RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 RBM23Q86U06 439 aaKnown RBP13.42□□□□□ -0.26
C9orf139-201ENST00000457302 CD302Q8IX05 232 aa13.42□□□□□ -0.26
C9orf139-201ENST00000457302 VPS52Q8N1B4 723 aa13.42□□□□□ -0.26
C9orf139-201ENST00000457302 CEP120Q8N960 986 aa13.42□□□□□ -0.26
C9orf139-201ENST00000457302 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
C9orf139-201ENST00000457302 DDX27Q96GQ7 796 aaKnown RBP13.42□□□□□ -0.26
C9orf139-201ENST00000457302 UROC1Q96N76 676 aa13.42□□□□□ -0.26
C9orf139-201ENST00000457302 TSPAN18Q96SJ8 248 aa13.42□□□□□ -0.26
C9orf139-201ENST00000457302 FIZ1Q96SL8 496 aa13.42□□□□□ -0.26
C9orf139-201ENST00000457302 THEGQ9P2T0 379 aa13.42□□□□□ -0.26
C9orf139-201ENST00000457302 AGO2Q9UKV8 859 aaKnown RBP13.42□□□□□ -0.26
C9orf139-201ENST00000457302 A0A0B4J269 797 aa13.41□□□□□ -0.26
C9orf139-201ENST00000457302 FAM237AA0A1B0GTK4 181 aa13.41□□□□□ -0.26
C9orf139-201ENST00000457302 SMIM28A0A1B0GU29 152 aa13.41□□□□□ -0.26
C9orf139-201ENST00000457302 TRAPPC3O43617 180 aa13.41□□□□□ -0.26
C9orf139-201ENST00000457302 PRPF6O94906 941 aaKnown RBP13.41□□□□□ -0.26
C9orf139-201ENST00000457302 KIF20AO95235 890 aa13.41□□□□□ -0.26
C9orf139-201ENST00000457302 PPP2R3AQ06190 1150 aa13.41□□□□□ -0.26
C9orf139-201ENST00000457302 DSC1Q08554 894 aa13.41□□□□□ -0.26
C9orf139-201ENST00000457302 CUL4BQ13620 913 aa13.41□□□□□ -0.26
C9orf139-201ENST00000457302 HSP90AA2PQ14568 343 aaPredicted RBP13.41□□□□□ -0.26
C9orf139-201ENST00000457302 DCLRE1AQ6PJP8 1040 aa13.41□□□□□ -0.26
C9orf139-201ENST00000457302 KRBA2Q6ZNG9 492 aa13.41□□□□□ -0.26
C9orf139-201ENST00000457302 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.41□□□□□ -0.26
C9orf139-201ENST00000457302 GSTCDQ8NEC7 633 aa13.41□□□□□ -0.26
C9orf139-201ENST00000457302 NOC3LQ8WTT2 800 aaKnown RBP13.41□□□□□ -0.26
C9orf139-201ENST00000457302 ATXN2LQ8WWM7 1075 aaKnown RBP13.41□□□□□ -0.26
C9orf139-201ENST00000457302 CDCA3Q99618 268 aaPredicted RBP13.41□□□□□ -0.26
C9orf139-201ENST00000457302 EMILIN2Q9BXX0 1053 aa13.41□□□□□ -0.26
C9orf139-201ENST00000457302 MRPL17Q9NRX2 175 aaKnown RBP13.41□□□□□ -0.26
C9orf139-201ENST00000457302 EXOC1Q9NV70 894 aa13.41□□□□□ -0.26
C9orf139-201ENST00000457302 CLDND1Q9NY35 253 aa13.41□□□□□ -0.26
C9orf139-201ENST00000457302 CHD7Q9P2D1 2997 aa13.41□□□□□ -0.26
C9orf139-201ENST00000457302 CASTOR2A6NHX0 329 aa13.4□□□□□ -0.26
C9orf139-201ENST00000457302 ANKRD63C9JTQ0 380 aa13.4□□□□□ -0.26
C9orf139-201ENST00000457302 KIAA0391O15091 583 aaKnown RBP13.4□□□□□ -0.26
C9orf139-201ENST00000457302 ACTN4O43707 911 aaKnown RBP13.4□□□□□ -0.26
C9orf139-201ENST00000457302 MYBP10242 640 aa13.4□□□□□ -0.26
C9orf139-201ENST00000457302 GARTP22102 1010 aa13.4□□□□□ -0.26
C9orf139-201ENST00000457302 IRS1P35568 1242 aa13.4□□□□□ -0.26
C9orf139-201ENST00000457302 NRIP1P48552 1158 aa13.4□□□□□ -0.26
C9orf139-201ENST00000457302 MRPS5P82675 430 aaKnown RBP13.4□□□□□ -0.26
C9orf139-201ENST00000457302 ELAVL2Q12926 359 aaKnown RBP13.4□□□□□ -0.26
C9orf139-201ENST00000457302 CAMK1Q14012 370 aa13.4□□□□□ -0.26
C9orf139-201ENST00000457302 USP41Q3LFD5 358 aa13.4□□□□□ -0.26
C9orf139-201ENST00000457302 SEZ6Q53EL9 994 aa13.4□□□□□ -0.26
C9orf139-201ENST00000457302 GLRA4Q5JXX5 417 aa13.4□□□□□ -0.26
C9orf139-201ENST00000457302 ALKAL1Q6UXT8 129 aa13.4□□□□□ -0.26
C9orf139-201ENST00000457302 MRPL43Q8N983 215 aaKnown RBP13.4□□□□□ -0.26
C9orf139-201ENST00000457302 ZNF507Q8TCN5 953 aa13.4□□□□□ -0.26
C9orf139-201ENST00000457302 PABPC5Q96DU9 382 aaKnown RBP13.4□□□□□ -0.26
C9orf139-201ENST00000457302 STRA6Q9BX79 667 aa13.4□□□□□ -0.26
C9orf139-201ENST00000457302 ADAM28Q9UKQ2 775 aa13.4□□□□□ -0.26
C9orf139-201ENST00000457302 CDH23Q9H251 3354 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 ABLIM1O14639 778 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 PTGESO14684 152 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 EIF3DO15371 548 aaKnown RBP eCLIP13.39□□□□□ -0.27
C9orf139-201ENST00000457302 PPP1R37O75864 691 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 B3GAT3O94766 335 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 SOD2P04179 222 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 URODP06132 367 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 CTSAP10619 480 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 KCNE1P15382 129 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 CASP1P29466 404 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 RPL9P32969 192 aaKnown RBP13.39□□□□□ -0.27
C9orf139-201ENST00000457302 ACOT2P49753 483 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 NDUFV1P49821 464 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 SNRPFP62306 86 aaKnown RBP13.39□□□□□ -0.27
C9orf139-201ENST00000457302 POU5F1Q01860 360 aaKnown RBP13.39□□□□□ -0.27
C9orf139-201ENST00000457302 SLC10A6Q3KNW5 377 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 XKR4Q5GH76 650 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 ARMCX5Q6P1M9 558 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 HS2ST1Q7LGA3 356 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 PPFIBP1Q86W92 1011 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 GRAMD1CQ8IYS0 662 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 KIF12Q96FN5 646 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 SNX27Q96L92 541 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 PPP1R10Q96QC0 940 aaKnown RBP13.39□□□□□ -0.27
C9orf139-201ENST00000457302 SLC39A2Q9NP94 309 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 CNTN3Q9P232 1028 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 UBQLN1Q9UMX0 589 aaKnown RBP13.39□□□□□ -0.27
C9orf139-201ENST00000457302 FAM50BQ9Y247 325 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 R3HCC1Q9Y3T6 440 aaKnown RBP13.39□□□□□ -0.27
C9orf139-201ENST00000457302 NUB1Q9Y5A7 615 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 STYXL1Q9Y6J8 313 aa13.39□□□□□ -0.27
C9orf139-201ENST00000457302 SF3B1O75533 1304 aaKnown RBP eCLIP13.39□□□□□ -0.27
C9orf139-201ENST00000457302 COL6A3P12111 3177 aa13.38□□□□□ -0.27
C9orf139-201ENST00000457302 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.38□□□□□ -0.27
C9orf139-201ENST00000457302 LACTBL1A8MY62 500 aa13.38□□□□□ -0.27
C9orf139-201ENST00000457302 FSCN2O14926 492 aa13.38□□□□□ -0.27
C9orf139-201ENST00000457302 PER2O15055 1255 aa13.38□□□□□ -0.27
C9orf139-201ENST00000457302 SMC2O95347 1197 aa13.38□□□□□ -0.27
C9orf139-201ENST00000457302 RPN1P04843 607 aaKnown RBP13.38□□□□□ -0.27
C9orf139-201ENST00000457302 CXCL8P10145 99 aa13.38□□□□□ -0.27
C9orf139-201ENST00000457302 KLRC2P26717 231 aa13.38□□□□□ -0.27
C9orf139-201ENST00000457302 FAM160A1Q05DH4 1040 aa13.38□□□□□ -0.27
C9orf139-201ENST00000457302 HYAL1Q12794 435 aa13.38□□□□□ -0.27
C9orf139-201ENST00000457302 PUS10Q3MIT2 529 aaKnown RBP13.38□□□□□ -0.27
C9orf139-201ENST00000457302 KMT5BQ4FZB7 885 aa13.38□□□□□ -0.27
C9orf139-201ENST00000457302 FUT10Q6P4F1 479 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms