RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ADCY5O95622 1261 aa22.45■■□□□ 1.18
CHD3-204ENST00000439235 DLATP10515 647 aaKnown RBP22.45■■□□□ 1.18
CHD3-204ENST00000439235 GTF2H1P32780 548 aa22.45■■□□□ 1.18
CHD3-204ENST00000439235 PRPF38BQ5VTL8 546 aaKnown RBP22.45■■□□□ 1.18
CHD3-204ENST00000439235 MFSD5Q6N075 450 aa22.45■■□□□ 1.18
CHD3-204ENST00000439235 WDR49Q8IV35 697 aa22.45■■□□□ 1.18
CHD3-204ENST00000439235 PGBD4Q96DM1 585 aa22.45■■□□□ 1.18
CHD3-204ENST00000439235 FAM212AQ96EL1 285 aa22.45■■□□□ 1.18
CHD3-204ENST00000439235 APOL6Q9BWW8 343 aa22.45■■□□□ 1.18
CHD3-204ENST00000439235 TSPYL2Q9H2G4 693 aaPredicted RBP22.45■■□□□ 1.18
CHD3-204ENST00000439235 HES2Q9Y543 173 aa22.45■■□□□ 1.18
CHD3-204ENST00000439235 ZNF623O75123 536 aa22.44■■□□□ 1.18
CHD3-204ENST00000439235 RECQL4O94761 1208 aa22.44■■□□□ 1.18
CHD3-204ENST00000439235 PFKMP08237 780 aa22.44■■□□□ 1.18
CHD3-204ENST00000439235 ITGA4P13612 1032 aa22.44■■□□□ 1.18
CHD3-204ENST00000439235 TNNI1P19237 187 aa22.44■■□□□ 1.18
CHD3-204ENST00000439235 AP3M2P53677 418 aa22.44■■□□□ 1.18
CHD3-204ENST00000439235 DLG4P78352 724 aa22.44■■□□□ 1.18
CHD3-204ENST00000439235 CLDN10P78369 228 aa22.44■■□□□ 1.18
CHD3-204ENST00000439235 UBXN1Q04323 297 aa22.44■■□□□ 1.18
CHD3-204ENST00000439235 NR1I3Q14994 352 aa22.44■■□□□ 1.18
CHD3-204ENST00000439235 CNKSR3Q6P9H4 555 aa22.44■■□□□ 1.18
CHD3-204ENST00000439235 SLC24A5Q71RS6 500 aa22.44■■□□□ 1.18
CHD3-204ENST00000439235 DEFB128Q7Z7B8 93 aa22.44■■□□□ 1.18
CHD3-204ENST00000439235 MRPL10Q7Z7H8 261 aaKnown RBP22.44■■□□□ 1.18
CHD3-204ENST00000439235 C7orf61Q8IZ16 206 aa22.44■■□□□ 1.18
CHD3-204ENST00000439235 SNX27Q96L92 541 aa22.44■■□□□ 1.18
CHD3-204ENST00000439235 PARP2Q9UGN5 583 aa22.44■■□□□ 1.18
CHD3-204ENST00000439235 TTC26A0AVF1 554 aa22.43■■□□□ 1.18
CHD3-204ENST00000439235 P4HA2O15460 535 aa22.43■■□□□ 1.18
CHD3-204ENST00000439235 FMO5P49326 533 aa22.43■■□□□ 1.18
CHD3-204ENST00000439235 MXI1P50539 228 aa22.43■■□□□ 1.18
CHD3-204ENST00000439235 MYL7Q01449 175 aa22.43■■□□□ 1.18
CHD3-204ENST00000439235 SLC10A6Q3KNW5 377 aa22.43■■□□□ 1.18
CHD3-204ENST00000439235 ECHDC2Q86YB7 292 aa22.43■■□□□ 1.18
CHD3-204ENST00000439235 NT5DC4Q86YG4 428 aa22.43■■□□□ 1.18
CHD3-204ENST00000439235 LINC01599Q8WXQ3 324 aa22.43■■□□□ 1.18
CHD3-204ENST00000439235 TSPAN18Q96SJ8 248 aa22.43■■□□□ 1.18
CHD3-204ENST00000439235 TMEM8AQ9HCN3 771 aa22.43■■□□□ 1.18
CHD3-204ENST00000439235 UBN1Q9NPG3 1134 aa22.43■■□□□ 1.18
CHD3-204ENST00000439235 INTS13Q9NVM9 706 aa22.43■■□□□ 1.18
CHD3-204ENST00000439235 RNF216Q9NWF9 866 aaPredicted RBP22.43■■□□□ 1.18
CHD3-204ENST00000439235 LACTBL1A8MY62 500 aa22.42■■□□□ 1.18
CHD3-204ENST00000439235 C9IYK1 514 aa22.42■■□□□ 1.18
CHD3-204ENST00000439235 EVI5O60447 810 aa22.42■■□□□ 1.18
CHD3-204ENST00000439235 WNT7BP56706 349 aa22.42■■□□□ 1.18
CHD3-204ENST00000439235 CETN1Q12798 172 aa22.42■■□□□ 1.18
CHD3-204ENST00000439235 C1orf220Q5T0J3 134 aa22.42■■□□□ 1.18
CHD3-204ENST00000439235 RPUSD2Q8IZ73 545 aaKnown RBP22.42■■□□□ 1.18
CHD3-204ENST00000439235 MMRN2Q9H8L6 949 aa22.42■■□□□ 1.18
CHD3-204ENST00000439235 GIT1Q9Y2X7 761 aa22.42■■□□□ 1.18
CHD3-204ENST00000439235 DERAQ9Y315 318 aa22.42■■□□□ 1.18
CHD3-204ENST00000439235 A0A1W2PQC6 194 aa22.41■■□□□ 1.18
CHD3-204ENST00000439235 GTPBP10A4D1E9 387 aaKnown RBP22.41■■□□□ 1.18
CHD3-204ENST00000439235 PMM2O15305 246 aa22.41■■□□□ 1.18
CHD3-204ENST00000439235 TEX33O43247 280 aa22.41■■□□□ 1.18
CHD3-204ENST00000439235 TMEM191BP0C7N4 346 aa22.41■■□□□ 1.18
CHD3-204ENST00000439235 AKAP5P24588 427 aa22.41■■□□□ 1.18
CHD3-204ENST00000439235 ITGB8P26012 769 aa22.41■■□□□ 1.18
CHD3-204ENST00000439235 CDC25BP30305 580 aa22.41■■□□□ 1.18
CHD3-204ENST00000439235 GCLMP48507 274 aa22.41■■□□□ 1.18
CHD3-204ENST00000439235 PPP3CAQ08209 521 aa22.41■■□□□ 1.18
CHD3-204ENST00000439235 KRT39Q6A163 491 aa22.41■■□□□ 1.18
CHD3-204ENST00000439235 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.41■■□□□ 1.18
CHD3-204ENST00000439235 ANKRD36BP1Q96IX9 119 aa22.41■■□□□ 1.18
CHD3-204ENST00000439235 POP1Q99575 1024 aaKnown RBP22.41■■□□□ 1.18
CHD3-204ENST00000439235 CNTN3Q9P232 1028 aa22.41■■□□□ 1.18
CHD3-204ENST00000439235 C2CD2Q9Y426 696 aa22.41■■□□□ 1.18
CHD3-204ENST00000439235 EOMESO95936 686 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 TNNC2P02585 160 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 CSF2RAP15509 400 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 FAM189BP81408 668 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 TFAMQ00059 246 aaKnown RBP22.4■■□□□ 1.18
CHD3-204ENST00000439235 PPIGQ13427 754 aaKnown RBP eCLIP22.4■■□□□ 1.184e-6■■□□□ 13.5
CHD3-204ENST00000439235 IKBKEQ14164 716 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 TMEM132DQ14C87 1099 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 DUOXA2Q1HG44 320 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 CBWD6Q4V339 395 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 CBWD3Q5JTY5 395 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 CBWD5Q5RIA9 395 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 GBP6Q6ZN66 633 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 RTN4RL1Q86UN2 441 aaPredicted RBP22.4■■□□□ 1.18
CHD3-204ENST00000439235 RNF169Q8NCN4 708 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 CACTINQ8WUQ7 758 aaKnown RBP22.4■■□□□ 1.18
CHD3-204ENST00000439235 ERGIC2Q96RQ1 377 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 RPS6KC1Q96S38 1066 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 TMEM117Q9H0C3 514 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 RNF39Q9H2S5 420 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 ELAC1Q9H777 363 aaKnown RBP22.4■■□□□ 1.18
CHD3-204ENST00000439235 RALGAPA2Q2PPJ7 1873 aa22.4■■□□□ 1.18
CHD3-204ENST00000439235 PTPRJQ12913 1337 aa22.39■■□□□ 1.18
CHD3-204ENST00000439235 ENPP3O14638 875 aa22.39■■□□□ 1.17
CHD3-204ENST00000439235 MEFVO15553 781 aaPredicted RBP22.39■■□□□ 1.17
CHD3-204ENST00000439235 XPOTO43592 962 aaKnown RBP22.39■■□□□ 1.17
CHD3-204ENST00000439235 EFCAB14O75071 495 aa22.39■■□□□ 1.17
CHD3-204ENST00000439235 NFICP08651 508 aa22.39■■□□□ 1.17
CHD3-204ENST00000439235 ATF7P17544 494 aaPredicted RBP22.39■■□□□ 1.17
CHD3-204ENST00000439235 XKR4Q5GH76 650 aa22.39■■□□□ 1.17
CHD3-204ENST00000439235 LMBRD2Q68DH5 695 aaPredicted RBP22.39■■□□□ 1.17
CHD3-204ENST00000439235 JADE1Q6IE81 842 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms