RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ZBTB45Q96K62 511 aaPredicted RBP18.05■□□□□ 0.48
LINC00404-201ENST00000418660 RPGRIP1Q96KN7 1286 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 FBXL18Q96ME1 805 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 RIPOR3Q96MK2 946 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 CLIC6Q96NY7 704 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 NECTIN4Q96NY8 510 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 ACAP3Q96P50 834 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 PPP1R10Q96QC0 940 aaKnown RBP18.05■□□□□ 0.48
LINC00404-201ENST00000418660 USP28Q96RU2 1077 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 PARVGQ9HBI0 331 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.05■□□□□ 0.48
LINC00404-201ENST00000418660 SF3B1O75533 1304 aaKnown RBP eCLIP18.04■□□□□ 0.48
LINC00404-201ENST00000418660 SMIM28A0A1B0GU29 152 aa18.04■□□□□ 0.48
LINC00404-201ENST00000418660 TEX28O15482 410 aa18.04■□□□□ 0.48
LINC00404-201ENST00000418660 FAM13AO94988 1023 aa18.04■□□□□ 0.48
LINC00404-201ENST00000418660 KIF4AO95239 1232 aa18.04■□□□□ 0.48
LINC00404-201ENST00000418660 PDIA4P13667 645 aaKnown RBP18.04■□□□□ 0.48
LINC00404-201ENST00000418660 TXLNAP40222 546 aa18.04■□□□□ 0.48
LINC00404-201ENST00000418660 MTHFRP42898 656 aa18.04■□□□□ 0.48
LINC00404-201ENST00000418660 OSTNP61366 133 aa18.04■□□□□ 0.48
LINC00404-201ENST00000418660 GLRA4Q5JXX5 417 aa18.04■□□□□ 0.48
LINC00404-201ENST00000418660 TMEM31Q5JXX7 168 aa18.04■□□□□ 0.48
LINC00404-201ENST00000418660 ALKAL1Q6UXT8 129 aa18.04■□□□□ 0.48
LINC00404-201ENST00000418660 MYCT1Q8N699 235 aa18.04■□□□□ 0.48
LINC00404-201ENST00000418660 B3GALT6Q96L58 329 aa18.04■□□□□ 0.48
LINC00404-201ENST00000418660 UROC1Q96N76 676 aa18.04■□□□□ 0.48
LINC00404-201ENST00000418660 FNIP2Q9P278 1114 aa18.04■□□□□ 0.48
LINC00404-201ENST00000418660 STK17AQ9UEE5 414 aa18.04■□□□□ 0.48
LINC00404-201ENST00000418660 C1RP00736 705 aa18.03■□□□□ 0.48
LINC00404-201ENST00000418660 NASPP49321 788 aaPredicted RBP18.03■□□□□ 0.48
LINC00404-201ENST00000418660 CREMQ03060 361 aa18.03■□□□□ 0.48
LINC00404-201ENST00000418660 ELAVL2Q12926 359 aaKnown RBP18.03■□□□□ 0.48
LINC00404-201ENST00000418660 HERC4Q5GLZ8 1057 aaPredicted RBP18.03■□□□□ 0.48
LINC00404-201ENST00000418660 ATAT1Q5SQI0 421 aa18.03■□□□□ 0.48
LINC00404-201ENST00000418660 RRAGBQ5VZM2 374 aa18.03■□□□□ 0.48
LINC00404-201ENST00000418660 KANK3Q6NY19 840 aa18.03■□□□□ 0.48
LINC00404-201ENST00000418660 DCLRE1AQ6PJP8 1040 aa18.03■□□□□ 0.48
LINC00404-201ENST00000418660 KRI1Q8N9T8 703 aaKnown RBP18.03■□□□□ 0.48
LINC00404-201ENST00000418660 HASPINQ8TF76 798 aa18.03■□□□□ 0.48
LINC00404-201ENST00000418660 RIN2Q8WYP3 895 aaPredicted RBP18.03■□□□□ 0.48
LINC00404-201ENST00000418660 LRFN3Q9BTN0 628 aa18.03■□□□□ 0.48
LINC00404-201ENST00000418660 SFXN1Q9H9B4 322 aa18.03■□□□□ 0.48
LINC00404-201ENST00000418660 C11orf16Q9NQ32 467 aa18.03■□□□□ 0.48
LINC00404-201ENST00000418660 CDH22Q9UJ99 828 aa18.03■□□□□ 0.48
LINC00404-201ENST00000418660 SPDYE4A6NLX3 237 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 TMEM189-UBE2V1I3L0A0 370 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 CLDN3O15551 220 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 TRAK2O60296 914 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 TBCAO75347 108 aaKnown RBP18.02■□□□□ 0.48
LINC00404-201ENST00000418660 GLUD1P00367 558 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 HSP90AA1P07900 732 aaKnown RBP18.02■□□□□ 0.48
LINC00404-201ENST00000418660 HARSP12081 509 aaKnown RBP18.02■□□□□ 0.48
LINC00404-201ENST00000418660 MCL1Q07820 350 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 NOLC1Q14978 699 aaKnown RBP eCLIP18.02■□□□□ 0.48
LINC00404-201ENST00000418660 FAM171A1Q5VUB5 890 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 ELMSAN1Q6PJG2 1045 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 SNX27Q96L92 541 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 TTPALQ9BTX7 342 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 ZHX3Q9H4I2 956 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 POMKQ9H5K3 350 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 SLC38A7Q9NVC3 462 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 ANKFY1Q9P2R3 1169 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 DPP7Q9UHL4 492 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 MUTYHQ9UIF7 546 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 TBX20Q9UMR3 447 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 NR2E1Q9Y466 385 aa18.02■□□□□ 0.48
LINC00404-201ENST00000418660 K7ENM7 598 aa18.01■□□□□ 0.47
LINC00404-201ENST00000418660 WEE2P0C1S8 567 aa18.01■□□□□ 0.47
LINC00404-201ENST00000418660 KCNE1P15382 129 aa18.01■□□□□ 0.47
LINC00404-201ENST00000418660 ABCD1P33897 745 aa18.01■□□□□ 0.47
LINC00404-201ENST00000418660 CLCNKBP51801 687 aa18.01■□□□□ 0.47
LINC00404-201ENST00000418660 STK38Q15208 465 aa18.01■□□□□ 0.47
LINC00404-201ENST00000418660 UPP1Q16831 310 aa18.01■□□□□ 0.47
LINC00404-201ENST00000418660 RTP2Q5QGT7 225 aa18.01■□□□□ 0.47
LINC00404-201ENST00000418660 TMC5Q6UXY8 1006 aa18.01■□□□□ 0.47
LINC00404-201ENST00000418660 GPR149Q86SP6 731 aa18.01■□□□□ 0.47
LINC00404-201ENST00000418660 HDAC7Q8WUI4 952 aa18.01■□□□□ 0.47
LINC00404-201ENST00000418660 PIK3R5Q8WYR1 880 aa18.01■□□□□ 0.47
LINC00404-201ENST00000418660 BICD1Q96G01 975 aa18.01■□□□□ 0.47
LINC00404-201ENST00000418660 DDX27Q96GQ7 796 aaKnown RBP18.01■□□□□ 0.47
LINC00404-201ENST00000418660 ZNF396Q96N95 335 aaPredicted RBP18.01■□□□□ 0.47
LINC00404-201ENST00000418660 MAN1C1Q9NR34 630 aa18.01■□□□□ 0.47
LINC00404-201ENST00000418660 CNTN3Q9P232 1028 aa18.01■□□□□ 0.47
LINC00404-201ENST00000418660 MYH11P35749 1972 aa18■□□□□ 0.47
LINC00404-201ENST00000418660 FAM86C2PA6NEL3 165 aa18■□□□□ 0.47
LINC00404-201ENST00000418660 B3GAT3O94766 335 aa18■□□□□ 0.47
LINC00404-201ENST00000418660 PIGRP01833 764 aa18■□□□□ 0.47
LINC00404-201ENST00000418660 COL9A1P20849 921 aa18■□□□□ 0.47
LINC00404-201ENST00000418660 MATR3P43243 847 aaKnown RBP eCLIP18■□□□□ 0.47
LINC00404-201ENST00000418660 LIG4P49917 911 aa18■□□□□ 0.47
LINC00404-201ENST00000418660 PDXDC1Q6P996 788 aa18■□□□□ 0.47
LINC00404-201ENST00000418660 PRSS55Q6UWB4 352 aaPredicted RBP18■□□□□ 0.47
LINC00404-201ENST00000418660 CCDC73Q6ZRK6 1079 aa18■□□□□ 0.47
LINC00404-201ENST00000418660 SV2BQ7L1I2 683 aa18■□□□□ 0.47
LINC00404-201ENST00000418660 CEP57Q86XR8 500 aa18■□□□□ 0.47
LINC00404-201ENST00000418660 PALB2Q86YC2 1186 aa18■□□□□ 0.47
LINC00404-201ENST00000418660 LINC00301Q8NCQ3 95 aa18■□□□□ 0.47
LINC00404-201ENST00000418660 CMASQ8NFW8 434 aaPredicted RBP18■□□□□ 0.47
LINC00404-201ENST00000418660 ZMAT2Q96NC0 199 aaKnown RBP18■□□□□ 0.47
LINC00404-201ENST00000418660 FIZ1Q96SL8 496 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms