RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 GPR62Q9BZJ7 368 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 S1PR5Q9H228 398 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 EPHX3Q9H6B9 360 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 PDCD11Q14690 1871 aaKnown RBP17.76■□□□□ 0.43
CPSF6-203ENST00000456847 TOM1L1O75674 476 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 KIF4AO95239 1232 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 PROZP22891 400 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 DDIT3P35638 169 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 NASPP49321 788 aaPredicted RBP17.76■□□□□ 0.43
CPSF6-203ENST00000456847 ZPBP2Q6X784 338 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 SUSD6Q92537 303 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 RPGRIP1Q96KN7 1286 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 C1QTNF1Q9BXJ1 281 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 TRAK2O60296 914 aa17.75■□□□□ 0.43
CPSF6-203ENST00000456847 PDIA4P13667 645 aaKnown RBP17.75■□□□□ 0.43
CPSF6-203ENST00000456847 STAT6P42226 847 aa17.75■□□□□ 0.43
CPSF6-203ENST00000456847 LIG4P49917 911 aa17.75■□□□□ 0.43
CPSF6-203ENST00000456847 DSG1Q02413 1049 aa17.75■□□□□ 0.43
CPSF6-203ENST00000456847 ITIH3Q06033 890 aa17.75■□□□□ 0.43
CPSF6-203ENST00000456847 FOXD4L6Q3SYB3 417 aaPredicted RBP17.75■□□□□ 0.43
CPSF6-203ENST00000456847 FOXD4L3Q6VB84 417 aaPredicted RBP17.75■□□□□ 0.43
CPSF6-203ENST00000456847 CCDC73Q6ZRK6 1079 aa17.75■□□□□ 0.43
CPSF6-203ENST00000456847 DYMQ7RTS9 669 aa17.75■□□□□ 0.43
CPSF6-203ENST00000456847 C12orf76Q8N812 135 aaPredicted RBP17.75■□□□□ 0.43
CPSF6-203ENST00000456847 RIN2Q8WYP3 895 aaPredicted RBP17.75■□□□□ 0.43
CPSF6-203ENST00000456847 SNX27Q96L92 541 aa17.75■□□□□ 0.43
CPSF6-203ENST00000456847 FBXL18Q96ME1 805 aa17.75■□□□□ 0.43
CPSF6-203ENST00000456847 TFIP11Q9UBB9 837 aaKnown RBP17.75■□□□□ 0.43
CPSF6-203ENST00000456847 MORC2Q9Y6X9 1032 aaPredicted RBP17.75■□□□□ 0.43
CPSF6-203ENST00000456847 ABLIM1O14639 778 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 CLDN3O15551 220 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 LILRB3O75022 631 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 ZSCAN22P10073 491 aaPredicted RBP17.74■□□□□ 0.43
CPSF6-203ENST00000456847 CLCN4P51793 760 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 ZNF131P52739 623 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 NAB2Q15742 525 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 KIAA0319Q5VV43 1072 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 PPP1R10Q96QC0 940 aaKnown RBP17.74■□□□□ 0.43
CPSF6-203ENST00000456847 ADAM7Q9H2U9 754 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 HNRNPDLO14979 420 aaKnown RBP17.74■□□□□ 0.43
CPSF6-203ENST00000456847 SPTLC2O15270 562 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 TEX28O15482 410 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 BRD1O95696 1058 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 EFEMP2O95967 443 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 F13A1P00488 732 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 SCP2P22307 547 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 CREMQ03060 361 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 SEZ6Q53EL9 994 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 ELMSAN1Q6PJG2 1045 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 SV2BQ7L1I2 683 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 CEP57Q86XR8 500 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 GLYCTKQ8IVS8 523 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 LINC00301Q8NCQ3 95 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 RIPOR3Q96MK2 946 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 UROC1Q96N76 676 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 SFXN1Q9H9B4 322 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 GOLGA2P5Q9HBQ8 144 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.74■□□□□ 0.43
CPSF6-203ENST00000456847 SLC38A7Q9NVC3 462 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 CDH22Q9UJ99 828 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 TBX20Q9UMR3 447 aa17.74■□□□□ 0.43
CPSF6-203ENST00000456847 SMIM28A0A1B0GU29 152 aa17.73■□□□□ 0.43
CPSF6-203ENST00000456847 GLUD1P00367 558 aa17.73■□□□□ 0.43
CPSF6-203ENST00000456847 ALADP13716 330 aa17.73■□□□□ 0.43
CPSF6-203ENST00000456847 SP100P23497 879 aaPredicted RBP17.73■□□□□ 0.43
CPSF6-203ENST00000456847 MTHFRP42898 656 aa17.73■□□□□ 0.43
CPSF6-203ENST00000456847 ELAVL2Q12926 359 aaKnown RBP17.73■□□□□ 0.43
CPSF6-203ENST00000456847 FAM171A1Q5VUB5 890 aa17.73■□□□□ 0.43
CPSF6-203ENST00000456847 NECTIN4Q96NY8 510 aa17.73■□□□□ 0.43
CPSF6-203ENST00000456847 PANK2Q9BZ23 570 aa17.73■□□□□ 0.43
CPSF6-203ENST00000456847 MAN1C1Q9NR34 630 aa17.73■□□□□ 0.43
CPSF6-203ENST00000456847 TSHZ2Q9NRE2 1034 aa17.73■□□□□ 0.43
CPSF6-203ENST00000456847 CHST7Q9NS84 486 aa17.73■□□□□ 0.43
CPSF6-203ENST00000456847 PI4K2BG5E9Z4 385 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 DCXO43602 365 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 WEE2P0C1S8 567 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 NMT1P30419 496 aaKnown RBP17.72■□□□□ 0.43
CPSF6-203ENST00000456847 ABCD1P33897 745 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 MCL1Q07820 350 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 KANK3Q6NY19 840 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 RNF135Q8IUD6 432 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 PDILTQ8N807 584 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 RXFP1Q9HBX9 757 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 VWA8A3KMH1 1905 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 LOC730098B7Z3J9 87 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 PPP6R2O75170 966 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 B3GAT3O94766 335 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 YEATS4O95619 227 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 CLCNKBP51801 687 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 RTP2Q5QGT7 225 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 PRSS55Q6UWB4 352 aaPredicted RBP17.72■□□□□ 0.43
CPSF6-203ENST00000456847 TMC5Q6UXY8 1006 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 SFR1Q86XK3 245 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 DDX12PQ92771 950 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 TTPALQ9BTX7 342 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 CNTN3Q9P232 1028 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 DPP7Q9UHL4 492 aa17.72■□□□□ 0.43
CPSF6-203ENST00000456847 C2orf16Q68DN1 1984 aa17.71■□□□□ 0.43
CPSF6-203ENST00000456847 FAM86C2PA6NEL3 165 aa17.71■□□□□ 0.43
CPSF6-203ENST00000456847 MYBP10242 640 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms