RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.32□□□□□ -0.6
CALD1-210ENST00000443197 ANKRD42Q8N9B4 389 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 C17orf75Q9HAS0 396 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 GBA2Q9HCG7 927 aaPredicted RBP11.32□□□□□ -0.6
CALD1-210ENST00000443197 NWD2Q9ULI1 1742 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 CXCL11O14625 94 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 RGS16O15492 202 aaPredicted RBP11.31□□□□□ -0.6
CALD1-210ENST00000443197 TTI1O43156 1089 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 HBP1O60381 514 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 RFX1P22670 979 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 PSMA2P25787 234 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 SPIRE1Q08AE8 756 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 HSPH1Q92598 858 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 FMO2Q99518 471 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 SNX25Q9H3E2 840 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 MED4Q9NPJ6 270 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 PHF20L1A8MW92 1017 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 FGFR4P22455 802 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 KCNJ1P48048 391 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 CARSP49589 748 aaKnown RBP11.31□□□□□ -0.6
CALD1-210ENST00000443197 CDK17Q00537 523 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 PPP2R5EQ16537 467 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 GLRA4Q5JXX5 417 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 RFX6Q8HWS3 928 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 TPCN2Q8NHX9 752 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 MAIP1Q8WWC4 291 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 TRIM51Q9BSJ1 452 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 AIPL1Q9NZN9 384 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 PIN4Q9Y237 131 aaKnown RBP11.31□□□□□ -0.6
CALD1-210ENST00000443197 INPP5FQ9Y2H2 1132 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 FZD9O00144 591 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 DDX3XO00571 662 aaKnown RBP eCLIP11.31□□□□□ -0.6
CALD1-210ENST00000443197 ATP8B1O43520 1251 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 PLA2G6O60733 806 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 TBXAS1P24557 533 aaPredicted RBP11.31□□□□□ -0.6
CALD1-210ENST00000443197 ADORA2AP29274 412 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 KIF22Q14807 665 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 CLUL1Q15846 466 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 HP1BP3Q5SSJ5 553 aaPredicted RBP11.31□□□□□ -0.6
CALD1-210ENST00000443197 PHLDB3Q6NSJ2 640 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 PARD3BQ8TEW8 1205 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 ZBTB10Q96DT7 871 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 MIS12Q9H081 205 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 BTBD7Q9P203 1132 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 TTC7AQ9ULT0 858 aaPredicted RBP11.31□□□□□ -0.6
CALD1-210ENST00000443197 SNX9Q9Y5X1 595 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 MYH6P13533 1939 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 COL4A1P02462 1669 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 A0A087WZ62 844 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 H7C0C1 242 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 CCDC188H7C350 402 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 M0QYV0 167 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 ADRB2P07550 413 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 INSRRP14616 1297 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 NAMPTP43490 491 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 ATP5OP48047 213 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 PSMC1P62191 440 aaKnown RBP11.31□□□□□ -0.6
CALD1-210ENST00000443197 CYP24A1Q07973 514 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 MTMR3Q13615 1198 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 CPB2Q96IY4 423 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 PARK7Q99497 189 aaKnown RBP11.31□□□□□ -0.6
CALD1-210ENST00000443197 FDXACB1Q9BRP7 624 aaPredicted RBP11.31□□□□□ -0.6
CALD1-210ENST00000443197 ADAM21Q9UKJ8 722 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 CCDC88AQ3V6T2 1871 aa11.31□□□□□ -0.6
CALD1-210ENST00000443197 CACNA1SQ13698 1873 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 MIF4GDA9UHW6 222 aaKnown RBP11.3□□□□□ -0.6
CALD1-210ENST00000443197 MED7O43513 233 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 KRT15P19012 456 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 ADCYAP1R1P41586 468 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 ERVK-9P63128 1117 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 HSDL1Q3SXM5 330 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 PPP6R3Q5H9R7 873 aaPredicted RBP11.3□□□□□ -0.6
CALD1-210ENST00000443197 ARMCX2Q7L311 632 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 HACE1Q8IYU2 909 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 TMEM161BQ8NDZ6 487 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 ZSWIM2Q8NEG5 633 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 MROH8Q9H579 483 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 PDGFCQ9NRA1 345 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 TBK1Q9UHD2 729 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 ZNF214Q9UL59 606 aaPredicted RBP11.3□□□□□ -0.6
CALD1-210ENST00000443197 ZNF536O15090 1300 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 ACSL3O95573 720 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 CYP11B1P15538 503 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 BRD2P25440 801 aaKnown RBP11.3□□□□□ -0.6
CALD1-210ENST00000443197 GTF2H1P32780 548 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 LAMTOR4Q0VGL1 99 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 CASC4Q6P4E1 433 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 SAMD3Q8N6K7 520 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 KCTD6Q8NC69 237 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 ASAP3Q8TDY4 903 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 HDAC7Q8WUI4 952 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 TEPSINQ96N21 525 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 ACAP3Q96P50 834 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 INPP4AQ96PE3 977 aaPredicted RBP11.3□□□□□ -0.6
CALD1-210ENST00000443197 IQCGQ9H095 443 aaKnown RBP11.3□□□□□ -0.6
CALD1-210ENST00000443197 FAM114A2Q9NRY5 505 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 TAS2R14Q9NYV8 317 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 PCDHB2Q9Y5E7 798 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 LAMA4Q16363 1823 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 COL22A1Q8NFW1 1626 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms