -1.62
UBDP1-202ENST00000457888 BTBD2Q9BX70 525 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 MTFR1LQ9H019 292 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 TMOD3Q9NYL9 352 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 Q9UFV3 132 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 FAM184BQ9ULE4 1060 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 G3BP2Q9UN86 482 aaKnown RBP4.96□□□□□ -1.62
UBDP1-202ENST00000457888 SH3BP1Q9Y3L3 701 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 TRAF6Q9Y4K3 522 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 DOT1LQ8TEK3 1739 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 NHSQ6T4R5 1651 aa4.96□□□□□ -1.62
UBDP1-202ENST00000457888 LY75O60449 1722 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 LRP5O75197 1615 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 ELL2O00472 640 aaPredicted RBP4.95□□□□□ -1.62
UBDP1-202ENST00000457888 EFCAB14O75071 495 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 PARNO95453 639 aaKnown RBP4.95□□□□□ -1.62
UBDP1-202ENST00000457888 A1BGP04217 495 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 AOAHP28039 575 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 CNGA1P29973 690 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 PIP4K2AP48426 406 aaPredicted RBP4.95□□□□□ -1.62
UBDP1-202ENST00000457888 CD83Q01151 205 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 PROSER3Q2NL68 480 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 MBNL2Q5VZF2 373 aaKnown RBP4.95□□□□□ -1.62
UBDP1-202ENST00000457888 TMEM200BQ69YZ2 307 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 Q6ZRM9 215 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 LHFPL2Q6ZUX7 228 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 MRGPREQ86SM8 312 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 LRRTM3Q86VH5 581 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 PRIMA1Q86XR5 153 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 RAVER1Q8IY67 606 aaKnown RBP4.95□□□□□ -1.62
UBDP1-202ENST00000457888 WDR48Q8TAF3 677 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 HAS1Q92839 578 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 ALG1Q9BT22 464 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 INTS7Q9NVH2 962 aaKnown RBP4.95□□□□□ -1.62
UBDP1-202ENST00000457888 BABAM1Q9NWV8 329 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 ATP8A1Q9Y2Q0 1164 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 TNPO3Q9Y5L0 923 aaKnown RBP4.95□□□□□ -1.62
UBDP1-202ENST00000457888 IL16Q14005 1332 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 MAPK8IP3Q9UPT6 1336 aa4.95□□□□□ -1.62
UBDP1-202ENST00000457888 PALLDQ8WX93 1383 aa4.94□□□□□ -1.62
UBDP1-202ENST00000457888 UBR2Q8IWV8 1755 aa4.94□□□□□ -1.62
UBDP1-202ENST00000457888 MASP2O00187 686 aa4.94□□□□□ -1.62
UBDP1-202ENST00000457888 TRAF5O00463 557 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms