RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 SNX27Q96L92 541 aa18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 ASB7Q9H672 318 aa18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 ELAC1Q9H777 363 aaKnown RBP18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 PDE11AQ9HCR9 933 aa18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 TOPORSQ9NS56 1045 aaPredicted RBP18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 PCDH10Q9P2E7 1040 aa18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 ABHD14A-ACY1A0A1B0GW23 586 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 LRRIQ3A6PVS8 624 aaPredicted RBP18■□□□□ 0.47
CCDC90B-202ENST00000455220 ITGA4P13612 1032 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 SYN1P17600 705 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 AKAP5P24588 427 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 COPB1P53618 953 aaKnown RBP18■□□□□ 0.47
CCDC90B-202ENST00000455220 YARSP54577 528 aaKnown RBP18■□□□□ 0.47
CCDC90B-202ENST00000455220 DLG4P78352 724 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 FANCCQ00597 558 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 MIIPQ5JXC2 388 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 AGMOQ6ZNB7 445 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 CREBRFQ8IUR6 639 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 CRIPAKQ8N1N5 446 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 PGBD4Q96DM1 585 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 APOL6Q9BWW8 343 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 GRPEL1Q9HAV7 217 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 TAB2Q9NYJ8 693 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 ZMYND8Q9ULU4 1186 aaPredicted RBP18■□□□□ 0.47
CCDC90B-202ENST00000455220 GIT1Q9Y2X7 761 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18■□□□□ 0.47
CCDC90B-202ENST00000455220 TRIP11Q15643 1979 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 MEIS3P2A8K0S8 358 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 LACTBL1A8MY62 500 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 EFCAB14O75071 495 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 TRIM49P0CI25 452 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 TRIM49CP0CI26 452 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 DCAF17Q5H9S7 520 aaPredicted RBP18■□□□□ 0.47
CCDC90B-202ENST00000455220 C16orf59Q7L2K0 433 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 CCDC127Q96BQ5 260 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 CGRRF1Q99675 332 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 UBN1Q9NPG3 1134 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 TMEM161AQ9NX61 479 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 CNTN3Q9P232 1028 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 PARP2Q9UGN5 583 aa18■□□□□ 0.47
CCDC90B-202ENST00000455220 PDCD11Q14690 1871 aaKnown RBP18■□□□□ 0.47
CCDC90B-202ENST00000455220 A0A1B0GTH6 734 aa17.99■□□□□ 0.47
CCDC90B-202ENST00000455220 INPPL1O15357 1258 aa17.99■□□□□ 0.47
CCDC90B-202ENST00000455220 AP5Z1O43299 807 aa17.99■□□□□ 0.47
CCDC90B-202ENST00000455220 BAIAP3O94812 1187 aa17.99■□□□□ 0.47
CCDC90B-202ENST00000455220 SERPINC1P01008 464 aa17.99■□□□□ 0.47
CCDC90B-202ENST00000455220 ACRP10323 421 aa17.99■□□□□ 0.47
CCDC90B-202ENST00000455220 PRKCSHP14314 528 aaPredicted RBP17.99■□□□□ 0.47
CCDC90B-202ENST00000455220 KCNH2Q12809 1159 aa17.99■□□□□ 0.47
CCDC90B-202ENST00000455220 VWA3BQ502W6 1294 aa17.99■□□□□ 0.47
CCDC90B-202ENST00000455220 TCERG1LQ5VWI1 586 aa17.99■□□□□ 0.47
CCDC90B-202ENST00000455220 WDR49Q8IV35 697 aa17.99■□□□□ 0.47
CCDC90B-202ENST00000455220 LPPQ93052 612 aa17.99■□□□□ 0.47
CCDC90B-202ENST00000455220 FNBP1Q96RU3 617 aa17.99■□□□□ 0.47
CCDC90B-202ENST00000455220 STX10O60499 249 aa17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 DLATP10515 647 aaKnown RBP17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 ACTN1P12814 892 aa17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 KCNE1P15382 129 aa17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 GTF2H1P32780 548 aa17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 PPP3CAQ08209 521 aa17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 NT5DC4Q86YG4 428 aa17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 EFCAB13Q8IY85 973 aa17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 TSPAN18Q96SJ8 248 aa17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 POP1Q99575 1024 aaKnown RBP17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 VPS16Q9H269 839 aa17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 CXCL16Q9H2A7 254 aa17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 NDST4Q9H3R1 872 aa17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 RSAD1Q9HA92 442 aa17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 RNF216Q9NWF9 866 aaPredicted RBP17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 DERAQ9Y315 318 aa17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 C2CD2Q9Y426 696 aa17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 NR2E3Q9Y5X4 410 aa17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 PTPRJQ12913 1337 aa17.98■□□□□ 0.47
CCDC90B-202ENST00000455220 LGALS16A8MUM7 142 aa17.97■□□□□ 0.47
CCDC90B-202ENST00000455220 PMM2O15305 246 aa17.97■□□□□ 0.47
CCDC90B-202ENST00000455220 AFPP02771 609 aaKnown RBP17.97■□□□□ 0.47
CCDC90B-202ENST00000455220 TPM2P07951 284 aa17.97■□□□□ 0.47
CCDC90B-202ENST00000455220 MRE11P49959 708 aa17.97■□□□□ 0.47
CCDC90B-202ENST00000455220 EPHB4P54760 987 aa17.97■□□□□ 0.47
CCDC90B-202ENST00000455220 PSRC1Q6PGN9 363 aaPredicted RBP17.97■□□□□ 0.47
CCDC90B-202ENST00000455220 NPAS4Q8IUM7 802 aa17.97■□□□□ 0.47
CCDC90B-202ENST00000455220 GSTCDQ8NEC7 633 aa17.97■□□□□ 0.47
CCDC90B-202ENST00000455220 FAM212AQ96EL1 285 aa17.97■□□□□ 0.47
CCDC90B-202ENST00000455220 ZMAT2Q96NC0 199 aaKnown RBP17.97■□□□□ 0.47
CCDC90B-202ENST00000455220 NAP1L5Q96NT1 182 aaPredicted RBP17.97■□□□□ 0.47
CCDC90B-202ENST00000455220 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
CCDC90B-202ENST00000455220 RNF19AQ9NV58 838 aa17.97■□□□□ 0.47
CCDC90B-202ENST00000455220 KLK14Q9P0G3 267 aa17.97■□□□□ 0.47
CCDC90B-202ENST00000455220 NFICP08651 508 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 TNNI1P19237 187 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 MLH1P40692 756 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 FMO5P49326 533 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 AP3M2P53677 418 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 UBASH3AP57075 661 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 NR1I3Q14994 352 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 FILIP1LQ4L180 1135 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 TMEM240Q5SV17 173 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 JADE1Q6IE81 842 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.96■□□□□ 0.471e-8■■■■■ 31.8
CCDC90B-202ENST00000455220 C15orf39Q6ZRI6 1047 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms