RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 KRT31Q15323 416 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 CCDC40Q4G0X9 1142 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 C1orf220Q5T0J3 134 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 PSRC1Q6PGN9 363 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-206ENST00000454852 C16orf59Q7L2K0 433 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 DEFB128Q7Z7B8 93 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 WDR49Q8IV35 697 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 PLEKHO2Q8TD55 490 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 BADQ92934 168 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 EEF2KMTQ96G04 330 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 SNX27Q96L92 541 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 TUBGCP2Q9BSJ2 902 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 SNTG2Q9NY99 539 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 CITO14578 2027 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 PDCD11Q14690 1871 aaKnown RBP12.21□□□□□ -0.45
TRAF4-206ENST00000454852 A0A1B0GTH6 734 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 P4HA2O15460 535 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 STX10O60499 249 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 RECQL4O94761 1208 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 CXCL8P10145 99 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 HARSP12081 509 aaKnown RBP12.21□□□□□ -0.45
TRAF4-206ENST00000454852 ACTN1P12814 892 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 ITGA4P13612 1032 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 CDK11BP21127 795 aaKnown RBP12.21□□□□□ -0.45
TRAF4-206ENST00000454852 GSE1Q14687 1217 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 ZBTB6Q15916 424 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 SEZ6Q53EL9 994 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 MIIPQ5JXC2 388 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 AGMOQ6ZNB7 445 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 C15orf39Q6ZRI6 1047 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 TMEM192Q8IY95 271 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 RDH13Q8NBN7 331 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 GSTCDQ8NEC7 633 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 CGRRF1Q99675 332 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 RNF39Q9H2S5 420 aa12.21□□□□□ -0.45
TRAF4-206ENST00000454852 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRAF4-206ENST00000454852 GTPBP10A4D1E9 387 aaKnown RBP12.2□□□□□ -0.46
TRAF4-206ENST00000454852 GOLGA6L3A6NEY3 463 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 LRRIQ3A6PVS8 624 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-206ENST00000454852 LACTBL1A8MY62 500 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 HOXA2O43364 376 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 N4BP1O75113 896 aaKnown RBP12.2□□□□□ -0.46
TRAF4-206ENST00000454852 CYP3A5P20815 502 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 MTIF2P46199 727 aaKnown RBP12.2□□□□□ -0.46
TRAF4-206ENST00000454852 COPB1P53618 953 aaKnown RBP12.2□□□□□ -0.46
TRAF4-206ENST00000454852 WNT7BP56706 349 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 FANCCQ00597 558 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 VWA3BQ502W6 1294 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 RASIP1Q5U651 963 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 NPAS4Q8IUM7 802 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 DPF3Q92784 378 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 FNBP1Q96RU3 617 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 RSAD1Q9HA92 442 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 PDE11AQ9HCR9 933 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 RNF19AQ9NV58 838 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 INTS13Q9NVM9 706 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 COQ4Q9Y3A0 265 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 HES2Q9Y543 173 aa12.2□□□□□ -0.46
TRAF4-206ENST00000454852 COL4A6Q14031 1691 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 MEIS3P2A8K0S8 358 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 LGALS16A8MUM7 142 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 OFD1O75665 1012 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 FGBP02675 491 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 AFPP02771 609 aaKnown RBP12.19□□□□□ -0.46
TRAF4-206ENST00000454852 C4BPAP04003 597 aaKnown RBP12.19□□□□□ -0.46
TRAF4-206ENST00000454852 AKAP5P24588 427 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 OSTNP61366 133 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 WDR5P61964 334 aaKnown RBP12.19□□□□□ -0.46
TRAF4-206ENST00000454852 DLG4P78352 724 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 PPP3CAQ08209 521 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 KCNH2Q12809 1159 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 NR1I3Q14994 352 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 NAB2Q15742 525 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 ZACNQ401N2 412 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 HSP90AA4PQ58FG1 418 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 TMEM240Q5SV17 173 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 SMYD5Q6GMV2 418 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 EFCAB13Q8IY85 973 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 HERVK_113Q902F9 699 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 TOP1MTQ969P6 601 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 CCDC127Q96BQ5 260 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 PPP1R10Q96QC0 940 aaKnown RBP12.19□□□□□ -0.46
TRAF4-206ENST00000454852 LBHD1Q9BQE6 289 aaPredicted RBP12.19□□□□□ -0.46
TRAF4-206ENST00000454852 NDST4Q9H3R1 872 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 GRPEL1Q9HAV7 217 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 RC3H2Q9HBD1 1191 aaKnown RBP12.19□□□□□ -0.46
TRAF4-206ENST00000454852 TMEM8AQ9HCN3 771 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 RTN4Q9NQC3 1192 aaKnown RBP12.19□□□□□ -0.46
TRAF4-206ENST00000454852 PARP2Q9UGN5 583 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 PCDHB7Q9Y5E2 793 aa12.19□□□□□ -0.46
TRAF4-206ENST00000454852 PTPRJQ12913 1337 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 SMIM28A0A1B0GU29 152 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 ARL5CA6NH57 179 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 PTGESO14684 152 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 XPOTO43592 962 aaKnown RBP12.18□□□□□ -0.46
TRAF4-206ENST00000454852 AMHP03971 560 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 TPM2P07951 284 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 FMO5P49326 533 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 MRE11P49959 708 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 EPHB4P54760 987 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms