RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 VTI1AQ96AJ9 217 aa11.44□□□□□ -0.58
NEFM-202ENST00000433454 CPB2Q96IY4 423 aa11.44□□□□□ -0.58
NEFM-202ENST00000433454 OSMRQ99650 979 aa11.44□□□□□ -0.58
NEFM-202ENST00000433454 ADPGKQ9BRR6 497 aa11.44□□□□□ -0.58
NEFM-202ENST00000433454 PTPRJQ12913 1337 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 INHAP05111 366 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 DARSP14868 501 aaKnown RBP11.43□□□□□ -0.58
NEFM-202ENST00000433454 FERP16591 822 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 AP3M2P53677 418 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 DRAP1Q14919 205 aaPredicted RBP11.43□□□□□ -0.58
NEFM-202ENST00000433454 KCNA10Q16322 511 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 FAM47CQ5HY64 1035 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 CATSPER4Q7RTX7 472 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 APBB1IPQ7Z5R6 666 aaPredicted RBP11.43□□□□□ -0.58
NEFM-202ENST00000433454 RNF180Q86T96 592 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 ZNF516Q92618 1163 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 SEMA4DQ92854 862 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 NT5C1BQ96P26 610 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 UBE2TQ9NPD8 197 aaPredicted RBP11.43□□□□□ -0.58
NEFM-202ENST00000433454 A0A1B0GUA9 196 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 ZC3H11AO75152 810 aaKnown RBP eCLIP11.43□□□□□ -0.58
NEFM-202ENST00000433454 TUBB4AP04350 444 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 EIF4BP23588 611 aaKnown RBP11.43□□□□□ -0.58
NEFM-202ENST00000433454 SOX5P35711 763 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 PRKCIP41743 596 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 PIK3CAP42336 1068 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 ENOX2Q16206 610 aaKnown RBP11.43□□□□□ -0.58
NEFM-202ENST00000433454 ARHGAP29Q52LW3 1261 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 TDRD10Q5VZ19 366 aaKnown RBP11.43□□□□□ -0.58
NEFM-202ENST00000433454 CCSAPQ6IQ19 270 aaPredicted RBP11.43□□□□□ -0.58
NEFM-202ENST00000433454 IRF2BP2Q7Z5L9 587 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 ARHGEF19Q8IW93 802 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 PPM1KQ8N3J5 372 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 CEP120Q8N960 986 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 BEGAINQ9BUH8 593 aa11.43□□□□□ -0.58
NEFM-202ENST00000433454 REXO2Q9Y3B8 237 aaKnown RBP11.43□□□□□ -0.58
NEFM-202ENST00000433454 LRRN2O75325 713 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 C4BPAP04003 597 aaKnown RBP11.42□□□□□ -0.58
NEFM-202ENST00000433454 CLTAP09496 248 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 CCDC172P0C7W6 258 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 GRK4P32298 578 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 OSTNP61366 133 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 ARHGAP44Q17R89 818 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 DCAF4L1Q3SXM0 396 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 FAM212AQ96EL1 285 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 GPR88Q9GZN0 384 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 HAUS4Q9H6D7 363 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 RPF1Q9H9Y2 349 aaKnown RBP11.42□□□□□ -0.58
NEFM-202ENST00000433454 LZTFL1Q9NQ48 299 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 C1orf112Q9NSG2 853 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 EVI5O60447 810 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 GFPT2O94808 682 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 IL18RAPO95256 599 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 LCA5LO95447 670 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 RPLP2P05387 115 aaKnown RBP11.42□□□□□ -0.58
NEFM-202ENST00000433454 STAG3L1P0CL83 205 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 FGFR4P22455 802 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 ANXA13P27216 316 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 CRYBB1P53674 252 aaPredicted RBP11.42□□□□□ -0.58
NEFM-202ENST00000433454 MFAP3P55082 362 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 POU5F1Q01860 360 aaKnown RBP11.42□□□□□ -0.58
NEFM-202ENST00000433454 SNX17Q15036 470 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 ASTE1Q2TB18 679 aaPredicted RBP11.42□□□□□ -0.58
NEFM-202ENST00000433454 WDR44Q5JSH3 913 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 GDF6Q6KF10 455 aaPredicted RBP11.42□□□□□ -0.58
NEFM-202ENST00000433454 KIAA1328Q86T90 577 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 RSPH3Q86UC2 560 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 SESTD1Q86VW0 696 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 FAM84AQ96KN4 292 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 FAM81BQ96LP2 452 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 CDHR5Q9HBB8 845 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 HMX1Q9NP08 348 aaPredicted RBP11.42□□□□□ -0.58
NEFM-202ENST00000433454 TRIM17Q9Y577 477 aa11.42□□□□□ -0.58
NEFM-202ENST00000433454 ANK1P16157 1881 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 M0QZ92 97 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 CABYRO75952 493 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 HLA-DRAP01903 254 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 PNMA6AP0CW24 399 aaPredicted RBP11.41□□□□□ -0.58
NEFM-202ENST00000433454 CXCL8P10145 99 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 CYP27A1Q02318 531 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 PTK2Q05397 1052 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 NOTUMQ6P988 496 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 VPS36Q86VN1 386 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 OR5B17Q8NGF7 314 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 IFIH1Q9BYX4 1025 aaKnown RBP11.41□□□□□ -0.58
NEFM-202ENST00000433454 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.41□□□□□ -0.58
NEFM-202ENST00000433454 B4GALT4O60513 344 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 PHACTR2O75167 634 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 HOXA11P31270 313 aaPredicted RBP11.41□□□□□ -0.58
NEFM-202ENST00000433454 ETF1P62495 437 aaKnown RBP11.41□□□□□ -0.58
NEFM-202ENST00000433454 MRPS6P82932 125 aaKnown RBP11.41□□□□□ -0.58
NEFM-202ENST00000433454 GCNT1Q02742 428 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 GFPT1Q06210 699 aaPredicted RBP11.41□□□□□ -0.58
NEFM-202ENST00000433454 DUOXA2Q1HG44 320 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 ENOSF1Q7L5Y1 443 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 SERINC5Q86VE9 423 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 TXLNBQ8N3L3 684 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 HELQQ8TDG4 1101 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 TMEM40Q8WWA1 233 aa11.41□□□□□ -0.58
NEFM-202ENST00000433454 ZNF592Q92610 1267 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms