RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 ELAC1Q9H777 363 aaKnown RBP16.41■□□□□ 0.22
CCNE1-203ENST00000444983 RPF1Q9H9Y2 349 aaKnown RBP16.41■□□□□ 0.22
CCNE1-203ENST00000444983 PDE11AQ9HCR9 933 aa16.41■□□□□ 0.22
CCNE1-203ENST00000444983 ABHD14A-ACY1A0A1B0GW23 586 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 LRRIQ3A6PVS8 624 aaPredicted RBP16.4■□□□□ 0.22
CCNE1-203ENST00000444983 LACTBL1A8MY62 500 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 INPPL1O15357 1258 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 IL18RAPO95256 599 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 SYN1P17600 705 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 FANCCQ00597 558 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 FPGSQ05932 587 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 PPP2R3AQ06190 1150 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 IKBKEQ14164 716 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 CD302Q8IX05 232 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 ZNF516Q92618 1163 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 SNX27Q96L92 541 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 NAP1L5Q96NT1 182 aaPredicted RBP16.4■□□□□ 0.22
CCNE1-203ENST00000444983 POP1Q99575 1024 aaKnown RBP16.4■□□□□ 0.22
CCNE1-203ENST00000444983 GRPEL1Q9HAV7 217 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 CNTN3Q9P232 1028 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 PTPRJQ12913 1337 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 A0A1B0GTH6 734 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 KRT13P13646 458 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 MTIF2P46199 727 aaKnown RBP16.4■□□□□ 0.22
CCNE1-203ENST00000444983 COPB1P53618 953 aaKnown RBP16.4■□□□□ 0.22
CCNE1-203ENST00000444983 EPHB4P54760 987 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 PPP3CAQ08209 521 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 PPIGQ13427 754 aaKnown RBP eCLIP16.4■□□□□ 0.222e-6■□□□□ 10.6
CCNE1-203ENST00000444983 SURF1Q15526 300 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 ZBTB6Q15916 424 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 VWA3BQ502W6 1294 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 C15orf39Q6ZRI6 1047 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 CREBRFQ8IUR6 639 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 LPPQ93052 612 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 CCDC127Q96BQ5 260 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 NDST4Q9H3R1 872 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 TOPORSQ9NS56 1045 aaPredicted RBP16.4■□□□□ 0.22
CCNE1-203ENST00000444983 TMEM161AQ9NX61 479 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 GIT1Q9Y2X7 761 aa16.4■□□□□ 0.22
CCNE1-203ENST00000444983 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.4■□□□□ 0.22
CCNE1-203ENST00000444983 PMM2O15305 246 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 TRIM49P0CI25 452 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 TRIM49CP0CI26 452 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 ACRP10323 421 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 ITGA4P13612 1032 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 KCNE1P15382 129 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 KCNH2Q12809 1159 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 NR1I3Q14994 352 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 WDR49Q8IV35 697 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 EFCAB13Q8IY85 973 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 ANKRD20A12PQ8NF67 263 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 PGBD4Q96DM1 585 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 ZMAT2Q96NC0 199 aaKnown RBP16.39■□□□□ 0.21
CCNE1-203ENST00000444983 TSPAN18Q96SJ8 248 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 CGRRF1Q99675 332 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 RTN4Q9NQC3 1192 aaKnown RBP16.39■□□□□ 0.21
CCNE1-203ENST00000444983 RNF19AQ9NV58 838 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 INTS13Q9NVM9 706 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 TAB2Q9NYJ8 693 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 ZMYND8Q9ULU4 1186 aaPredicted RBP16.39■□□□□ 0.21
CCNE1-203ENST00000444983 C2CD2Q9Y426 696 aa16.39■□□□□ 0.21
CCNE1-203ENST00000444983 CEP290O15078 2479 aa16.38■□□□□ 0.21
CCNE1-203ENST00000444983 PTGESO14684 152 aa16.38■□□□□ 0.21
CCNE1-203ENST00000444983 BAIAP3O94812 1187 aa16.38■□□□□ 0.21
CCNE1-203ENST00000444983 PRKCSHP14314 528 aaPredicted RBP16.38■□□□□ 0.21
CCNE1-203ENST00000444983 GTF2H1P32780 548 aa16.38■□□□□ 0.21
CCNE1-203ENST00000444983 AFF1P51825 1210 aaKnown RBP16.38■□□□□ 0.21
CCNE1-203ENST00000444983 YARSP54577 528 aaKnown RBP16.38■□□□□ 0.21
CCNE1-203ENST00000444983 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCNE1-203ENST00000444983 USP37Q86T82 979 aa16.38■□□□□ 0.21
CCNE1-203ENST00000444983 NT5DC4Q86YG4 428 aa16.38■□□□□ 0.21
CCNE1-203ENST00000444983 HACE1Q8IYU2 909 aa16.38■□□□□ 0.21
CCNE1-203ENST00000444983 APOL6Q9BWW8 343 aa16.38■□□□□ 0.21
CCNE1-203ENST00000444983 VPS16Q9H269 839 aa16.38■□□□□ 0.21
CCNE1-203ENST00000444983 UBN1Q9NPG3 1134 aa16.38■□□□□ 0.21
CCNE1-203ENST00000444983 PARP2Q9UGN5 583 aa16.38■□□□□ 0.21
CCNE1-203ENST00000444983 SMIM28A0A1B0GU29 152 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 LGALS16A8MUM7 142 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 EFCAB14O75071 495 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 OFD1O75665 1012 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 SERPINC1P01008 464 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 C4BPAP04003 597 aaKnown RBP16.37■□□□□ 0.21
CCNE1-203ENST00000444983 DLATP10515 647 aaKnown RBP16.37■□□□□ 0.21
CCNE1-203ENST00000444983 RGS19P49795 217 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 NAB2Q15742 525 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 CBWD6Q4V339 395 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 DCAF17Q5H9S7 520 aaPredicted RBP16.37■□□□□ 0.21
CCNE1-203ENST00000444983 CBWD3Q5JTY5 395 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 CBWD5Q5RIA9 395 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 TMEM240Q5SV17 173 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 JADE1Q6IE81 842 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 ZNF365Q70YC5 407 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 OR5B17Q8NGF7 314 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 CXorf38Q8TB03 319 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 ZFP42Q96MM3 310 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 FNBP1Q96RU3 617 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 TMEM117Q9H0C3 514 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 RSAD1Q9HA92 442 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 KLK14Q9P0G3 267 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 DERAQ9Y315 318 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms