RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 DCTN4Q9UJW0 460 aa17.49■□□□□ 0.39
RHBDF1-204ENST00000428730 EDF1O60869 148 aaKnown RBP17.49■□□□□ 0.39
RHBDF1-204ENST00000428730 GGPS1O95749 300 aa17.49■□□□□ 0.39
RHBDF1-204ENST00000428730 NEK3P51956 506 aa17.49■□□□□ 0.39
RHBDF1-204ENST00000428730 LRRC74BQ6ZQY2 392 aa17.49■□□□□ 0.39
RHBDF1-204ENST00000428730 CAPN12Q6ZSI9 719 aa17.49■□□□□ 0.39
RHBDF1-204ENST00000428730 RDH13Q8NBN7 331 aa17.49■□□□□ 0.39
RHBDF1-204ENST00000428730 WDR60Q8WVS4 1066 aa17.49■□□□□ 0.39
RHBDF1-204ENST00000428730 PRR11Q96HE9 360 aaPredicted RBP17.49■□□□□ 0.39
RHBDF1-204ENST00000428730 TRAPPC9Q96Q05 1148 aa17.49■□□□□ 0.39
RHBDF1-204ENST00000428730 WASF2Q9Y6W5 498 aa17.49■□□□□ 0.39
RHBDF1-204ENST00000428730 MROH7Q68CQ1 1323 aa17.49■□□□□ 0.39
RHBDF1-204ENST00000428730 ECE2O60344 883 aa17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 SKIP12755 728 aa17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 NLRP9Q7RTR0 991 aa17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 CCDC24Q8N4L8 307 aa17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 NEDD1Q8NHV4 660 aa17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 SNF8Q96H20 258 aa17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 PCDHB18PQ96TA0 734 aa17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 APEX2Q9UBZ4 518 aa17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 TULP1O00294 542 aaPredicted RBP17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 ETS2P15036 469 aa17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 RPA3P35244 121 aaPredicted RBP17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 CLK2P49760 499 aaKnown RBP17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 GPC5P78333 572 aa17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 OVGP1Q12889 678 aa17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 SLC1A5Q15758 541 aa17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 LRRC23Q53EV4 343 aaPredicted RBP17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 SAMD1Q6SPF0 538 aaPredicted RBP17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 OTOAQ7RTW8 1153 aa17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 LRRC19Q9H756 370 aa17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 MYO3BQ8WXR4 1341 aa17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 ZMYM2Q9UBW7 1377 aa17.48■□□□□ 0.39
RHBDF1-204ENST00000428730 EXOC3O60645 756 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 RRM1P23921 792 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 ADCY8P40145 1251 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 CRKLP46109 303 aaKnown RBP17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 CTC1Q2NKJ3 1217 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 MAML1Q92585 1016 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 GATA6Q92908 595 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 BICD1Q96G01 975 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 GBP5Q96PP8 586 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 BHMT2Q9H2M3 363 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 EURLQ9NYK6 297 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 ANAPC5Q9UJX4 755 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 SPATA31A1Q5TZJ5 1347 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 TRAFD1O14545 582 aaPredicted RBP17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 SPATA31D3P0C874 917 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 RASSF2P50749 326 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 SPATA31D4Q6ZUB0 917 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 CLNKQ7Z7G1 428 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 ANKRD35Q8N283 1001 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 ATL2Q8NHH9 583 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 KAT5Q92993 513 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 FAM210AQ96ND0 272 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 JMJD4Q9H9V9 463 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 ARL8BQ9NVJ2 186 aa17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 R3HDM2Q9Y2K5 976 aaKnown RBP17.47■□□□□ 0.39
RHBDF1-204ENST00000428730 GSTTP1A0A1W2PQM5 241 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 MAGEB2O15479 319 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 SPATA31C1P0DKV0 1188 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 ITIH2P19823 946 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 PSMC2P35998 433 aaKnown RBP17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 OCRLQ01968 901 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 KIF22Q14807 665 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 PKN2Q16513 984 aaKnown RBP17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 C12orf50Q8NA57 414 aaPredicted RBP17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 DENND1AQ8TEH3 1009 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 TIPINQ9BVW5 301 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 WNT8AQ9H1J5 351 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 TLE6Q9H808 572 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 KRT82Q9NSB4 513 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 WDR91A4D1P6 747 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 POC1B-GALNT4F8VUJ3 575 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 LDHBP07195 334 aaKnown RBP17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 ATF2P15336 505 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 GCAP28676 217 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 HADHBP55084 474 aaKnown RBP17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 MYL7Q01449 175 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 SLC30A10Q6XR72 485 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 TRIM74Q86UV6 250 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 TRIM73Q86UV7 250 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 TRABD2AQ86V40 505 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 NBPF5PQ86XG9 351 aaPredicted RBP17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 ARHGEF19Q8IW93 802 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 ADGRF4Q8IZF3 695 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 NDNQ99608 321 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 NUP85Q9BW27 656 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 C12orf65Q9H3J6 166 aaKnown RBP17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 UBE2TQ9NPD8 197 aaPredicted RBP17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 KANSL3Q9P2N6 904 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 DNM3Q9UQ16 869 aa17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.46■□□□□ 0.39
RHBDF1-204ENST00000428730 CFAP69A5D8W1 941 aa17.45■□□□□ 0.38
RHBDF1-204ENST00000428730 TCEA3O75764 348 aa17.45■□□□□ 0.38
RHBDF1-204ENST00000428730 LMNAP02545 664 aaKnown RBP17.45■□□□□ 0.38
RHBDF1-204ENST00000428730 GSTA2P09210 222 aa17.45■□□□□ 0.38
RHBDF1-204ENST00000428730 MCL1Q07820 350 aa17.45■□□□□ 0.38
RHBDF1-204ENST00000428730 SPARCL1Q14515 664 aa17.45■□□□□ 0.38
RHBDF1-204ENST00000428730 CNPY1Q3B7I2 92 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms