RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 DDIASQ8IXT1 998 aa11.72□□□□□ -0.53
TNC-203ENST00000423613 RPAP3Q9H6T3 665 aaPredicted RBP11.72□□□□□ -0.53
TNC-203ENST00000423613 ADAMTS1Q9UHI8 967 aa11.72□□□□□ -0.53
TNC-203ENST00000423613 ADGBQ8N7X0 1667 aa11.72□□□□□ -0.53
TNC-203ENST00000423613 PHF20L1A8MW92 1017 aa11.72□□□□□ -0.53
TNC-203ENST00000423613 CDK8P49336 464 aa11.72□□□□□ -0.53
TNC-203ENST00000423613 ALKBH5Q6P6C2 394 aaKnown RBP11.72□□□□□ -0.53
TNC-203ENST00000423613 QKIQ96PU8 341 aaKnown RBP eCLIP11.72□□□□□ -0.53
TNC-203ENST00000423613 MTIF3Q9H2K0 278 aaKnown RBP11.72□□□□□ -0.53
TNC-203ENST00000423613 TRPC7Q9HCX4 862 aa11.72□□□□□ -0.53
TNC-203ENST00000423613 SRP68Q9UHB9 627 aaKnown RBP11.72□□□□□ -0.53
TNC-203ENST00000423613 METP08581 1390 aa11.72□□□□□ -0.53
TNC-203ENST00000423613 RNF103O00237 685 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 ARL6IP4Q66PJ3 421 aaKnown RBP11.71□□□□□ -0.53
TNC-203ENST00000423613 C19orf60Q96EN9 201 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 WRNIP1Q96S55 665 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 MMP19Q99542 508 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 THTPAQ9BU02 230 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 FANCEQ9HB96 536 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 MRPL39Q9NYK5 338 aaKnown RBP11.71□□□□□ -0.53
TNC-203ENST00000423613 CCDC80Q76M96 950 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 ZNF786Q8N393 782 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 SEC16BQ96JE7 1060 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 FHDC1Q9C0D6 1143 aaPredicted RBP11.71□□□□□ -0.53
TNC-203ENST00000423613 AFF4Q9UHB7 1163 aaKnown RBP11.71□□□□□ -0.53
TNC-203ENST00000423613 KIF21AQ7Z4S6 1674 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 CCDC78A2IDD5 438 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 GOLGA8TH3BQL2 631 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 IGF2BP3O00425 579 aaKnown RBP eCLIP11.71□□□□□ -0.53
TNC-203ENST00000423613 CYTH3O43739 400 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 GUCY1B2O75343 617 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 CPB1P15086 417 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 ATP7BP35670 1465 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 VHLP40337 213 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 ARMCX4Q5H9R4 360 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 TTC33Q6PID6 262 aaPredicted RBP11.71□□□□□ -0.53
TNC-203ENST00000423613 AGGF1Q8N302 714 aaeCLIP11.71□□□□□ -0.53
TNC-203ENST00000423613 GJB4Q9NTQ9 266 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 ARL2BPQ9Y2Y0 163 aa11.71□□□□□ -0.53
TNC-203ENST00000423613 MDH1P40925 334 aaKnown RBP11.71□□□□□ -0.54
TNC-203ENST00000423613 USP33Q8TEY7 942 aa11.71□□□□□ -0.54
TNC-203ENST00000423613 OTUD5Q96G74 571 aa11.71□□□□□ -0.54
TNC-203ENST00000423613 MASTLQ96GX5 879 aa11.71□□□□□ -0.54
TNC-203ENST00000423613 BHMT2Q9H2M3 363 aa11.71□□□□□ -0.54
TNC-203ENST00000423613 SARS2Q9NP81 518 aaKnown RBP11.71□□□□□ -0.54
TNC-203ENST00000423613 PI4KBQ9UBF8 816 aa11.71□□□□□ -0.54
TNC-203ENST00000423613 ZNF521Q96K83 1311 aa11.71□□□□□ -0.54
TNC-203ENST00000423613 KBTBD13C9JR72 458 aa11.71□□□□□ -0.54
TNC-203ENST00000423613 ABCD1P33897 745 aa11.71□□□□□ -0.54
TNC-203ENST00000423613 KRR1Q13601 381 aaKnown RBP11.71□□□□□ -0.54
TNC-203ENST00000423613 PDIK1LQ8N165 341 aa11.71□□□□□ -0.54
TNC-203ENST00000423613 CYFIP2Q96F07 1278 aa11.71□□□□□ -0.54
TNC-203ENST00000423613 TMEM161AQ9NX61 479 aa11.71□□□□□ -0.54
TNC-203ENST00000423613 BLOC1S6Q9UL45 172 aa11.71□□□□□ -0.54
TNC-203ENST00000423613 UPP2O95045 317 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 LCA5LO95447 670 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 HSPA9P38646 679 aaKnown RBP11.7□□□□□ -0.54
TNC-203ENST00000423613 PPP4R3CPQ6ZMV5 832 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 C11orf74Q86VG3 221 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 UXS1Q8NBZ7 420 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 GMEB1Q9Y692 573 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 KIF28PB7ZC32 967 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 PRPF4O43172 522 aaKnown RBP eCLIP11.7□□□□□ -0.54
TNC-203ENST00000423613 ZBED1O96006 694 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 ENO3P13929 434 aaPredicted RBP11.7□□□□□ -0.54
TNC-203ENST00000423613 Q4G0T1 1027 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 THNSL1Q8IYQ7 743 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 REXO4Q9GZR2 422 aaKnown RBP11.7□□□□□ -0.54
TNC-203ENST00000423613 MAP10Q9P2G4 905 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 PCDHGA3Q9Y5H0 932 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 EIF3HO15372 352 aaKnown RBP eCLIP11.7□□□□□ -0.54
TNC-203ENST00000423613 CDC40O60508 579 aaKnown RBP eCLIP11.7□□□□□ -0.54
TNC-203ENST00000423613 CHN1P15882 459 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 SOX6P35712 828 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 POU5F1BQ06416 359 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 CNGA2Q16280 664 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 KLHL17Q6TDP4 642 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 DENND6AQ8IWF6 608 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 ASIC4Q96FT7 647 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 CASS4Q9NQ75 786 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 SCN3BQ9NY72 215 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 SEL1LQ9UBV2 794 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 HERC5Q9UII4 1024 aaKnown RBP11.7□□□□□ -0.54
TNC-203ENST00000423613 HEG1Q9ULI3 1381 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 TRIM49BA6NDI0 452 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 MAPK11Q15759 364 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 CCDC60Q8IWA6 550 aaPredicted RBP11.7□□□□□ -0.54
TNC-203ENST00000423613 VPS50Q96JG6 964 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 CLEC4MQ9H2X3 399 aaPredicted RBP11.7□□□□□ -0.54
TNC-203ENST00000423613 RERGLQ9H628 205 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 ZFYVE16Q7Z3T8 1539 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 MCAMP43121 646 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 ARL4CP56559 192 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 TOB2Q14106 344 aaPredicted RBP11.7□□□□□ -0.54
TNC-203ENST00000423613 SLC27A3Q5K4L6 730 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 FAM117BQ6P1L5 589 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 RRM2BQ7LG56 351 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 UBASH3BQ8TF42 649 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 FAM210AQ96ND0 272 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 CCT8L2Q96SF2 557 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms