RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 ZDHHC14Q8IZN3 488 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 DAW1Q8N136 415 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 TDRD5Q8NAT2 981 aaKnown RBP9.47□□□□□ -0.89
MDC1-204ENST00000422266 TMEM161BQ8NDZ6 487 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 BCL7CQ8WUZ0 217 aaPredicted RBP9.47□□□□□ -0.89
MDC1-204ENST00000422266 AUTS2Q8WXX7 1259 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 PIK3R5Q8WYR1 880 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 LARP4BQ92615 738 aaKnown RBP9.47□□□□□ -0.89
MDC1-204ENST00000422266 SNX21Q969T3 373 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 BICD1Q96G01 975 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 PRRX2Q99811 253 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 KIFC3Q9BVG8 833 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 LRRC27Q9C0I9 530 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 PTPRHQ9HD43 1115 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 SEL1LQ9UBV2 794 aa9.47□□□□□ -0.89
MDC1-204ENST00000422266 SRPRBQ9Y5M8 271 aaKnown RBP9.47□□□□□ -0.89
MDC1-204ENST00000422266 CASTOR2A6NHX0 329 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 PTGESO14684 152 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 STX6O43752 255 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 B4GALT3O60512 393 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 MAPTP10636 758 aaKnown RBP9.46□□□□□ -0.9
MDC1-204ENST00000422266 KCNE1P15382 129 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 PROZP22891 400 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 MATR3P43243 847 aaKnown RBP eCLIP9.46□□□□□ -0.9
MDC1-204ENST00000422266 LIG4P49917 911 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 ZNF131P52739 623 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 NCKAP1LP55160 1127 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 RBM10P98175 930 aaKnown RBP9.46□□□□□ -0.9
MDC1-204ENST00000422266 MCL1Q07820 350 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 MAPK7Q13164 816 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 MTMR3Q13615 1198 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 UVSSAQ2YD98 709 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 XKR4Q5GH76 650 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 CCDC73Q6ZRK6 1079 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 ANKS3Q6ZW76 656 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 KCNK18Q7Z418 384 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 BMP8AQ7Z5Y6 402 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 GPBP1Q86WP2 473 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 CD302Q8IX05 232 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 MYCT1Q8N699 235 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 RIN2Q8WYP3 895 aaPredicted RBP9.46□□□□□ -0.9
MDC1-204ENST00000422266 RAD54LQ92698 747 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 NXPE3Q969Y0 559 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 ZNF396Q96N95 335 aaPredicted RBP9.46□□□□□ -0.9
MDC1-204ENST00000422266 PNMA5Q96PV4 448 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 PPP1R10Q96QC0 940 aaKnown RBP9.46□□□□□ -0.9
MDC1-204ENST00000422266 TARS2Q9BW92 718 aaKnown RBP9.46□□□□□ -0.9
MDC1-204ENST00000422266 VN1R3Q9BXE9 311 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 OXCT2Q9BYC2 517 aaPredicted RBP9.46□□□□□ -0.9
MDC1-204ENST00000422266 GPR62Q9BZJ7 368 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 CDT1Q9H211 546 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 MAN1C1Q9NR34 630 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 TSHZ2Q9NRE2 1034 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 MUTYHQ9UIF7 546 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 SORCS3Q9UPU3 1222 aa9.46□□□□□ -0.9
MDC1-204ENST00000422266 SMIM28A0A1B0GU29 152 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 CCDC195A0A1B0GUA6 201 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 ARHGEF37A1IGU5 675 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 TTLL13PA6NNM8 815 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 SFI1A8K8P3 1242 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 HNRNPDLO14979 420 aaKnown RBP9.45□□□□□ -0.9
MDC1-204ENST00000422266 SYN3O14994 580 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 TRAK2O60296 914 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 KIF4AO95239 1232 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 CLTAP09496 248 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 HNRNPA1P09651 372 aaKnown RBP eCLIP9.45□□□□□ -0.9
MDC1-204ENST00000422266 PLCG1P19174 1290 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 HOXA9P31269 272 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 ZXDAP98168 799 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 POU5F1Q01860 360 aaKnown RBP9.45□□□□□ -0.9
MDC1-204ENST00000422266 SIGLEC14Q08ET2 396 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 RAD51AP2Q09MP3 1159 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 POSTNQ15063 836 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 PTPN21Q16825 1174 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 UPP1Q16831 310 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 LIN9Q5TKA1 542 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 FAM171A1Q5VUB5 890 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 RRAGBQ5VZM2 374 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 EEF1DP3Q658K8 133 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 ATL3Q6DD88 541 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 SLFN12LQ6IEE8 588 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 ALKAL1Q6UXT8 129 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 TMC5Q6UXY8 1006 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 TRIM67Q6ZTA4 783 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 SV2BQ7L1I2 683 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 HAUS6Q7Z4H7 955 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 CEP57Q86XR8 500 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 SUGP1Q8IWZ8 645 aaKnown RBP9.45□□□□□ -0.9
MDC1-204ENST00000422266 KHSRPQ92945 711 aaKnown RBP eCLIP9.45□□□□□ -0.9
MDC1-204ENST00000422266 HVCN1Q96D96 273 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 SNX27Q96L92 541 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 PLIN2Q99541 437 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 REEP2Q9BRK0 252 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 APOL5Q9BWW9 433 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 POMKQ9H5K3 350 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 PIDD1Q9HB75 910 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.45□□□□□ -0.9
MDC1-204ENST00000422266 CNTN3Q9P232 1028 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 ANKFY1Q9P2R3 1169 aa9.45□□□□□ -0.9
MDC1-204ENST00000422266 EXOC7Q9UPT5 735 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms