RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 EIF3FO00303 357 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 ACKR2O00590 384 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 ENDOD1O94919 500 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 ZBTB7AO95365 584 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 CD8BP10966 210 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 EN2P19622 333 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 FSTP19883 344 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 TRHRP34981 398 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 ARL4AP40617 200 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 ITGA8P53708 1063 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 TLE1Q04724 770 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 NFATC3Q12968 1075 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 CR1LQ2VPA4 569 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 MIB1Q86YT6 1006 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 FAM126BQ8IXS8 530 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 PPP1R14CQ8TAE6 165 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 IFI44Q8TCB0 444 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 SHISA4Q96DD7 197 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 TSPAN18Q96SJ8 248 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 P2RX7Q99572 595 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 PDCD2LQ9BRP1 358 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 OBP2BQ9NPH6 170 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 MYO1AQ9UBC5 1043 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 FEZ2Q9UHY8 353 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 GPR160Q9UJ42 338 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 CRYL1Q9Y2S2 319 aa4.8□□□□□ -1.64
CDC42BPA-207ENST00000441725 N4BP3O15049 544 aa4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 NPC1O15118 1278 aa4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 GSC2O15499 205 aa4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 DHX16O60231 1041 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 MBD4O95243 580 aa4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 CNOT4O95628 575 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 RPS16P62249 146 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 G3BP1Q13283 466 aaKnown RBP eCLIP4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 CNGB1Q14028 1251 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 ZKSCAN2Q63HK3 967 aa4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 JMJD6Q6NYC1 403 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 FAM180AQ6UWF9 173 aa4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 C1orf122Q6ZSJ8 110 aa4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 RSPH3Q86UC2 560 aa4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 WFDC3Q8IUB2 231 aa4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 ZGPATQ8N5A5 531 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 GIMAP8Q8ND71 665 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 MUL1Q969V5 352 aa4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 DYDC2Q96IM9 177 aa4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 PAWRQ96IZ0 340 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 SARS2Q9NP81 518 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 SMC4Q9NTJ3 1288 aa4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 PIH1D1Q9NWS0 290 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 DACT1Q9NYF0 836 aa4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 GGA3Q9NZ52 723 aa4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 AFF4Q9UHB7 1163 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-207ENST00000441725 A0A1W2PR48 441 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 GOLGA6L3A6NEY3 463 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 NT5C1B-RDH14C9J2C7 533 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 TRIM38O00635 465 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 ARHGAP6O43182 974 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 TIMM44O43615 452 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 ARIH2O95376 493 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 LY86O95711 162 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 AHSGP02765 367 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 AMY1AP04745 511 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 CALRP27797 417 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 ECHS1P30084 290 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 RXRGP48443 463 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 FLT3LGP49771 235 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 PRR5P85299 388 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 CD83Q01151 205 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 GRM1Q13255 1194 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 DGKDQ16760 1214 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 SKIDA1Q1XH10 827 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 MST1LQ2TV78 715 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 FLYWCH1Q4VC44 716 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 PHF19Q5T6S3 580 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 VASNQ6EMK4 673 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 FAM180BQ6P0A1 224 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 TMC5Q6UXY8 1006 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 SPRED2Q7Z698 418 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 PDILTQ8N807 584 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 C1orf131Q8NDD1 294 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 MAML1Q92585 1016 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 MISP3Q96FF7 219 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 MYBBP1AQ9BQG0 1328 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 C19orf73Q9NVV2 129 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 DNAI1Q9UI46 699 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 SLC39A10Q9ULF5 831 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 PLA2G2DQ9UNK4 145 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 CECR2Q9BXF3 1484 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 NUDT19A8MXV4 375 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 PRAMEF4O60810 478 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 IL18BPO95998 194 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 PNLIPP16233 465 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 ARFIP2P53365 341 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 RAB39AQ14964 217 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 STILQ15468 1287 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 MSMPQ1L6U9 139 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 ZMYM1Q5SVZ6 1142 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 ETV3LQ6ZN32 361 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 ZNF574Q6ZN55 896 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 RFX8Q6ZV50 586 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms